Annotations: 7RM8

Solution NMR structure of PDLIM7 PDZ bound to SNX17 peptide

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A		e7rm8A1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F:	ECOD (v295)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.30.42.10	Mainly Beta	Roll	Pdz3 Domain	PDZ domain	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00595	PDZ domain (PDZ)	PDZ domain	PDZ domains are found in diverse signaling proteins.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Isoform 4 of PDZ and LIM domain protein 7,Sorting nexin-17 fusion	ion binding binding anion binding phosphatidylinositol binding small molecule binding protein binding signaling receptor binding low-density lipoprotein particle receptor binding lipoprotein particle receptor binding cytoskeletal protein binding actin binding alpha-actinin binding actinin binding muscle alpha-actinin binding ion binding binding anion binding phosphatidylinositol binding small molecule binding protein binding signaling receptor binding low-density lipoprotein particle receptor binding lipoprotein particle receptor binding cytoskeletal protein binding actin binding alpha-actinin binding actinin binding muscle alpha-actinin binding cation binding metal ion binding	sterol catabolic process alcohol catabolic process catabolic process lipid catabolic process sterol metabolic process steroid metabolic process cholesterol metabolic process alcohol metabolic process primary metabolic process cholesterol catabolic process secondary alcohol metabolic process steroid catabolic process small molecule metabolic process metabolic process sterol catabolic process alcohol catabolic process catabolic process lipid catabolic process sterol metabolic process steroid metabolic process cholesterol metabolic process alcohol metabolic process primary metabolic process cholesterol catabolic process secondary alcohol metabolic process steroid catabolic process small molecule metabolic process metabolic process cellular process small molecule catabolic process lipid metabolic process regulation of localization import into cell regulation of biological process regulation of cellular process regulation of cellular component organization regulation of transport transport biological regulation regulation of vesicle-mediated transport establishment of localization vesicle-mediated transport cellular component organization localization cellular component organization or biogenesis endocytosis regulation of endocytosis cellular response to stimulus response to stimulus signaling signal transduction cell communication cellular localization establishment of protein localization intracellular transport protein transport establishment of localization in cell macromolecule localization intracellular protein localization intracellular protein transport endosomal transport localization within membrane endocytic recycling vesicle-mediated transport to the plasma membrane developmental process heart development multicellular organism development multicellular organismal process anatomical structure development animal organ development animal gross anatomical part developmental process circulatory system development system development cellular developmental process cell differentiation muscle structure development ossification organelle organization actin cytoskeleton organization actin filament-based process cytoskeleton organization receptor-mediated endocytosis	cellular anatomical structure membrane intracellular anatomical structure cytoplasm cytosol protein-containing complex membrane-bounded organelle intracellular organelle cytoplasmic vesicle organelle intracellular vesicle intracellular membrane-bounded organelle vesicle early endosome cellular anatomical structure membrane intracellular anatomical structure cytoplasm cytosol protein-containing complex membrane-bounded organelle intracellular organelle cytoplasmic vesicle organelle intracellular vesicle intracellular membrane-bounded organelle vesicle early endosome endosome endomembrane system Golgi apparatus endosome membrane cytoplasmic vesicle membrane bounding membrane of organelle vesicle membrane organelle membrane cell-cell junction adherens junction anchoring junction cell junction focal adhesion cell-substrate junction intracellular membraneless organelle Z disc sarcomere I band membraneless organelle contractile muscle fiber supramolecular fiber myofibril supramolecular polymer supramolecular complex cytoskeleton actin cytoskeleton ruffle cell projection cell leading edge plasma membrane bounded cell projection actin filament bundle actomyosin stress fiber contractile actin filament bundle polymeric cytoskeletal fiber actin filament filamentous actin

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR001683	Phox homology	Domain
A	IPR011993	PH-like domain superfamily	Homologous Superfamily
A	IPR037836	SNX17, atypical FERM-like domain	Domain
A	IPR048763	Sortin nexin 17/31, FERM domain, F1 lobe	Domain
A	IPR000159	Ras-associating domain	Domain
A	IPR028666	Sorting nexin-17, FERM domain, N-terminal subdomain	Domain
A	IPR040842	Sorting nexin-17/31, FERM domain	Domain
A	IPR036871	PX domain superfamily	Homologous Superfamily
A	IPR048767	Sortin nexin 17/31, FERM domain, F2 lobe	Domain
A	IPR050604	PDZ and LIM domain-containing	Family
A	IPR036034	PDZ superfamily	Homologous Superfamily
A	IPR001478	PDZ domain	Domain
A	IPR001781	Zinc finger, LIM-type	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	: Q9NR12	Crohn disease ovarian cancer atypical teratoid rhabdoid tumor dermatomyositis glioblastoma malignant glioma osteosarcoma psoriasis chronic kidney disease gastric carcinoma interstitial lung disease Malignant neoplasm of breast pancreatic ductal adenocarcinoma rheumatoid arthritis chronic obstructive pulmonary disease Crohn disease ovarian cancer atypical teratoid rhabdoid tumor dermatomyositis glioblastoma malignant glioma osteosarcoma psoriasis chronic kidney disease gastric carcinoma interstitial lung disease Malignant neoplasm of breast pancreatic ductal adenocarcinoma rheumatoid arthritis chronic obstructive pulmonary disease Gaucher disease malignant colon neoplasm malignant pancreatic neoplasm polycystic ovary syndrome sinusitis

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.