7S1H

Wild-type Escherichia coli ribosome with antibiotic linezolid


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth 3]SCOP2B SuperfamilyRibosomal protein S218093436 3002159 SCOP2B (2022-06-29)
I [auth H]SCOP2B SuperfamilyRibosomal protein S68066495 3001323 SCOP2B (2022-06-29)
L [auth K]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8035393 3000334 SCOP2B (2022-06-29)
L [auth K]SCOP2B SuperfamilyNucleic acid-binding proteins8035394 3000135 SCOP2B (2022-06-29)
M [auth L]SCOP2B SuperfamilyTranslational proteins8032955 3000811 SCOP2B (2022-06-29)
U [auth T]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8096018 3001045 SCOP2B (2022-06-29)
EA [auth d]SCOP2B SuperfamilyRibosomal protein L25-like8093520 3001161 SCOP2B (2022-06-29)
FA [auth e]SCOP2B SuperfamilyRibosomal L27 protein-like8096338 3000539 SCOP2B (2022-06-29)
NA [auth m]SCOP2B SuperfamilyRibosomal protein L368093434 3001346 SCOP2B (2022-06-29)
OA [auth n]SCOP2B SuperfamilyRibosomal protein S78077979 3000799 SCOP2B (2022-06-29)
SA [auth r]SCOP2B SuperfamilyTranslational machinery components8093496 3000571 SCOP2B (2022-06-29)
XA [auth x]SCOP2B SuperfamilyRibosomal protein S168097318 3000680 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth 1]Ribosomal_S19e7s1h11 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
B [auth 2]Ribosomal_S20pe7s1h21 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
C [auth 3]Ribosomal_S21e7s1h31 A: extended segmentsX: 30S ribosomal protein S21 (From Topology)H: 30S ribosomal protein S21 (From Topology)T: 30S ribosomal protein S21F: Ribosomal_S21ECOD (1.6)
E [auth D]Ribosomal_S2e7s1hD1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
F [auth E]Ribosomal_S3_Ce7s1hE1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
F [auth E]KH_2_1e7s1hE2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
G [auth F]S4e7s1hF1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
H [auth G]Ribosomal_S5_Ce7s1hG1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
H [auth G]Ribosomal_S5e7s1hG2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
I [auth H]Ribosomal_S6e7s1hH1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
L [auth K]Ribosomal_L2_1e7s1hK2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
L [auth K]Ribosomal_L2_Ce7s1hK1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
M [auth L]Ribosomal_L3e7s1hL1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
N [auth M]Ribosomal_L4e7s1hM1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
O [auth N]Ribosomal_L5_Ce7s1hN1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
P [auth O]Ribosomal_L6e7s1hO2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
P [auth O]Ribosomal_L6_1e7s1hO1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
Q [auth P]Ribosomal_L9_Ne7s1hP2 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
Q [auth P]Ribosomal_L9_C_1e7s1hP1 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: Ribosomal_L9_C_1ECOD (1.6)
R [auth Q]Ribosomal_L31e7s1hQ1 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
S [auth R]Ribosomal_L13e7s1hR1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
T [auth S]Ribosomal_L14e7s1hS1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
U [auth T]Ribosomal_L27Ae7s1hT1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
V [auth U]Ribosomal_L16e7s1hU1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
W [auth V]Ribosomal_L17_1e7s1hV1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
X [auth W]Ribosomal_L18pe7s1hW1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
Y [auth X]Ribosomal_L19e7s1hX1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
Z [auth Y]Ribosomal_L20e7s1hY1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
AA [auth Z]Ribosomal_L21pe7s1hZ1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
BA [auth a]Ribosomal_L22e7s1ha1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
CA [auth b]Ribosomal_L23_2e7s1hb1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
DA [auth c]ribosomal_L24_1e7s1hc1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24_1ECOD (1.6)
EA [auth d]Ribosomal_L25pe7s1hd1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
FA [auth e]Ribosomal_L27e7s1he1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
GA [auth f]Ribosomal_L28e7s1hf1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
HA [auth g]Ribosomal_L29e7s1hg1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
IA [auth h]Ribosomal_L30e7s1hh1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
JA [auth i]Ribosomal_L32pe7s1hi1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
KA [auth j]Ribosomal_L33e7s1hj1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
LA [auth k]Ribosomal_L34e7s1hk1 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
MA [auth l]Ribosomal_L35pe7s1hl1 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
NA [auth m]Ribosomal_L36e7s1hm1 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)
OA [auth n]Ribosomal_S7_1e7s1hn1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
PA [auth o]Ribosomal_S8_Ne7s1ho2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
PA [auth o]Ribosomal_S8_Ce7s1ho1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
RA [auth q]Ribosomal_S10e7s1hq1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
SA [auth r]Ribosomal_S11e7s1hr1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
TA [auth t]Ribosom_S12_S23e7s1ht1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
WA [auth w]Ribosomal_S15_1e7s1hw1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
QA [auth p]Ribosomal_S9e7s1hp1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
UA [auth u]Ribosomal_S13_1e7s1hu1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
VA [auth v]Ribosomal_S14_1e7s1hv1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_1ECOD (1.6)
XA [auth x]Ribosomal_S16e7s1hx1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16ECOD (1.6)
YA [auth y]Ribosomal_S17_1e7s1hy1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
ZA [auth z]Ribosomal_S18e7s1hz1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth 1]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
B [auth 2]PF01649Ribosomal protein S20 (Ribosomal_S20p)Ribosomal protein S20- Family
C [auth 3]PF01165Ribosomal protein S21 (Ribosomal_S21)Ribosomal protein S21- Family
E [auth D]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
F [auth E]PF07650KH domain (KH_2)KH domain- Domain
F [auth E]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
G [auth F]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
G [auth F]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
H [auth G]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
H [auth G]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
I [auth H]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
L [auth K]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
L [auth K]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
M [auth L]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
N [auth M]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
O [auth N]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
O [auth N]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
P [auth O]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
Q [auth P]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
Q [auth P]PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domain- Domain
R [auth Q]PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
S [auth R]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
T [auth S]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
U [auth T]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
V [auth U]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
W [auth V]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
X [auth W]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
Y [auth X]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
Z [auth Y]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
AA [auth Z]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
BA [auth a]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
CA [auth b]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
DA [auth c]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
DA [auth c]PF00467KOW motif (KOW)KOW motif- Family
EA [auth d]PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.Domain
FA [auth e]PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
GA [auth f]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
HA [auth g]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
IA [auth h]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
JA [auth i]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
KA [auth j]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
LA [auth k]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
MA [auth l]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
NA [auth m]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36- Domain
OA [auth n]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
PA [auth o]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
RA [auth q]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
SA [auth r]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
TA [auth t]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
WA [auth w]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
QA [auth p]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
UA [auth u]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
VA [auth v]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
XA [auth x]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
YA [auth y]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
ZA [auth z]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 1]30S ribosomal protein S19
B [auth 2]30S ribosomal protein S20
C [auth 3]30S ribosomal protein S21
D [auth C]16S rRNA---
E [auth D]30S ribosomal protein S2
F [auth E]30S ribosomal protein S3
G [auth F]30S ribosomal protein S4
H [auth G]30S ribosomal protein S5
I [auth H]30S ribosomal protein S6
J [auth I]23S rRNA---
K [auth J]5S rRNA---
L [auth K]50S ribosomal protein L2
M [auth L]50S ribosomal protein L3
N [auth M]50S ribosomal protein L4
O [auth N]50S ribosomal protein L5
P [auth O]50S ribosomal protein L6
Q [auth P]50S ribosomal protein L9
R [auth Q]50S ribosomal protein L31
S [auth R]50S ribosomal protein L13
T [auth S]50S ribosomal protein L14
U [auth T]50S ribosomal protein L15
V [auth U]50S ribosomal protein L16
W [auth V]50S ribosomal protein L17
X [auth W]50S ribosomal protein L18
Y [auth X]50S ribosomal protein L19
Z [auth Y]50S ribosomal protein L20
AA [auth Z]50S ribosomal protein L21
BA [auth a]50S ribosomal protein L22
CA [auth b]50S ribosomal protein L23
DA [auth c]50S ribosomal protein L24
EA [auth d]50S ribosomal protein L25
FA [auth e]50S ribosomal protein L27
GA [auth f]50S ribosomal protein L28
HA [auth g]50S ribosomal protein L29
IA [auth h]50S ribosomal protein L30
JA [auth i]50S ribosomal protein L32
KA [auth j]50S ribosomal protein L33
LA [auth k]50S ribosomal protein L34
MA [auth l]50S ribosomal protein L35
NA [auth m]50S ribosomal protein L36
OA [auth n]30S ribosomal protein S7
PA [auth o]30S ribosomal protein S8
RA [auth q]30S ribosomal protein S10
SA [auth r]30S ribosomal protein S11
TA [auth t]30S ribosomal protein S12
WA [auth w]30S ribosomal protein S15
QA [auth p]30S ribosomal protein S9
UA [auth u]30S ribosomal protein S13
VA [auth v]30S ribosomal protein S14
XA [auth x]30S ribosomal protein S16
YA [auth y]30S ribosomal protein S17
ZA [auth z]30S ribosomal protein S18

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth 1]IPR002222Small ribosomal subunit protein uS19Family
A [auth 1]IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
A [auth 1]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
A [auth 1]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
B [auth 2]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
B [auth 2]IPR002583Small ribosomal subunit protein bS20Family
C [auth 3]IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
C [auth 3]IPR018278Small ribosomal subunit protein bS21, conserved siteConserved Site
C [auth 3]IPR001911Small ribosomal subunit protein bS21Family
E [auth D]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
E [auth D]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
E [auth D]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
E [auth D]IPR001865Small ribosomal subunit protein uS2Family
F [auth E]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
F [auth E]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
F [auth E]IPR004087K Homology domainDomain
F [auth E]IPR004044K Homology domain, type 2Domain
F [auth E]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
F [auth E]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
F [auth E]IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
F [auth E]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
G [auth F]IPR002942RNA-binding S4 domainDomain
G [auth F]IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
G [auth F]IPR022801Small ribosomal subunit protein uS4Family
G [auth F]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
G [auth F]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
G [auth F]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
H [auth G]IPR000851Small ribosomal subunit protein uS5Family
H [auth G]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
H [auth G]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
H [auth G]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
H [auth G]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
H [auth G]IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
H [auth G]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
I [auth H]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
I [auth H]IPR000529Small ribosomal subunit protein bS6Family
I [auth H]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
I [auth H]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
I [auth H]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
L [auth K]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
L [auth K]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
L [auth K]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
L [auth K]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
L [auth K]IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
L [auth K]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
L [auth K]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
L [auth K]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
L [auth K]IPR002171Large ribosomal subunit protein uL2Family
M [auth L]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
M [auth L]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
M [auth L]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
M [auth L]IPR000597Large ribosomal subunit protein uL3Family
N [auth M]IPR013005Large ribosomal subunit protein uL4-likeFamily
N [auth M]IPR002136Large ribosomal subunit protein uL4Family
N [auth M]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
O [auth N]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
O [auth N]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
O [auth N]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
O [auth N]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
O [auth N]IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
O [auth N]IPR002132Large ribosomal subunit protein uL5Family
P [auth O]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
P [auth O]IPR019906Large ribosomal subunit protein uL6, bacterial-typeFamily
P [auth O]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
P [auth O]IPR000702Large ribosomal subunit protein uL6-likeFamily
P [auth O]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
Q [auth P]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
Q [auth P]IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
Q [auth P]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
Q [auth P]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
Q [auth P]IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
Q [auth P]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
Q [auth P]IPR000244Large ribosomal subunit protein bL9Family
R [auth Q]IPR002150Large ribosomal subunit protein bL31 type A/BFamily
R [auth Q]IPR027491Large ribosomal subunit protein bL31 type AFamily
R [auth Q]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
R [auth Q]IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
S [auth R]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
S [auth R]IPR005822Large ribosomal subunit protein uL13Family
S [auth R]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
S [auth R]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
T [auth S]IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
T [auth S]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
T [auth S]IPR000218Large ribosomal subunit protein uL14Family
T [auth S]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
U [auth T]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
U [auth T]IPR021131Large ribosomal subunit protein uL15/eL18Domain
U [auth T]IPR030878Large ribosomal subunit protein uL15Family
U [auth T]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
U [auth T]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
V [auth U]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
V [auth U]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
V [auth U]IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
V [auth U]IPR016180Large ribosomal subunit protein uL16 domainDomain
V [auth U]IPR047873Large ribosomal subunit protein uL16Family
W [auth V]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
W [auth V]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
W [auth V]IPR000456Large ribosomal subunit protein bL17Family
X [auth W]IPR005484Large ribosomal subunit protein uL18Family
X [auth W]IPR004389Large ribosomal subunit protein uL18, bacterial-typeFamily
Y [auth X]IPR001857Large ribosomal subunit protein bL19Family
Y [auth X]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
Y [auth X]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
Y [auth X]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Z [auth Y]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
Z [auth Y]IPR005813Large ribosomal subunit protein bL20Family
AA [auth Z]IPR028909Large ribosomal subunit protein bL21-likeFamily
AA [auth Z]IPR001787Large ribosomal subunit protein bL21Family
AA [auth Z]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
AA [auth Z]IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
BA [auth a]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
BA [auth a]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
BA [auth a]IPR001063Large ribosomal subunit protein uL22Family
BA [auth a]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
BA [auth a]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
CA [auth b]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
CA [auth b]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
CA [auth b]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
CA [auth b]IPR013025Large ribosomal subunit protein uL23-likeFamily
DA [auth c]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
DA [auth c]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
DA [auth c]IPR003256Large ribosomal subunit protein uL24Family
DA [auth c]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
DA [auth c]IPR005824KOWDomain
DA [auth c]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
EA [auth d]IPR020055Ribosomal protein bL25, short-formFamily
EA [auth d]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
EA [auth d]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
EA [auth d]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
FA [auth e]IPR001684Large ribosomal subunit protein bL27Family
FA [auth e]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
GA [auth f]IPR001383Large ribosomal subunit protein bL28, bacterial-typeFamily
GA [auth f]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
GA [auth f]IPR026569Large ribosomal subunit protein bL28Family
GA [auth f]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
HA [auth g]IPR001854Large ribosomal subunit protein uL29Family
HA [auth g]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
HA [auth g]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
IA [auth h]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
IA [auth h]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
IA [auth h]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
IA [auth h]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
JA [auth i]IPR002677Large ribosomal subunit protein bL32Family
JA [auth i]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
JA [auth i]IPR044957Large ribosomal subunit protein bL32, bacterial typeFamily
KA [auth j]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
KA [auth j]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
KA [auth j]IPR001705Large ribosomal subunit protein bL33Family
KA [auth j]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
LA [auth k]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
LA [auth k]IPR000271Large ribosomal subunit protein bL34Family
MA [auth l]IPR021137Large ribosomal subunit protein bL35-likeFamily
MA [auth l]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
MA [auth l]IPR001706Large ribosomal subunit protein bL35Family
MA [auth l]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
NA [auth m]IPR000473Large ribosomal subunit protein bL36Family
NA [auth m]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
OA [auth n]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
OA [auth n]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
OA [auth n]IPR000235Small ribosomal subunit protein uS7Family
OA [auth n]IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
OA [auth n]IPR023798Small ribosomal subunit protein uS7 domainDomain
PA [auth o]IPR000630Small ribosomal subunit protein uS8Family
PA [auth o]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
PA [auth o]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
RA [auth q]IPR027486Small ribosomal subunit protein uS10 domainDomain
RA [auth q]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
RA [auth q]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
RA [auth q]IPR001848Small ribosomal subunit protein uS10Family
SA [auth r]IPR001971Small ribosomal subunit protein uS11Family
SA [auth r]IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
SA [auth r]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
SA [auth r]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
TA [auth t]IPR005679Ribosomal protein uS12, bacterial-typeFamily
TA [auth t]IPR006032Small ribosomal subunit protein uS12Family
TA [auth t]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
WA [auth w]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
WA [auth w]IPR000589Small ribosomal subunit protein uS15Family
WA [auth w]IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
QA [auth p]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
QA [auth p]IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
QA [auth p]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
QA [auth p]IPR000754Small ribosomal subunit protein uS9Family
QA [auth p]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
UA [auth u]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
UA [auth u]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
UA [auth u]IPR001892Small ribosomal subunit protein uS13Family
UA [auth u]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
UA [auth u]IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
VA [auth v]IPR001209Small ribosomal subunit protein uS14Family
VA [auth v]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
VA [auth v]IPR023036Small ribosomal subunit protein uS14, bacteria/plastidFamily
XA [auth x]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
XA [auth x]IPR000307Small ribosomal subunit protein bS16Family
XA [auth x]IPR020592Small ribosomal subunit protein bS16, conserved siteConserved Site
YA [auth y]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
YA [auth y]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
YA [auth y]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
YA [auth y]IPR000266Small ribosomal subunit protein uS17Family
ZA [auth z]IPR001648Small ribosomal subunit protein bS18Family
ZA [auth z]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
ZA [auth z]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily