7RHZ | pdb_00007rhz

Heterodimer of Cre recombinase mutants D33A/A36V/R192A and R72E/L115D/R119D in complex with loxP DNA.

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	DNA breaking-rejoining enzymes	8040148	3001127	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	lambda integrase clamp domain-like	8040147	3000550	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	DNA breaking-rejoining enzymes	8040148	3001127	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	lambda integrase clamp domain-like	8040147	3000550	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	INT_Cre_C	e7rhzB2	A: alpha arrays	X: HTH	H: HTH	T: DNA breaking-rejoining enzymes	F: INT_Cre_C	ECOD (1.6)
B	Phage_integrase_N	e7rhzB1	A: alpha arrays	X: HTH	H: HTH	T: DNA breaking-rejoining enzymes	F: Phage_integrase_N	ECOD (1.6)
B	Phage_int_SAM_4	e7rhzB3	A: alpha arrays	X: lambda integrase-N-like	H: lambda integrase-N (From Topology)	T: lambda integrase-N	F: Phage_int_SAM_4	ECOD (1.6)
A	INT_Cre_C	e7rhzA2	A: alpha arrays	X: HTH	H: HTH	T: DNA breaking-rejoining enzymes	F: INT_Cre_C	ECOD (1.6)
A	Phage_integrase_N	e7rhzA1	A: alpha arrays	X: HTH	H: HTH	T: DNA breaking-rejoining enzymes	F: Phage_integrase_N	ECOD (1.6)
A	Phage_int_SAM_4	e7rhzA3	A: alpha arrays	X: lambda integrase-N-like	H: lambda integrase-N (From Topology)	T: lambda integrase-N	F: Phage_int_SAM_4	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B	PF00589	Phage integrase family (Phage_integrase)	Phage integrase family	-	Family
A	PF00589	Phage integrase family (Phage_integrase)	Phage integrase family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
D	DNA (44-MER)	-	-	-
C	DNA (44-MER)	-	-	-
B	Recombinase cre	DNA binding binding nucleic acid binding	nucleobase-containing compound metabolic process metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process DNA integration nucleic acid metabolic process DNA recombination	-
A	Recombinase cre	DNA binding binding nucleic acid binding	nucleobase-containing compound metabolic process metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process DNA integration nucleic acid metabolic process DNA recombination	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B	IPR011010	DNA breaking-rejoining enzyme, catalytic core	Homologous Superfamily
B	IPR010998	Integrase/recombinase, N-terminal	Homologous Superfamily
B	IPR052925	Phage Integrase-like Recombinase	Family
B	IPR044068	Core-binding (CB) domain	Domain
B	IPR002104	Integrase, catalytic domain	Domain
B	IPR013762	Integrase-like, catalytic domain superfamily	Homologous Superfamily
A	IPR011010	DNA breaking-rejoining enzyme, catalytic core	Homologous Superfamily
A	IPR010998	Integrase/recombinase, N-terminal	Homologous Superfamily
A	IPR052925	Phage Integrase-like Recombinase	Family
A	IPR044068	Core-binding (CB) domain	Domain
A	IPR002104	Integrase, catalytic domain	Domain
A	IPR013762	Integrase-like, catalytic domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.