7S6B | pdb_00007s6b

Crystal structure of modular polyketide synthase apo-Lsd14 from the Lasalocid biosynthesis pathway, trapped in the transacylation step

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
E	e7s6bE1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: G-gamma	F:	ECOD (20:10:01)
C	e7s6bC1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: G-gamma	F:	ECOD (20:10:01)
D	e7s6bD1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: G-gamma	F:	ECOD (20:10:01)
B	e7s6bB1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: MlaD	F:	ECOD (20:10:01)
A	e7s6bA1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: DUF1870	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
E	1.10.1200.10	Mainly Alpha	Orthogonal Bundle	Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein	Chain A	CATH (utative)
B	3.40.47.10	Alpha Beta	3-Layer(aba) Sandwich	Peroxisomal Thiolase	Chain A, domain 1	CATH (utative)
A	3.40.47.10	Alpha Beta	3-Layer(aba) Sandwich	Peroxisomal Thiolase	Chain A, domain 1	CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
E	Polyketide synthase	vitamin binding modified amino acid binding binding ion binding anion binding phosphopantetheine binding sulfur compound binding small molecule binding acyltransferase activity 3-oxoacyl-[acyl-carrier-protein] synthase activity acyltransferase activity, transferring groups other than amino-acyl groups transferase activity catalytic activity fatty acid synthase activity	fatty acid metabolic process monocarboxylic acid biosynthetic process small molecule biosynthetic process oxoacid metabolic process carboxylic acid metabolic process lipid biosynthetic process primary metabolic process organic acid biosynthetic process organic acid metabolic process fatty acid biosynthetic process carboxylic acid biosynthetic process biosynthetic process small molecule metabolic process metabolic process fatty acid metabolic process monocarboxylic acid biosynthetic process small molecule biosynthetic process oxoacid metabolic process carboxylic acid metabolic process lipid biosynthetic process primary metabolic process organic acid biosynthetic process organic acid metabolic process fatty acid biosynthetic process carboxylic acid biosynthetic process biosynthetic process small molecule metabolic process metabolic process cellular process monocarboxylic acid metabolic process lipid metabolic process macrolide biosynthetic process polyketide metabolic process macrolide metabolic process secondary metabolic process antibiotic biosynthetic process antibiotic metabolic process polyketide biosynthetic process secondary metabolite biosynthetic process lactone metabolic process lactone biosynthetic process	-
C, D	Polyketide synthase	vitamin binding modified amino acid binding binding ion binding anion binding phosphopantetheine binding sulfur compound binding small molecule binding acyltransferase activity 3-oxoacyl-[acyl-carrier-protein] synthase activity acyltransferase activity, transferring groups other than amino-acyl groups transferase activity catalytic activity fatty acid synthase activity	fatty acid metabolic process monocarboxylic acid biosynthetic process small molecule biosynthetic process oxoacid metabolic process carboxylic acid metabolic process lipid biosynthetic process primary metabolic process organic acid biosynthetic process organic acid metabolic process fatty acid biosynthetic process carboxylic acid biosynthetic process biosynthetic process small molecule metabolic process metabolic process fatty acid metabolic process monocarboxylic acid biosynthetic process small molecule biosynthetic process oxoacid metabolic process carboxylic acid metabolic process lipid biosynthetic process primary metabolic process organic acid biosynthetic process organic acid metabolic process fatty acid biosynthetic process carboxylic acid biosynthetic process biosynthetic process small molecule metabolic process metabolic process cellular process monocarboxylic acid metabolic process lipid metabolic process macrolide biosynthetic process polyketide metabolic process macrolide metabolic process secondary metabolic process antibiotic biosynthetic process antibiotic metabolic process polyketide biosynthetic process secondary metabolite biosynthetic process lactone metabolic process lactone biosynthetic process	-
A, B	Polyketide synthase	vitamin binding modified amino acid binding binding ion binding anion binding phosphopantetheine binding sulfur compound binding small molecule binding acyltransferase activity 3-oxoacyl-[acyl-carrier-protein] synthase activity acyltransferase activity, transferring groups other than amino-acyl groups transferase activity catalytic activity fatty acid synthase activity	fatty acid metabolic process monocarboxylic acid biosynthetic process small molecule biosynthetic process oxoacid metabolic process carboxylic acid metabolic process lipid biosynthetic process primary metabolic process organic acid biosynthetic process organic acid metabolic process fatty acid biosynthetic process carboxylic acid biosynthetic process biosynthetic process small molecule metabolic process metabolic process fatty acid metabolic process monocarboxylic acid biosynthetic process small molecule biosynthetic process oxoacid metabolic process carboxylic acid metabolic process lipid biosynthetic process primary metabolic process organic acid biosynthetic process organic acid metabolic process fatty acid biosynthetic process carboxylic acid biosynthetic process biosynthetic process small molecule metabolic process metabolic process cellular process monocarboxylic acid metabolic process lipid metabolic process macrolide biosynthetic process polyketide metabolic process macrolide metabolic process secondary metabolic process antibiotic biosynthetic process antibiotic metabolic process polyketide biosynthetic process secondary metabolite biosynthetic process lactone metabolic process lactone biosynthetic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
E	IPR016035	Acyl transferase/acyl hydrolase/lysophospholipase	Homologous Superfamily
E	IPR015083	Polyketide synthase NorB/C/GfsB-E-like, docking domain	Domain
E	IPR006162	Phosphopantetheine attachment site	PTM
E	IPR057326	Ketoreductase domain	Domain
E	IPR014030	Beta-ketoacyl synthase-like, N-terminal domain	Domain
E	IPR016036	Malonyl-CoA ACP transacylase, ACP-binding	Homologous Superfamily
E	IPR050091	Polyketide and Nonribosomal Peptide Biosynthesis Enzymes	Family
E	IPR020841	Polyketide synthase, beta-ketoacyl synthase domain	Domain
E	IPR036736	ACP-like superfamily	Homologous Superfamily
E	IPR014043	Acyl transferase domain	Domain
E	IPR014031	Beta-ketoacyl synthase, C-terminal domain	Domain
E	IPR041618	Polyketide synthase dimerisation element domain	Domain
E	IPR032821	Polyketide synthase, C-terminal extension	Domain
E	IPR009081	Phosphopantetheine binding ACP domain	Domain
E	IPR020806	Polyketide synthase-like, phosphopantetheine-binding domain	Domain
E	IPR036299	Polyketide synthase, docking domain superfmaily	Homologous Superfamily
E	IPR013968	Polyketide synthase-like, ketoreductase domain	Domain
E	IPR016039	Thiolase-like	Homologous Superfamily
E	IPR001227	Acyl transferase domain superfamily	Homologous Superfamily
E	IPR036291	NAD(P)-binding domain superfamily	Homologous Superfamily
E	IPR018201	Beta-ketoacyl synthase, active site	Active Site
C, D	IPR016035	Acyl transferase/acyl hydrolase/lysophospholipase	Homologous Superfamily
C, D	IPR015083	Polyketide synthase NorB/C/GfsB-E-like, docking domain	Domain
C, D	IPR006162	Phosphopantetheine attachment site	PTM
C, D	IPR057326	Ketoreductase domain	Domain
C, D	IPR014030	Beta-ketoacyl synthase-like, N-terminal domain	Domain
C, D	IPR016036	Malonyl-CoA ACP transacylase, ACP-binding	Homologous Superfamily
C, D	IPR050091	Polyketide and Nonribosomal Peptide Biosynthesis Enzymes	Family
C, D	IPR020841	Polyketide synthase, beta-ketoacyl synthase domain	Domain
C, D	IPR036736	ACP-like superfamily	Homologous Superfamily
C, D	IPR014043	Acyl transferase domain	Domain
C, D	IPR014031	Beta-ketoacyl synthase, C-terminal domain	Domain
C, D	IPR041618	Polyketide synthase dimerisation element domain	Domain
C, D	IPR032821	Polyketide synthase, C-terminal extension	Domain
C, D	IPR009081	Phosphopantetheine binding ACP domain	Domain
C, D	IPR020806	Polyketide synthase-like, phosphopantetheine-binding domain	Domain
C, D	IPR036299	Polyketide synthase, docking domain superfmaily	Homologous Superfamily
C, D	IPR013968	Polyketide synthase-like, ketoreductase domain	Domain
C, D	IPR016039	Thiolase-like	Homologous Superfamily
C, D	IPR001227	Acyl transferase domain superfamily	Homologous Superfamily
C, D	IPR036291	NAD(P)-binding domain superfamily	Homologous Superfamily
C, D	IPR018201	Beta-ketoacyl synthase, active site	Active Site
A, B	IPR016035	Acyl transferase/acyl hydrolase/lysophospholipase	Homologous Superfamily
A, B	IPR015083	Polyketide synthase NorB/C/GfsB-E-like, docking domain	Domain
A, B	IPR006162	Phosphopantetheine attachment site	PTM
A, B	IPR057326	Ketoreductase domain	Domain
A, B	IPR014030	Beta-ketoacyl synthase-like, N-terminal domain	Domain
A, B	IPR016036	Malonyl-CoA ACP transacylase, ACP-binding	Homologous Superfamily
A, B	IPR050091	Polyketide and Nonribosomal Peptide Biosynthesis Enzymes	Family
A, B	IPR020841	Polyketide synthase, beta-ketoacyl synthase domain	Domain
A, B	IPR036736	ACP-like superfamily	Homologous Superfamily
A, B	IPR014043	Acyl transferase domain	Domain
A, B	IPR014031	Beta-ketoacyl synthase, C-terminal domain	Domain
A, B	IPR041618	Polyketide synthase dimerisation element domain	Domain
A, B	IPR032821	Polyketide synthase, C-terminal extension	Domain
A, B	IPR009081	Phosphopantetheine binding ACP domain	Domain
A, B	IPR020806	Polyketide synthase-like, phosphopantetheine-binding domain	Domain
A, B	IPR036299	Polyketide synthase, docking domain superfmaily	Homologous Superfamily
A, B	IPR013968	Polyketide synthase-like, ketoreductase domain	Domain
A, B	IPR016039	Thiolase-like	Homologous Superfamily
A, B	IPR001227	Acyl transferase domain superfamily	Homologous Superfamily
A, B	IPR036291	NAD(P)-binding domain superfamily	Homologous Superfamily
A, B	IPR018201	Beta-ketoacyl synthase, active site	Active Site