Crystal structure of [I11G]cycloviolacin O2
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | AAA_lid_RFC1 | e7rmsB1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: AAA_lid_RFC1 | ECOD (v295.2) |
| A | Ran_BP1 | e7rmsA1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: Ran_BP1 | ECOD (v295.2) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| D-[I11L]cycloviolacin O2 | - | - | ||
| [I11L]cycloviolacin O2 | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR012323 | Cyclotide, bracelet, conserved site | Conserved Site | |
| IPR005535 | Cyclotide | Family | |
| IPR036146 | Cyclotide superfamily | Homologous Superfamily | |
| IPR012323 | Cyclotide, bracelet, conserved site | Conserved Site | |
| IPR005535 | Cyclotide | Family | |
| IPR036146 | Cyclotide superfamily | Homologous Superfamily |
Protein Modification Annotation
| Modified Residue(s) | ||
|---|---|---|
| Chain | Residue(s) | Description |
| DAL | : AA0111 , AA0191 : meso-lanthionine MOD:00120 , D-alanine (Ala) MOD:00198 , D-alanine (Ser) MOD:00858 , D-alanine MOD:00862 | |
| DAR | : AA0111 , AA0191 | |
| DCY | : AA0111 , AA0191 | |
| DGL | : AA0111 , AA0191 | |
| DIL | : AA0111 , AA0191 , AA0192 : meso-lanthionine MOD:00120 , D-alanine (Ala) MOD:00198 , D-alanine (Ser) MOD:00858 , D-alanine MOD:00862 , D-allo-isoleucine MOD:00199 | |
| DLE | : AA0111 , AA0191 , AA0192 , AA0197 : meso-lanthionine MOD:00120 , D-alanine (Ala) MOD:00198 , D-alanine (Ser) MOD:00858 , D-alanine MOD:00862 , D-allo-isoleucine MOD:00199 , D-leucine MOD:00204 | |
| DLY | : AA0111 , AA0191 , AA0192 , AA0197 | |
| DPR | : AA0111 , AA0191 , AA0192 , AA0197 | |
| DSG | : AA0111 , AA0191 , AA0192 , AA0197 , AA0196 , AA0622 : meso-lanthionine MOD:00120 , D-alanine (Ala) MOD:00198 , D-alanine (Ser) MOD:00858 , D-alanine MOD:00862 , D-allo-isoleucine MOD:00199 , D-leucine MOD:00204 , D-asparagine MOD:00203 , 2-(L-cystein-S-yl)-D-asparagine MOD:01985 | |
| DSN | : AA0111 , AA0191 , AA0192 , AA0197 , AA0196 , AA0622 , AA0195 , AA0624 : meso-lanthionine MOD:00120 , D-alanine (Ala) MOD:00198 , D-alanine (Ser) MOD:00858 , D-alanine MOD:00862 , D-allo-isoleucine MOD:00199 , D-leucine MOD:00204 , D-asparagine MOD:00203 , 2-(L-cystein-S-yl)-D-asparagine MOD:01985 , D-serine (Ser) MOD:00202 , D-serine MOD:00891 , D-serine (Cys) MOD:00892 , 2-(L-cystein-S-yl)-D-serine MOD:01987 | |
| DTR | : AA0111 , AA0191 , AA0192 , AA0197 , AA0196 , AA0622 , AA0195 , AA0624 , AA0198 : meso-lanthionine MOD:00120 , D-alanine (Ala) MOD:00198 , D-alanine (Ser) MOD:00858 , D-alanine MOD:00862 , D-allo-isoleucine MOD:00199 , D-leucine MOD:00204 , D-asparagine MOD:00203 , 2-(L-cystein-S-yl)-D-asparagine MOD:01985 , D-serine (Ser) MOD:00202 , D-serine MOD:00891 , D-serine (Cys) MOD:00892 , 2-(L-cystein-S-yl)-D-serine MOD:01987 , D-tryptophan MOD:00205 | |
| DTY | : AA0111 , AA0191 , AA0192 , AA0197 , AA0196 , AA0622 , AA0195 , AA0624 , AA0198 | |
| DVA | : AA0111 , AA0191 , AA0192 , AA0197 , AA0196 , AA0622 , AA0195 , AA0624 , AA0198 , AA0200 : meso-lanthionine MOD:00120 , D-alanine (Ala) MOD:00198 , D-alanine (Ser) MOD:00858 , D-alanine MOD:00862 , D-allo-isoleucine MOD:00199 , D-leucine MOD:00204 , D-asparagine MOD:00203 , 2-(L-cystein-S-yl)-D-asparagine MOD:01985 , D-serine (Ser) MOD:00202 , D-serine MOD:00891 , D-serine (Cys) MOD:00892 , 2-(L-cystein-S-yl)-D-serine MOD:01987 , D-tryptophan MOD:00205 , D-valine MOD:00705 | |