7RR5

Structure of ribosomal complex bound with Rbg1/Tma46


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
J [auth LG]SCOP2B SuperfamilyL30e-like8063962 3001739 SCOP2B (2022-06-29)
L [auth LI]SCOP2B SuperfamilyRibosomal protein L16p/L10e8101313 3000884 SCOP2B (2022-06-29)
M [auth LJ]SCOP2B SuperfamilyRL5-like8096932 3001709 SCOP2B (2022-06-29)
P [auth LN]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8082481 3000210 SCOP2B (2022-06-29)
T [auth LR]SCOP2B SuperfamilyRibosomal protein L19 (L19e)8077485 3000890 SCOP2B (2022-06-29)
W [auth LU]SCOP2 Family60S Ribosomal protein L22e8105637 4006528 SCOP2 (2022-06-29)
W [auth LU]SCOP2 Superfamily60S Ribosomal protein L22e8105638 3002158 SCOP2 (2022-06-29)
X [auth LV]SCOP2 FamilyRibosomal protein L148105627 4001826 SCOP2 (2022-06-29)
X [auth LV]SCOP2 Superfamily50S Ribosomal protein L14-like8105628 3000433 SCOP2 (2022-06-29)
AA [auth LY]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8076760 3000334 SCOP2B (2022-06-29)
CA [auth La]SCOP2 FamilyRibosomal proteins L15p and L18e8105629 4003555 SCOP2 (2022-06-29)
CA [auth La]SCOP2 SuperfamilyRibosomal proteins L15p and L18e8105630 3001045 SCOP2 (2022-06-29)
DA [auth Lb]SCOP2B SuperfamilyRibosomal protein L29e8096930 3002157 SCOP2B (2022-06-29)
EA [auth Lc]SCOP2B SuperfamilyL30e-like8039862 3001739 SCOP2B (2022-06-29)
GA [auth Le]SCOP2B SuperfamilyRibosomal protein L32e8102036 3000982 SCOP2B (2022-06-29)
KA [auth Li]SCOP2B SuperfamilyRibosomal protein L36e8053115 3002161 SCOP2B (2022-06-29)
MA [auth Lk]SCOP2B SuperfamilyRibosomal L38e protein-like8096924 3002206 SCOP2B (2022-06-29)
RA [auth Lp]SCOP2B SuperfamilyZn-binding ribosomal proteins8103126 3001320 SCOP2B (2022-06-29)
VA [auth SA]SCOP2 FamilyRibosomal protein S2-like8105635 4003744 SCOP2 (2022-06-29)
VA [auth SA]SCOP2 SuperfamilySIS domain/Ribosomal protein S2-like8105636 3001397 SCOP2 (2022-06-29)
WA [auth SB]SCOP2B SuperfamilyRibosomal S3Ae-like8101309 3002166 SCOP2B (2022-06-29)
E [auth LB]SCOP2B SuperfamilyTranslational proteins8096942 3000811 SCOP2B (2022-06-29)
AB [auth SF]SCOP2B SuperfamilyRibosomal protein S78065999 3000799 SCOP2B (2022-06-29)
HB [auth SM]SCOP2B SuperfamilyL30e-like8105620 3001739 SCOP2B (2022-06-29)
JB [auth SO]SCOP2 FamilyRibosomal protein L18p and S118105625 4000555 SCOP2 (2022-06-29)
JB [auth SO]SCOP2 SuperfamilyTranslational machinery components8105626 3000571 SCOP2 (2022-06-29)
LB [auth SQ]SCOP2 FamilyTranslational machinery components8105623 4000951 SCOP2 (2022-06-29)
LB [auth SQ]SCOP2 SuperfamilyRibosomal protein S5 domain 2-like8105624 3000100 SCOP2 (2022-06-29)
NB [auth SS]SCOP2 FamilyRibosomal protein S138105643 4000260 SCOP2 (2022-06-29)
NB [auth SS]SCOP2 SuperfamilyS13-like H2TH domain8105644 3000053 SCOP2 (2022-06-29)
PB [auth SU]SCOP2B SuperfamilyRibosomal protein S108096928 3001336 SCOP2B (2022-06-29)
QB [auth SV]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8053136 3000068 SCOP2B (2022-06-29)
G [auth LD]SCOP2B SuperfamilyTranslational machinery components8096938 3000571 SCOP2B (2022-06-29)
RB [auth SW]SCOP2B SuperfamilyRibosomal protein S88101311 3000709 SCOP2B (2022-06-29)
UB [auth SZ]SCOP2B SuperfamilyWinged helix DNA-binding domain8096934 3000034 SCOP2B (2022-06-29)
VB [auth Sa]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8096936 3000068 SCOP2B (2022-06-29)
XB [auth Sc]SCOP2B SuperfamilyNucleic acid-binding proteins8096944 3000135 SCOP2B (2022-06-29)
YB [auth Sd]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8096926 3000068 SCOP2B (2022-06-29)
ZB [auth Se]SCOP2 FamilyRibosomal protein S30e-like8105639 4005067 SCOP2 (2022-06-29)
ZB [auth Se]SCOP2 SuperfamilyRibosomal protein S30e-like8105640 3002190 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth LG]PF01248e7rr5LG1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
K [auth LH]PF00347e7rr5LH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
L [auth LI]PF00252e7rr5LI1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
M [auth LJ]PF00281,PF00673e7rr5LJ1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
N [auth LL]PF01294e7rr5LL1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: PF01294ECOD (1.6)
O [auth LM]PF00467,PF01929e7rr5LM1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF01929ECOD (1.6)
P [auth LN]PF00827e7rr5LN1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00827ECOD (1.6)
Q [auth LO]PF00572e7rr5LO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
R [auth LP]PF00237e7rr5LP1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
S [auth LQ]PF17135e7rr5LQ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF17135ECOD (1.6)
T [auth LR]PF01280e7rr5LR2 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: PF01280ECOD (1.6)
T [auth LR]PF01280e7rr5LR1 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: PF01280ECOD (1.6)
U [auth LS]F_UNCLASSIFIEDe7rr5LS2 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: F_UNCLASSIFIEDECOD (1.6)
U [auth LS]PF01775e7rr5LS1 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: PF01775ECOD (1.6)
V [auth LT]PF01157e7rr5LT1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01157ECOD (1.6)
W [auth LU]PF01776e7rr5LU1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: PF01776ECOD (1.6)
X [auth LV]PF00238e7rr5LV1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
Y [auth LW]PF01246e7rr5LW1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01246ECOD (1.6)
Z [auth LX]PF00276,PF03939e7rr5LX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276,PF03939ECOD (1.6)
AA [auth LY]PF16906e7rr5LY1 A: beta barrelsX: SH3H: SH3T: SH3F: PF16906ECOD (1.6)
BA [auth LZ]PF01777e7rr5LZ1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01777ECOD (1.6)
CA [auth La]PF00828e7rr5La1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
DA [auth Lb]PF01779e7rr5Lb1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: PF01779ECOD (1.6)
EA [auth Lc]PF01248e7rr5Lc1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
FA [auth Ld]PF01198e7rr5Ld1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: PF01198ECOD (1.6)
GA [auth Le]PF01655e7rr5Le1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: PF01655ECOD (1.6)
HA [auth Lf]PF01247e7rr5Lf1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF01247ECOD (1.6)
IA [auth Lg]PF01199e7rr5Lg1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: PF01199ECOD (1.6)
JA [auth Lh]PF00831e7rr5Lh1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
KA [auth Li]PF01158e7rr5Li1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: PF01158ECOD (1.6)
LA [auth Lj]PF01907e7rr5Lj1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01907ECOD (1.6)
MA [auth Lk]PF01781e7rr5Lk1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: PF01781ECOD (1.6)
D [auth LA]PF00181e7rr5LA2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
D [auth LA]PF03947e7rr5LA1 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
NA [auth Ll]PF00832e7rr5Ll1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: PF00832ECOD (1.6)
OA [auth Lm]PF01020e7rr5Lm1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01020ECOD (1.6)
PA [auth Ln]PF05162e7rr5Ln1 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: PF05162ECOD (1.6)
QA [auth Lo]PF00935e7rr5Lo1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00935ECOD (1.6)
RA [auth Lp]PF01780e7rr5Lp1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01780ECOD (1.6)
SA [auth P0]PF00466e7rr5P02 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: PF00466ECOD (1.6)
SA [auth P0]PF17777e7rr5P01 A: a+b two layersX: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)H: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)T: Insertion domain in 60S ribosomal protein rpP0 (L10P)F: PF17777ECOD (1.6)
TA [auth P2]PF00298e7rr5P21 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: PF00298ECOD (1.6)
VA [auth SA]PF00318e7rr5SA1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
WA [auth SB]PF01015e7rr5SB2 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: PF01015ECOD (1.6)
WA [auth SB]PF01015e7rr5SB1 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: PF01015ECOD (1.6)
E [auth LB]PF00297e7rr5LB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
XA [auth SC]PF03719e7rr5SC3 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
XA [auth SC]PF00333e7rr5SC2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
XA [auth SC]PF00333e7rr5SC1 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: PF00333ECOD (1.6)
YA [auth SD]PF00189e7rr5SD2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: PF00189ECOD (1.6)
YA [auth SD]PF07650e7rr5SD1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF07650ECOD (1.6)
ZA [auth SE]PF00900e7rr5SE2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00900ECOD (1.6)
ZA [auth SE]PF00467,PF16121e7rr5SE1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF16121ECOD (1.6)
ZA [auth SE]PF00900,PF01479,PF08071e7rr5SE3 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00900,PF01479,PF08071ECOD (1.6)
AB [auth SF]PF00177e7rr5SF1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
BB [auth SG]PF01092e7rr5SG1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: PF01092ECOD (1.6)
CB [auth SH]PF01251e7rr5SH1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: PF01251ECOD (1.6)
DB [auth SI]PF01201e7rr5SI1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF01201ECOD (1.6)
EB [auth SJ]PF00163,PF01479e7rr5SJ1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00163,PF01479ECOD (1.6)
FB [auth SK]PF03501e7rr5SK1 A: alpha arraysX: HTHH: HTHT: wingedF: PF03501ECOD (1.6)
GB [auth SL]PF00366,PF16205e7rr5SL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366,PF16205ECOD (1.6)
F [auth LC]PF00573e7rr5LC1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
F [auth LC]PF14374e7rr5LC2 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: PF14374ECOD (1.6)
HB [auth SM]PF01248e7rr5SM1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
IB [auth SN]PF08069e7rr5SN1 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: PF08069ECOD (1.6)
IB [auth SN]PF00312e7rr5SN2 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
JB [auth SO]PF00411e7rr5SO1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
KB [auth SP]PF00203e7rr5SP1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: PF00203ECOD (1.6)
LB [auth SQ]PF00380e7rr5SQ1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
MB [auth SR]PF00833e7rr5SR1 A: alpha arraysX: HTHH: HTHT: FF domainF: PF00833ECOD (1.6)
NB [auth SS]PF00416e7rr5SS1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: PF00416ECOD (1.6)
OB [auth ST]PF01090e7rr5ST1 A: alpha arraysX: HTHH: HTHT: wingedF: PF01090ECOD (1.6)
PB [auth SU]PF00338e7rr5SU1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
QB [auth SV]PF01249e7rr5SV1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: PF01249ECOD (1.6)
G [auth LD]PF14204,PF17144e7rr5LD1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF14204,PF17144ECOD (1.6)
RB [auth SW]PF00410e7rr5SW2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: PF00410ECOD (1.6)
RB [auth SW]PF00410e7rr5SW1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: PF00410ECOD (1.6)
SB [auth SX]PF00164e7rr5SX1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
TB [auth SY]PF01282e7rr5SY1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF01282ECOD (1.6)
UB [auth SZ]PF03297e7rr5SZ1 A: alpha arraysX: HTHH: HTHT: wingedF: PF03297ECOD (1.6)
VB [auth Sa]PF01283e7rr5Sa1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01283ECOD (1.6)
WB [auth Sb]PF01667e7rr5Sb1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01667ECOD (1.6)
XB [auth Sc]PF01200e7rr5Sc1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF01200ECOD (1.6)
YB [auth Sd]PF00253e7rr5Sd1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
ZB [auth Se]PF04758e7rr5Se1 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: PF04758ECOD (1.6)
AC [auth Sf]PF01599e7rr5Sf1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01599ECOD (1.6)
H [auth LE]PF01159e7rr5LE1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01159ECOD (1.6)
BC [auth Sg]PF00400e7rr5Sg1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 8-bladedF: PF00400ECOD (1.6)
FC [auth 5]PF01287e7rr552 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF01287ECOD (1.6)
FC [auth 5]PF21485e7rr551 A: beta barrelsX: SH3H: SH3T: SH3F: PF21485ECOD (1.6)
GC [auth R]PF02824e7rr5R2 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: PF02824ECOD (1.6)
GC [auth R]PF01926,PF16897e7rr5R1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF01926,PF16897ECOD (1.6)
HC [auth T]F_UNCLASSIFIEDe7rr5T2 A: few secondary structure elementsX: CCCH zinc fingerH: CCCH zinc finger (From Topology)T: CCCH zinc fingerF: F_UNCLASSIFIEDECOD (1.6)
HC [auth T]PF16543e7rr5T1 A: extended segmentsX: Translation machinery-associated protein 46 DFRP domain (From Topology)H: Translation machinery-associated protein 46 DFRP domain (From Topology)T: Translation machinery-associated protein 46 DFRP domainF: PF16543ECOD (1.6)
I [auth LF]PF00327,PF08079e7rr5LF1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327,PF08079ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
J [auth LG]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
K [auth LH]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
L [auth LI]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
M [auth LJ]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
M [auth LJ]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
O [auth LM]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
O [auth LM]PF00467KOW motif (KOW)KOW motif- Family
P [auth LN]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
T [auth LR]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
U [auth LS]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
Y [auth LW]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
AA [auth LY]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
AA [auth LY]PF00467KOW motif (KOW)KOW motif- Family
DA [auth Lb]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
EA [auth Lc]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
GA [auth Le]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
KA [auth Li]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
MA [auth Lk]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
PA [auth Ln]PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
RA [auth Lp]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
TA [auth P2]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
TA [auth P2]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
E [auth LB]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
XA [auth SC]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
XA [auth SC]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
YA [auth SD]PF07650KH domain (KH_2)KH domain- Domain
YA [auth SD]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
AB [auth SF]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
DB [auth SI]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
F [auth LC]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
F [auth LC]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
HB [auth SM]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
KB [auth SP]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
PB [auth SU]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
QB [auth SV]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
G [auth LD]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
G [auth LD]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins.Domain
RB [auth SW]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
UB [auth SZ]PF03297S25 ribosomal protein (Ribosomal_S25)S25 ribosomal protein- Family
VB [auth Sa]PF01283Ribosomal protein S26e (Ribosomal_S26e)Ribosomal protein S26e- Family
WB [auth Sb]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
XB [auth Sc]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28e- Family
YB [auth Sd]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
AC [auth Sf]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
GC [auth R]PF02824TGS domain (TGS)TGS domainThe TGS domain is named after ThrRS, GTPase, and SpoT [1]. Interestingly, TGS domain was detected also at the amino terminus of the uridine kinase from the spirochaete Treponema pallidum (but not any other organism, including the related spirochaete ...The TGS domain is named after ThrRS, GTPase, and SpoT [1]. Interestingly, TGS domain was detected also at the amino terminus of the uridine kinase from the spirochaete Treponema pallidum (but not any other organism, including the related spirochaete Borrelia burgdorferi). TGS is a small domain that consists of ~50 amino acid residues and is predicted to possess a predominantly beta-sheet structure. There is no direct information on the functions of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role [1].
Domain
GC [auth R]PF0192650S ribosome-binding GTPase (MMR_HSR1)50S ribosome-binding GTPase- Family
GC [auth R]PF16897C-terminal region of MMR_HSR1 domain (MMR_HSR1_Xtn)C-terminal region of MMR_HSR1 domain- Family
HC [auth T]PF16543DRG Family Regulatory Proteins, Tma46 (DFRP_C)DRG Family Regulatory Proteins, Tma46DFRP_C is a family of eukaryotic translation machinery-associated protein 46 proteins that are the binding partner for the highly conserved Developmentally Regulated GTP-binding (DRG) GTPases. Thus this family is referred to as DRG Family Regulatory ...DFRP_C is a family of eukaryotic translation machinery-associated protein 46 proteins that are the binding partner for the highly conserved Developmentally Regulated GTP-binding (DRG) GTPases. Thus this family is referred to as DRG Family Regulatory Proteins (DFRP). Binding of this DFRP modulates the function of the GTPase [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth C1]25S rRNA---
J [auth LG]60S ribosomal protein L8-A
K [auth LH]60S ribosomal protein L9-A
L [auth LI]RPL10 isoform 1
M [auth LJ]RPL11B isoform 1
N [auth LL]60S ribosomal protein L13---
O [auth LM]60S ribosomal protein L14-A
P [auth LN]60S ribosomal protein L15-A
Q [auth LO]60S ribosomal protein L16-A---
R [auth LP]60S ribosomal protein L17-A---
S [auth LQ]60S ribosomal protein L18-B---
B [auth C4]5S rRNA---
T [auth LR]60S ribosomal protein L19-A
U [auth LS]60S ribosomal protein L20-A
V [auth LT]60S ribosomal protein L21-A---
W [auth LU]60S ribosomal protein L22-A---
X [auth LV]60S ribosomal protein L23-B---
Y [auth LW]RPL24A isoform 1- - -
Z [auth LX]60S ribosomal protein L25---
AA [auth LY]60S ribosomal protein L26-A
BA [auth LZ]60S ribosomal protein L27---
CA [auth La]60S ribosomal protein L28---
C [auth C3]5.8S rRNA---
DA [auth Lb]RPL29 isoform 1
EA [auth Lc]60S ribosomal protein L30
FA [auth Ld]60S ribosomal protein L31-A---
GA [auth Le]RPL32 isoform 1
HA [auth Lf]60S ribosomal protein L33-A---
IA [auth Lg]60S ribosomal protein L34-A---
JA [auth Lh]60S ribosomal protein L35-A---
KA [auth Li]60S ribosomal protein L36-A
LA [auth Lj]Ribosomal protein L37---
MA [auth Lk]RPL38 isoform 1
D [auth LA]60S ribosomal protein L2-B---
NA [auth Ll]60S ribosomal protein L39---
OA [auth Lm]Ubiquitin-60S ribosomal protein L40---
PA [auth Ln]60S ribosomal protein L41-A
QA [auth Lo]60S ribosomal protein L42-A---
RA [auth Lp]60S ribosomal protein L43-A
SA [auth P0]RPP0 isoform 1---
TA [auth P2]RPL12A isoform 1
UA [auth C2]18S rRNA---
VA [auth SA]40S ribosomal protein S0---
WA [auth SB]RPS1A isoform 1
E [auth LB]RPL3 isoform 1
XA [auth SC]RPS2 isoform 1
YA [auth SD]RPS3 isoform 1
ZA [auth SE]40S ribosomal protein S4---
AB [auth SF]Rps5p
BB [auth SG]40S ribosomal protein S6---
CB [auth SH]40S ribosomal protein S7---
DB [auth SI]RPS8A isoform 1
EB [auth SJ]40S ribosomal protein S9-A---
FB [auth SK]40S ribosomal protein S10-A---
GB [auth SL]40S ribosomal protein S11-B---
F [auth LC]RPL4A isoform 1
HB [auth SM]40S ribosomal protein S12
IB [auth SN]40S ribosomal protein S13---
JB [auth SO]40S ribosomal protein S14-B---
KB [auth SP]RPS15 isoform 1
LB [auth SQ]40S ribosomal protein S16-A---
MB [auth SR]40S ribosomal protein S17-A---
NB [auth SS]40S ribosomal protein S18-B---
OB [auth ST]40S ribosomal protein S19-A---
PB [auth SU]RPS20 isoform 1
QB [auth SV]40S ribosomal protein S21-A
G [auth LD]RPL5 isoform 1
RB [auth SW]RPS22A isoform 1
SB [auth SX]40S ribosomal protein S23---
TB [auth SY]40S ribosomal protein S24---
UB [auth SZ]RPS25A isoform 1- -
VB [auth Sa]RPS26B isoform 1
WB [auth Sb]40S ribosomal protein S27-A
XB [auth Sc]RPS28A isoform 1
YB [auth Sd]RPS29A isoform 1
ZB [auth Se]40S ribosomal protein S30---
AC [auth Sf]Ubiquitin-40S ribosomal protein S31
H [auth LE]60S ribosomal protein L6---
BC [auth Sg]Guanine nucleotide-binding protein subunit beta-like protein---
CC [auth A]A-tRNA---
DC [auth P]P-tRNA---
EC [auth m]mRNA---
FC [auth 5]Eukaryotic translation initiation factor 5A---
GC [auth R]Ribosome-interacting GTPase 1 - -
HC [auth T]Translation machinery-associated protein 46 -
IC [auth L1]60S ribosomal protein L1---
I [auth LF]60S ribosomal protein L7-A---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth LG]IPR001921Large ribosomal subunit protein eL8Family
J [auth LG]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
J [auth LG]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
J [auth LG]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
J [auth LG]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
K [auth LH]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
K [auth LH]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
K [auth LH]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
K [auth LH]IPR000702Large ribosomal subunit protein uL6-likeFamily
L [auth LI]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
L [auth LI]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
L [auth LI]IPR016180Large ribosomal subunit protein uL16 domainDomain
L [auth LI]IPR047873Large ribosomal subunit protein uL16Family
L [auth LI]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
M [auth LJ]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
M [auth LJ]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
M [auth LJ]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
M [auth LJ]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
M [auth LJ]IPR002132Large ribosomal subunit protein uL5Family
O [auth LM]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
O [auth LM]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
O [auth LM]IPR039660Large ribosomal subunit protein eL14Family
O [auth LM]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
O [auth LM]IPR002784Large ribosomal subunit protein eL14 domainDomain
O [auth LM]IPR005824KOWDomain
P [auth LN]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
P [auth LN]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
P [auth LN]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
P [auth LN]IPR000439Large ribosomal subunit protein eL15Family
T [auth LR]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
T [auth LR]IPR039547Large ribosomal subunit protein eL19Family
T [auth LR]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
T [auth LR]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
T [auth LR]IPR000196Large ribosomal subunit protein eL19 domainDomain
T [auth LR]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
U [auth LS]IPR028877Large ribosomal subunit protein eL20Family
U [auth LS]IPR023573Large ribosomal subunit protein eL20 domainDomain
U [auth LS]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
Y [auth LW]IPR000988Large ribosomal subunit protein eL24-relatedFamily
Y [auth LW]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
Y [auth LW]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
AA [auth LY]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
AA [auth LY]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
AA [auth LY]IPR005824KOWDomain
AA [auth LY]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
AA [auth LY]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
AA [auth LY]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
DA [auth Lb]IPR002673Large ribosomal subunit protein eL29Family
EA [auth Lc]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
EA [auth Lc]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
EA [auth Lc]IPR039109Large ribosomal subunit protein eL30-likeFamily
EA [auth Lc]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
GA [auth Le]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
GA [auth Le]IPR001515Large ribosomal subunit protein eL32Family
GA [auth Le]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
KA [auth Li]IPR000509Large ribosomal subunit protein eL36Family
KA [auth Li]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
MA [auth Lk]IPR002675Large ribosomal subunit protein eL38Family
MA [auth Lk]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
PA [auth Ln]IPR007836Large ribosomal subunit protein eS32Family
RA [auth Lp]IPR002674Large ribosomal subunit protein eL43Family
RA [auth Lp]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
RA [auth Lp]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
TA [auth P2]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
TA [auth P2]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
TA [auth P2]IPR000911Ribosomal protein uL11Family
TA [auth P2]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
TA [auth P2]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
TA [auth P2]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
WA [auth SB]IPR001593Small ribosomal subunit protein eS1Family
WA [auth SB]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
WA [auth SB]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
E [auth LB]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
E [auth LB]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
E [auth LB]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
E [auth LB]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
E [auth LB]IPR000597Large ribosomal subunit protein uL3Family
XA [auth SC]IPR000851Small ribosomal subunit protein uS5Family
XA [auth SC]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
XA [auth SC]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
XA [auth SC]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
XA [auth SC]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
XA [auth SC]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
XA [auth SC]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
YA [auth SD]IPR004044K Homology domain, type 2Domain
YA [auth SD]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
YA [auth SD]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
YA [auth SD]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
YA [auth SD]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
YA [auth SD]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
YA [auth SD]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
AB [auth SF]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
AB [auth SF]IPR000235Small ribosomal subunit protein uS7Family
AB [auth SF]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
AB [auth SF]IPR023798Small ribosomal subunit protein uS7 domainDomain
AB [auth SF]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
DB [auth SI]IPR001047Small ribosomal subunit protein eS8Family
DB [auth SI]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotesHomologous Superfamily
DB [auth SI]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
DB [auth SI]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
F [auth LC]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
F [auth LC]IPR002136Large ribosomal subunit protein uL4Family
F [auth LC]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
F [auth LC]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
F [auth LC]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
HB [auth SM]IPR000530Small ribosomal subunit protein eS12Family
HB [auth SM]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
HB [auth SM]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
HB [auth SM]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
KB [auth SP]IPR002222Small ribosomal subunit protein uS19Family
KB [auth SP]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
KB [auth SP]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
KB [auth SP]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
PB [auth SU]IPR001848Small ribosomal subunit protein uS10Family
PB [auth SU]IPR027486Small ribosomal subunit protein uS10 domainDomain
PB [auth SU]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
PB [auth SU]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
PB [auth SU]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
QB [auth SV]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
QB [auth SV]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
QB [auth SV]IPR001931Small ribosomal subunit protein eS21Family
G [auth LD]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
G [auth LD]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
RB [auth SW]IPR000630Small ribosomal subunit protein uS8Family
RB [auth SW]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
RB [auth SW]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
UB [auth SZ]IPR004977Small ribosomal subunit protein eS25Family
UB [auth SZ]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
VB [auth Sa]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
VB [auth Sa]IPR000892Small ribosomal subunit protein eS26Family
VB [auth Sa]IPR047864Ribosomal protein eS26, conserved siteConserved Site
WB [auth Sb]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
WB [auth Sb]IPR000592Small ribosomal subunit protein eS27Family
WB [auth Sb]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
XB [auth Sc]IPR028626Ribosomal protein eS28 conserved siteConserved Site
XB [auth Sc]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
XB [auth Sc]IPR000289Small ribosomal subunit protein eS28Family
YB [auth Sd]IPR001209Small ribosomal subunit protein uS14Family
YB [auth Sd]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
YB [auth Sd]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
YB [auth Sd]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
AC [auth Sf]IPR002906Small ribosomal subunit protein eS31Domain
AC [auth Sf]IPR019956Ubiquitin domainDomain
AC [auth Sf]IPR019954Ubiquitin conserved siteConserved Site
AC [auth Sf]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
AC [auth Sf]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AC [auth Sf]IPR000626Ubiquitin-like domainDomain
AC [auth Sf]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
GC [auth R]IPR031167OBG-type guanine nucleotide-binding (G) domainDomain
GC [auth R]IPR031662GTP binding protein, second domainDomain
GC [auth R]IPR012676TGS-likeHomologous Superfamily
GC [auth R]IPR006074GTP1/OBG, conserved siteConserved Site
GC [auth R]IPR045001Developmentally regulated GTP-binding proteinFamily
GC [auth R]IPR004095TGSDomain
GC [auth R]IPR005225Small GTP-binding protein domainDomain
GC [auth R]IPR012675Beta-grasp domain superfamilyHomologous Superfamily
GC [auth R]IPR006073GTP binding domainDomain
GC [auth R]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
HC [auth T]IPR036855Zinc finger, CCCH-type superfamilyHomologous Superfamily
HC [auth T]IPR032378ZC3H15/TMA46 family, C-terminalDomain
HC [auth T]IPR000571Zinc finger, CCCH-typeDomain