7RCH
Crystal structure of NS1-ED of Vietnam influenza A virus in complex with the p85-beta-iSH2 domain of human PI3K
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
D | SCOP2B Superfamily | PI3K inter-SH2 coiled-coil domain | 8052379 | 3002111 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00600 | e7rchA1 | A: mixed a+b and a/b | X: Ns1 effector domain-like (From Topology) | H: Ns1 effector domain-like (From Topology) | T: Ns1 effector domain-like | F: PF00600 | ECOD (1.6) |
C [auth B] | PF00600 | e7rchB1 | A: mixed a+b and a/b | X: Ns1 effector domain-like (From Topology) | H: Ns1 effector domain-like (From Topology) | T: Ns1 effector domain-like | F: PF00600 | ECOD (1.6) |
B [auth C] | PF16454 | e7rchC1 | A: alpha bundles | X: YscO-like | H: Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain (From Topology) | T: Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | F: PF16454 | ECOD (1.6) |
D | PF16454 | e7rchD1 | A: alpha bundles | X: YscO-like | H: Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain (From Topology) | T: Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | F: PF16454 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C [auth B] | PF00600 | Influenza non-structural protein (NS1) (Flu_NS1) | Influenza non-structural protein (NS1) | - | Family |
B [auth C], D | PF16454 | Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain (PI3K_P85_iSH2) | Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain | This domain is found between the two SH2 domains in phosphatidylinositol 3-kinase regulatory subunit P85. It forms a complex with the adaptor-binding domain of phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, C [auth B] | IPR038064 | Influenza A virus NS1, effector domain-like superfamily | Homologous Superfamily |
A, C [auth B] | IPR009068 | uS15/NS1, RNA-binding domain superfamily | Homologous Superfamily |
A, C [auth B] | IPR000256 | Influenza A virus NS1 protein | Family |
A, C [auth B] | IPR004208 | Influenza non-structural protein (NS1) | Family |
B [auth C], D | IPR036860 | SH2 domain superfamily | Homologous Superfamily |
B [auth C], D | IPR000980 | SH2 domain | Domain |
B [auth C], D | IPR035586 | Phosphatidylinositol 3-kinase regulatory subunit beta, SH3 domain | Domain |
B [auth C], D | IPR036028 | SH3-like domain superfamily | Homologous Superfamily |
B [auth C], D | IPR008936 | Rho GTPase activation protein | Homologous Superfamily |
B [auth C], D | IPR035020 | PI3K p85 subunit, C-terminal SH2 domain | Domain |
B [auth C], D | IPR000198 | Rho GTPase-activating protein domain | Domain |
B [auth C], D | IPR032498 | PI3K regulatory subunit p85-related , inter-SH2 domain | Domain |
B [auth C], D | IPR001452 | SH3 domain | Domain |
B [auth C], D | IPR035022 | PI3K p85 subunit, N-terminal SH2 domain | Domain |