Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth A]SCOP2B SuperfamilyCore histone-like8039340 3001387 SCOP2B (2022-06-29)
G [auth E]SCOP2B SuperfamilyCore histone-like8039340 3001387 SCOP2B (2022-06-29)
H [auth F]SCOP2B SuperfamilyCore histone-like8070545 3001387 SCOP2B (2022-06-29)
D [auth B]SCOP2B SuperfamilyCore histone-like8070545 3001387 SCOP2B (2022-06-29)
E [auth C]SCOP2 FamilyNucleosome core histones8106275 4000793 SCOP2 (2022-06-29)
E [auth C]SCOP2 SuperfamilyCore histone-like8106276 3001387 SCOP2 (2022-06-29)
E [auth C]SCOP2B SuperfamilyCore histone-like8039342 3001387 SCOP2B (2022-06-29)
I [auth G]SCOP2B SuperfamilyCore histone-like8039342 3001387 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth A]PF00125e7scyA1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: PF00125ECOD (1.6)
G [auth E]PF00125e7scyE1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: PF00125ECOD (1.6)
H [auth F]PF15511e7scyF1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: PF15511ECOD (1.6)
D [auth B]PF15511e7scyB1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: PF15511ECOD (1.6)
E [auth C]PF00125,PF16211e7scyC1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: PF00125,PF16211ECOD (1.6)
I [auth G]PF00125,PF16211e7scyG1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: PF00125,PF16211ECOD (1.6)
F [auth D]PF00125e7scyD1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: PF00125ECOD (1.6)
J [auth H]PF00125e7scyH1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: PF00125ECOD (1.6)
KPF00533e7scyK1 A: a/b three-layered sandwichesX: BRCT domain (From Topology)H: BRCT domain (From Topology)T: BRCT domainF: PF00533ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth A],
G [auth E]
PF00125Core histone H2A/H2B/H3/H4 (Histone)Core histone H2A/H2B/H3/H4- Domain
D [auth B],
H [auth F]
PF15511Centromere kinetochore component CENP-T histone fold (CENP-T_C)Centromere kinetochore component CENP-T histone foldCENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly asso ...CENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly associate with CENP-A, but with histone H3 in the centromere region. CENP-T and -W form a hetero-tetramer with CENP-S and -X and bind to a ~100 bp region of nucleosome-free DNA forming a nucleosome-like structure. The DNA-CENP-T-W-S-X complex is likely to be associated with histone H3-containing nucleosomes rather than with CENP-nucleosomes. This domain is the C-terminal histone fold domain of CENP-T, which associates with chromatin [2-3].
Domain
E [auth C],
I [auth G]
PF16211C-terminus of histone H2A (Histone_H2A_C)C-terminus of histone H2A- Family
E [auth C],
I [auth G]
PF00125Core histone H2A/H2B/H3/H4 (Histone)Core histone H2A/H2B/H3/H4- Domain
F [auth D],
J [auth H]
PF00125Core histone H2A/H2B/H3/H4 (Histone)Core histone H2A/H2B/H3/H4- Domain
PF00533BRCA1 C Terminus (BRCT) domain (BRCT)BRCA1 C Terminus (BRCT) domain- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth I]DNA (147-MER)---
B [auth J]DNA (147-MER)---
C [auth A],
G [auth E]
Histone H3.1
D [auth B],
H [auth F]
Histone H4
E [auth C],
I [auth G]
Histone H2A
F [auth D],
J [auth H]
Histone H2B type 1-J
Poly [ADP-ribose] polymerase 1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth A],
G [auth E]
IPR009072Histone-foldHomologous Superfamily
C [auth A],
G [auth E]
IPR007125Histone H2A/H2B/H3Domain
C [auth A],
G [auth E]
IPR000164Histone H3/CENP-AFamily
D [auth B],
H [auth F]
IPR009072Histone-foldHomologous Superfamily
D [auth B],
H [auth F]
IPR035425CENP-T/Histone H4, histone foldDomain
D [auth B],
H [auth F]
IPR001951Histone H4Family
D [auth B],
H [auth F]
IPR019809Histone H4, conserved siteConserved Site
D [auth B],
H [auth F]
IPR004823TATA box binding protein associated factor (TAF), histone-like fold domainDomain
E [auth C],
I [auth G]
IPR009072Histone-foldHomologous Superfamily
E [auth C],
I [auth G]
IPR007125Histone H2A/H2B/H3Domain
E [auth C],
I [auth G]
IPR002119Histone H2AFamily
E [auth C],
I [auth G]
IPR032454Histone H2A, C-terminal domainDomain
E [auth C],
I [auth G]
IPR032458Histone H2A conserved siteConserved Site
F [auth D],
J [auth H]
IPR009072Histone-foldHomologous Superfamily
F [auth D],
J [auth H]
IPR007125Histone H2A/H2B/H3Domain
F [auth D],
J [auth H]
IPR000558Histone H2BFamily
IPR038650PADR1, C-terminal domain superfamilyHomologous Superfamily
IPR001510Zinc finger, PARP-typeDomain
IPR012982PARP1-like, PADR1 domain, zinc ribbon foldDomain
IPR049296PARP1-like, PADR1 domain, N-terminal helical subdomainDomain
IPR012317Poly(ADP-ribose) polymerase, catalytic domainDomain
IPR036957Zinc finger, PARP-type superfamilyHomologous Superfamily
IPR001357BRCT domainDomain
IPR036930WGR domain superfamilyHomologous Superfamily
IPR008893WGR domainDomain
IPR036420BRCT domain superfamilyHomologous Superfamily
IPR036616Poly(ADP-ribose) polymerase, regulatory domain superfamilyHomologous Superfamily
IPR004102Poly(ADP-ribose) polymerase, regulatory domainDomain
IPR008288Poly [ADP-ribose] polymeraseFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
C [auth A],
G [auth E]
PharosP68431
D [auth B],
H [auth F]
PharosP62805
E [auth C],
I [auth G]
PharosP04908
F [auth D],
J [auth H]
PharosP06899
PharosP09874