7RXC | pdb_00007rxc

CryoEM structure of KDELR with Legobody


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
D [auth B]SCOP2 FamilyPhosphate binding protein-like 8105368 4000229 SCOP2 (2022-06-29)
D [auth B]SCOP2 FamilyImmunoglobulin-binding protein A modules 8105460 4000790 SCOP2 (2022-06-29)
D [auth B]SCOP2 SuperfamilyType 2 solute binding protein-like 8105369 3000083 SCOP2 (2022-06-29)
D [auth B]SCOP2 SuperfamilyBacterial immunoglobulin/albumin-binding domains 8105461 3001373 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth H]PUFe7rxcH1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PUFECOD (v294.1)
B [auth L]PUFe7rxcL1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PUFECOD (v294.1)
C [auth N]PUFe7rxcN1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PUFECOD (v294.1)
D [auth B]SBP_bac_1e7rxcB1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: SBP_bac_1ECOD (v294.1)
D [auth B]DUF1870e7rxcB2 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: DUF1870ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A [auth H]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
B [auth L]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
C [auth N]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
D [auth B]3.40.190.10 Alpha Beta 3-Layer(aba) Sandwich D-Maltodextrin-Binding Protein domain 2CATH (utative)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
A [auth H]Heavy ChainIGHV5 -maltodextrin-binding protein,immunoglobulin g-bindingprotein a,immunoglobulin g-binding protein g SAbDab (2026-03-27)
B [auth L]Light ChainIGKV8 Kappamaltodextrin-binding protein,immunoglobulin g-bindingprotein a,immunoglobulin g-binding protein g SAbDab (2026-03-27)
C [auth N]Heavy ChainIGHV1 -er lumen protein-retaining receptor 2SAbDab (2026-03-27)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
E [auth K]PF00810ER lumen protein retaining receptor (ER_lumen_recept)ER lumen protein retaining receptor- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth H]Fab_8D3_2 heavy chain---
B [auth L]Fab_8D3_2 light chain---
C [auth N]Nb_KR---
D [auth B]Maltodextrin-binding protein,Immunoglobulin G-binding protein A,Immunoglobulin G-binding protein G - -
E [auth K]ER lumen protein-retaining receptor 2