7R5M | pdb_00007r5m

Core-binding domain of fungal E3-binding domain bound to the pyruvate dehydrogenase E2 core

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D [auth G]	SCOP2B Superfamily	CoA-dependent acyltransferases	8098566	3000272	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	CoA-dependent acyltransferases	8098566	3000272	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	CoA-dependent acyltransferases	8098566	3000272	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H [auth L]	2-oxoacid_dh	e7r5mL1	A: a+b complex topology	X: CoA-dependent acyltransferases (From Topology)	H: CoA-dependent acyltransferases (From Topology)	T: CoA-dependent acyltransferases	F: 2-oxoacid_dh	ECOD (1.6)
G [auth K]	2-oxoacid_dh	e7r5mK1	A: a+b complex topology	X: CoA-dependent acyltransferases (From Topology)	H: CoA-dependent acyltransferases (From Topology)	T: CoA-dependent acyltransferases	F: 2-oxoacid_dh	ECOD (1.6)
E [auth H]	2-oxoacid_dh	e7r5mH1	A: a+b complex topology	X: CoA-dependent acyltransferases (From Topology)	H: CoA-dependent acyltransferases (From Topology)	T: CoA-dependent acyltransferases	F: 2-oxoacid_dh	ECOD (1.6)
D [auth G]	2-oxoacid_dh	e7r5mG1	A: a+b complex topology	X: CoA-dependent acyltransferases (From Topology)	H: CoA-dependent acyltransferases (From Topology)	T: CoA-dependent acyltransferases	F: 2-oxoacid_dh	ECOD (1.6)
B	2-oxoacid_dh	e7r5mB1	A: a+b complex topology	X: CoA-dependent acyltransferases (From Topology)	H: CoA-dependent acyltransferases (From Topology)	T: CoA-dependent acyltransferases	F: 2-oxoacid_dh	ECOD (1.6)
A	2-oxoacid_dh	e7r5mA1	A: a+b complex topology	X: CoA-dependent acyltransferases (From Topology)	H: CoA-dependent acyltransferases (From Topology)	T: CoA-dependent acyltransferases	F: 2-oxoacid_dh	ECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C [auth F], F [auth J], I [auth M]	Pyruvate dehydrogenase X component	structural molecule activity acyltransferase activity transferase activity catalytic activity	aerobic respiration cellular respiration energy derivation by oxidation of organic compounds oxoacid metabolic process acetyl-CoA metabolic process organic acid metabolic process nucleobase-containing compound metabolic process acyl-CoA metabolic process nucleobase-containing small molecule metabolic process purine-containing compound biosynthetic process acyl-CoA biosynthetic process phosphate-containing compound metabolic process sulfur compound metabolic process small molecule metabolic process aerobic respiration cellular respiration energy derivation by oxidation of organic compounds oxoacid metabolic process acetyl-CoA metabolic process organic acid metabolic process nucleobase-containing compound metabolic process acyl-CoA metabolic process nucleobase-containing small molecule metabolic process purine-containing compound biosynthetic process acyl-CoA biosynthetic process phosphate-containing compound metabolic process sulfur compound metabolic process small molecule metabolic process amide metabolic process phosphorus metabolic process nucleoside phosphate metabolic process pyruvate metabolic process carboxylic acid metabolic process pyruvate decarboxylation to acetyl-CoA primary metabolic process amide biosynthetic process generation of precursor metabolites and energy nucleobase-containing compound biosynthetic process purine-containing compound metabolic process acetyl-CoA biosynthetic process sulfur compound biosynthetic process biosynthetic process organophosphate metabolic process organophosphate biosynthetic process nucleoside phosphate biosynthetic process metabolic process cellular process monocarboxylic acid metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex catalytic complex oxidoreductase complex transferase complex pyruvate dehydrogenase complex acetyltransferase complex membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex catalytic complex oxidoreductase complex transferase complex pyruvate dehydrogenase complex acetyltransferase complex alpha-ketoacid dehydrogenase complex
A, B, D [auth G], E [auth H], G [auth K], A, B, D [auth G], E [auth H], G [auth K], H [auth L]	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	acetyltransferase activity catalytic activity, acting on a protein acyltransferase activity dihydrolipoyllysine-residue acetyltransferase activity acyltransferase activity, transferring groups other than amino-acyl groups transferase activity S-acetyltransferase activity S-acyltransferase activity catalytic activity	aerobic respiration cellular respiration energy derivation by oxidation of organic compounds oxoacid metabolic process acetyl-CoA metabolic process organic acid metabolic process nucleobase-containing compound metabolic process acyl-CoA metabolic process nucleobase-containing small molecule metabolic process purine-containing compound biosynthetic process acyl-CoA biosynthetic process phosphate-containing compound metabolic process sulfur compound metabolic process small molecule metabolic process aerobic respiration cellular respiration energy derivation by oxidation of organic compounds oxoacid metabolic process acetyl-CoA metabolic process organic acid metabolic process nucleobase-containing compound metabolic process acyl-CoA metabolic process nucleobase-containing small molecule metabolic process purine-containing compound biosynthetic process acyl-CoA biosynthetic process phosphate-containing compound metabolic process sulfur compound metabolic process small molecule metabolic process amide metabolic process phosphorus metabolic process nucleoside phosphate metabolic process pyruvate metabolic process carboxylic acid metabolic process pyruvate decarboxylation to acetyl-CoA primary metabolic process amide biosynthetic process generation of precursor metabolites and energy nucleobase-containing compound biosynthetic process purine-containing compound metabolic process acetyl-CoA biosynthetic process sulfur compound biosynthetic process biosynthetic process organophosphate metabolic process organophosphate biosynthetic process nucleoside phosphate biosynthetic process metabolic process cellular process monocarboxylic acid metabolic process	protein-containing complex catalytic complex oxidoreductase complex transferase complex pyruvate dehydrogenase complex acetyltransferase complex alpha-ketoacid dehydrogenase complex membrane-bounded organelle intracellular anatomical structure mitochondrion membrane-enclosed lumen intracellular membrane-bounded organelle mitochondrial matrix intracellular organelle lumen protein-containing complex catalytic complex oxidoreductase complex transferase complex pyruvate dehydrogenase complex acetyltransferase complex alpha-ketoacid dehydrogenase complex membrane-bounded organelle intracellular anatomical structure mitochondrion membrane-enclosed lumen intracellular membrane-bounded organelle mitochondrial matrix intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C [auth F], F [auth J], I [auth M]	IPR036625	E3-binding domain superfamily	Homologous Superfamily
C [auth F], F [auth J], I [auth M]	IPR004167	Peripheral subunit-binding domain	Domain
C [auth F], F [auth J], I [auth M]	IPR011053	Single hybrid motif	Homologous Superfamily
C [auth F], F [auth J], I [auth M]	IPR045257	Dihydrolipoamide acetyltransferase/Pyruvate dehydrogenase protein X component	Family
C [auth F], F [auth J], I [auth M]	IPR003016	2-oxo acid dehydrogenase, lipoyl-binding site	Binding Site
C [auth F], F [auth J], I [auth M]	IPR000089	Biotin/lipoyl attachment	Domain
A, B, D [auth G], E [auth H], G [auth K], A, B, D [auth G], E [auth H], G [auth K], H [auth L]	IPR001078	2-oxoacid dehydrogenase acyltransferase, catalytic domain	Domain
A, B, D [auth G], E [auth H], G [auth K], A, B, D [auth G], E [auth H], G [auth K], H [auth L]	IPR045257	Dihydrolipoamide acetyltransferase/Pyruvate dehydrogenase protein X component	Family
A, B, D [auth G], E [auth H], G [auth K], A, B, D [auth G], E [auth H], G [auth K], H [auth L]	IPR006257	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex	Family
A, B, D [auth G], E [auth H], G [auth K], A, B, D [auth G], E [auth H], G [auth K], H [auth L]	IPR023213	Chloramphenicol acetyltransferase-like domain superfamily	Homologous Superfamily
A, B, D [auth G], E [auth H], G [auth K], A, B, D [auth G], E [auth H], G [auth K], H [auth L]	IPR036625	E3-binding domain superfamily	Homologous Superfamily
A, B, D [auth G], E [auth H], G [auth K], A, B, D [auth G], E [auth H], G [auth K], H [auth L]	IPR004167	Peripheral subunit-binding domain	Domain
A, B, D [auth G], E [auth H], G [auth K], A, B, D [auth G], E [auth H], G [auth K], H [auth L]	IPR011053	Single hybrid motif	Homologous Superfamily
A, B, D [auth G], E [auth H], G [auth K], A, B, D [auth G], E [auth H], G [auth K], H [auth L]	IPR003016	2-oxo acid dehydrogenase, lipoyl-binding site	Binding Site
A, B, D [auth G], E [auth H], G [auth K], A, B, D [auth G], E [auth H], G [auth K], H [auth L]	IPR000089	Biotin/lipoyl attachment	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.