Human nuclear pore complex (dilated)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| V [auth A6] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090313 | 3002255 | SCOP2B (2022-06-29) |
| U [auth A5] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090313 | 3002255 | SCOP2B (2022-06-29) |
| T [auth A4] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090313 | 3002255 | SCOP2B (2022-06-29) |
| S [auth A3] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090313 | 3002255 | SCOP2B (2022-06-29) |
| R [auth A2] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090313 | 3002255 | SCOP2B (2022-06-29) |
| Q [auth A1] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090313 | 3002255 | SCOP2B (2022-06-29) |
| P [auth A0] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090313 | 3002255 | SCOP2B (2022-06-29) |
| X [auth B1] | SCOP2B Superfamily | Scaffolding nucleoporins | 8053964 | 3002255 | SCOP2B (2022-06-29) |
| W [auth B0] | SCOP2B Superfamily | Scaffolding nucleoporins | 8053964 | 3002255 | SCOP2B (2022-06-29) |
| IA [auth D5] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090958 | 3002255 | SCOP2B (2022-06-29) |
| IA [auth D5] | SCOP2B Superfamily | Nucleoporin beta-propeller domain | 8090969 | 3000456 | SCOP2B (2022-06-29) |
| HA [auth D4] | SCOP2B Superfamily | Nucleoporin beta-propeller domain | 8090969 | 3000456 | SCOP2B (2022-06-29) |
| HA [auth D4] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090958 | 3002255 | SCOP2B (2022-06-29) |
| GA [auth D3] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090958 | 3002255 | SCOP2B (2022-06-29) |
| GA [auth D3] | SCOP2B Superfamily | Nucleoporin beta-propeller domain | 8090969 | 3000456 | SCOP2B (2022-06-29) |
| FA [auth D2] | SCOP2B Superfamily | Nucleoporin beta-propeller domain | 8090969 | 3000456 | SCOP2B (2022-06-29) |
| FA [auth D2] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090958 | 3002255 | SCOP2B (2022-06-29) |
| EA [auth D1] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090958 | 3002255 | SCOP2B (2022-06-29) |
| EA [auth D1] | SCOP2B Superfamily | Nucleoporin beta-propeller domain | 8090969 | 3000456 | SCOP2B (2022-06-29) |
| DA [auth D0] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090958 | 3002255 | SCOP2B (2022-06-29) |
| DA [auth D0] | SCOP2B Superfamily | Nucleoporin beta-propeller domain | 8090969 | 3000456 | SCOP2B (2022-06-29) |
| OA [auth F3] | SCOP2B Superfamily | RNA-binding domain, RBD | 8087390 | 3000110 | SCOP2B (2022-06-29) |
| NA [auth F2] | SCOP2B Superfamily | RNA-binding domain, RBD | 8087390 | 3000110 | SCOP2B (2022-06-29) |
| MA [auth F1] | SCOP2B Superfamily | RNA-binding domain, RBD | 8087390 | 3000110 | SCOP2B (2022-06-29) |
| LA [auth F0] | SCOP2B Superfamily | RNA-binding domain, RBD | 8087390 | 3000110 | SCOP2B (2022-06-29) |
| WA [auth I3] | SCOP2B Superfamily | Nup58-like | 8053256 | 3002169 | SCOP2B (2022-06-29) |
| VA [auth I2] | SCOP2B Superfamily | Nup58-like | 8053256 | 3002169 | SCOP2B (2022-06-29) |
| UA [auth I1] | SCOP2B Superfamily | Nup58-like | 8053256 | 3002169 | SCOP2B (2022-06-29) |
| TA [auth I0] | SCOP2B Superfamily | Nup58-like | 8053256 | 3002169 | SCOP2B (2022-06-29) |
| ZA [auth J2] | SCOP2B Superfamily | Nup62-like | 8053268 | 3002170 | SCOP2B (2022-06-29) |
| YA [auth J1] | SCOP2B Superfamily | Nup62-like | 8053268 | 3002170 | SCOP2B (2022-06-29) |
| XA [auth J0] | SCOP2B Superfamily | Nup62-like | 8053268 | 3002170 | SCOP2B (2022-06-29) |
| BB [auth J4] | SCOP2B Superfamily | Nup62-like | 8053268 | 3002170 | SCOP2B (2022-06-29) |
| AB [auth J3] | SCOP2B Superfamily | Nup62-like | 8053268 | 3002170 | SCOP2B (2022-06-29) |
| FB [auth K3] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090957 | 3002255 | SCOP2B (2022-06-29) |
| FB [auth K3] | SCOP2B Superfamily | Nucleoporin beta-propeller domain | 8043971 | 3000456 | SCOP2B (2022-06-29) |
| EB [auth K2] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090957 | 3002255 | SCOP2B (2022-06-29) |
| EB [auth K2] | SCOP2B Superfamily | Nucleoporin beta-propeller domain | 8043971 | 3000456 | SCOP2B (2022-06-29) |
| DB [auth K1] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090957 | 3002255 | SCOP2B (2022-06-29) |
| DB [auth K1] | SCOP2B Superfamily | Nucleoporin beta-propeller domain | 8043971 | 3000456 | SCOP2B (2022-06-29) |
| CB [auth K0] | SCOP2B Superfamily | Nucleoporin beta-propeller domain | 8043971 | 3000456 | SCOP2B (2022-06-29) |
| CB [auth K0] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090957 | 3002255 | SCOP2B (2022-06-29) |
| NB [auth M3] | SCOP2B Superfamily | Coat and nuclear envelope proteins | 8054128 | 3002276 | SCOP2B (2022-06-29) |
| MB [auth M2] | SCOP2B Superfamily | Coat and nuclear envelope proteins | 8054128 | 3002276 | SCOP2B (2022-06-29) |
| LB [auth M1] | SCOP2B Superfamily | Coat and nuclear envelope proteins | 8054128 | 3002276 | SCOP2B (2022-06-29) |
| KB [auth M0] | SCOP2B Superfamily | Coat and nuclear envelope proteins | 8054128 | 3002276 | SCOP2B (2022-06-29) |
| ZB [auth P3] | SCOP2B Superfamily | Coat and nuclear envelope proteins | 8054125 | 3002276 | SCOP2B (2022-06-29) |
| YB [auth P2] | SCOP2B Superfamily | Coat and nuclear envelope proteins | 8054125 | 3002276 | SCOP2B (2022-06-29) |
| XB [auth P1] | SCOP2B Superfamily | Coat and nuclear envelope proteins | 8054125 | 3002276 | SCOP2B (2022-06-29) |
| WB [auth P0] | SCOP2B Superfamily | Coat and nuclear envelope proteins | 8054125 | 3002276 | SCOP2B (2022-06-29) |
| HC [auth R3] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090984 | 3002255 | SCOP2B (2022-06-29) |
| HC [auth R3] | SCOP2B Superfamily | Nucleoporin beta-propeller domain | 8090976 | 3000456 | SCOP2B (2022-06-29) |
| GC [auth R2] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090984 | 3002255 | SCOP2B (2022-06-29) |
| GC [auth R2] | SCOP2B Superfamily | Nucleoporin beta-propeller domain | 8090976 | 3000456 | SCOP2B (2022-06-29) |
| FC [auth R1] | SCOP2B Superfamily | Nucleoporin beta-propeller domain | 8090976 | 3000456 | SCOP2B (2022-06-29) |
| FC [auth R1] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090984 | 3002255 | SCOP2B (2022-06-29) |
| EC [auth R0] | SCOP2B Superfamily | Nucleoporin beta-propeller domain | 8090976 | 3000456 | SCOP2B (2022-06-29) |
| EC [auth R0] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090984 | 3002255 | SCOP2B (2022-06-29) |
| OC [auth U0] | SCOP2B Superfamily | ZU5 domain-like | 8091407 | 3002026 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| O [auth 41] | e7r5j411 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295) | |
| N [auth 40] | e7r5j401 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295) | |
| V [auth A6] | AAA_lid_RFC1 | e7r5jA61 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| U [auth A5] | AAA_lid_RFC1 | e7r5jA51 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| T [auth A4] | AAA_lid_RFC1 | e7r5jA41 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| S [auth A3] | AAA_lid_RFC1 | e7r5jA31 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| R [auth A2] | AAA_lid_RFC1 | e7r5jA21 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| Q [auth A1] | AAA_lid_RFC1 | e7r5jA11 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| P [auth A0] | AAA_lid_RFC1 | e7r5jA01 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| X [auth B1] | AAA_lid_RFC1 | e7r5jB11 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| W [auth B0] | AAA_lid_RFC1 | e7r5jB01 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| Z [auth C1] | AAA_lid_RFC1 | e7r5jC11 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| Y [auth C0] | AAA_lid_RFC1 | e7r5jC01 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| CA [auth C4] | AAA_lid_RFC1 | e7r5jC41 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| BA [auth C3] | AAA_lid_RFC1 | e7r5jC31 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| AA [auth C2] | AAA_lid_RFC1 | e7r5jC21 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| IA [auth D5] | e7r5jD51 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295) | |
| HA [auth D4] | e7r5jD41 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295) | |
| GA [auth D3] | e7r5jD31 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295) | |
| FA [auth D2] | e7r5jD21 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295) | |
| EA [auth D1] | e7r5jD11 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295) | |
| DA [auth D0] | e7r5jD01 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295) | |
| SA [auth H3] | AAA_lid_RFC1 | e7r5jH31 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| RA [auth H2] | AAA_lid_RFC1 | e7r5jH21 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| QA [auth H1] | AAA_lid_RFC1 | e7r5jH11 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| PA [auth H0] | AAA_lid_RFC1 | e7r5jH01 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| WA [auth I3] | AAA_lid_RFC1 | e7r5jI31 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| VA [auth I2] | AAA_lid_RFC1 | e7r5jI21 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| UA [auth I1] | AAA_lid_RFC1 | e7r5jI11 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| TA [auth I0] | AAA_lid_RFC1 | e7r5jI01 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| FB [auth K3] | e7r5jK31 | A: alpha arrays | X: cradle loop barrel | H: Cytochrome P450 | T: Cytochrome P450 | F: | ECOD (v295) | |
| EB [auth K2] | e7r5jK21 | A: alpha arrays | X: cradle loop barrel | H: Cytochrome P450 | T: Cytochrome P450 | F: | ECOD (v295) | |
| DB [auth K1] | e7r5jK11 | A: alpha arrays | X: cradle loop barrel | H: Cytochrome P450 | T: Cytochrome P450 | F: | ECOD (v295) | |
| CB [auth K0] | e7r5jK01 | A: alpha arrays | X: cradle loop barrel | H: Cytochrome P450 | T: Cytochrome P450 | F: | ECOD (v295) | |
| JB [auth L3] | AAA_lid_RFC1 | e7r5jL31 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| IB [auth L2] | AAA_lid_RFC1 | e7r5jL21 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| HB [auth L1] | AAA_lid_RFC1 | e7r5jL11 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| GB [auth L0] | AAA_lid_RFC1 | e7r5jL01 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| NB [auth M3] | AAA_lid_RFC1 | e7r5jM31 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| MB [auth M2] | AAA_lid_RFC1 | e7r5jM21 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| LB [auth M1] | AAA_lid_RFC1 | e7r5jM11 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| KB [auth M0] | AAA_lid_RFC1 | e7r5jM01 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| VB [auth O3] | e7r5jO31 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295) | |
| UB [auth O2] | e7r5jO21 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295) | |
| TB [auth O1] | e7r5jO11 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295) | |
| SB [auth O0] | e7r5jO01 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295) | |
| ZB [auth P3] | e7r5jP31 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295) | |
| YB [auth P2] | e7r5jP21 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295) | |
| XB [auth P1] | e7r5jP11 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295) | |
| WB [auth P0] | e7r5jP01 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295) | |
| DC [auth Q3] | e7r5jQ31 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295) | |
| CC [auth Q2] | e7r5jQ21 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295) | |
| BC [auth Q1] | e7r5jQ11 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295) | |
| AC [auth Q0] | e7r5jQ01 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295) | |
| HC [auth R3] | AAA_lid_RFC1 | e7r5jR32 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| GC [auth R2] | AAA_lid_RFC1 | e7r5jR22 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| FC [auth R1] | AAA_lid_RFC1 | e7r5jR12 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| EC [auth R0] | AAA_lid_RFC1 | e7r5jR02 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| LC [auth S3] | e7r5jS31 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295) | |
| KC [auth S2] | e7r5jS21 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295) | |
| JC [auth S1] | e7r5jS11 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295) | |
| IC [auth S0] | e7r5jS01 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295) | |
| UC [auth U6] | AAA_lid_RFC1 | e7r5jU61 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| TC [auth U5] | AAA_lid_RFC1 | e7r5jU51 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| SC [auth U4] | AAA_lid_RFC1 | e7r5jU41 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| RC [auth U3] | AAA_lid_RFC1 | e7r5jU31 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| QC [auth U2] | AAA_lid_RFC1 | e7r5jU21 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| PC [auth U1] | AAA_lid_RFC1 | e7r5jU11 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_RFC1 | ECOD (v295) |
| OC [auth U0] | e7r5jU01 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295) | |
| RB [auth N3] | e7r5jN31 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295) | |
| QB [auth N2] | e7r5jN21 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295) | |
| PB [auth N1] | e7r5jN11 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295) | |
| OB [auth N0] | e7r5jN01 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF22962 | NUP210 Ig-like domain 7 (Ig_NUP210_7th) | NUP210 Ig-like domain 7 | This domain is found in the homologues of Nuclear pore membrane glycoprotein 210 (NUP210). NUP210 is essential for nuclear pore assembly and fusion, nuclear pore spacing, as well as for its structural integrity. NUP210 is composed of multiple immunog ... | Domain | |
| PF25354 | NUP210-like, Ig-like domain 16 (Ig_NUP210_16th) | NUP210-like, Ig-like domain 16 | This domain is found in human Nuclear pore membrane glycoprotein 210 (NUP210), which is essential for nuclear pore assembly and fusion, nuclear pore spacing, as well as structural integrity. NUP210 is composed of multiple immunoglobin-like (Ig-like) ... | Domain | |
| PF24991 | NUP210 forth Ig-like domain (Ig_NUP210_4th) | NUP210 forth Ig-like domain | This is the forth Ig-like domain of NUP210 and its homologues. NUP210 is essential for nuclear pore assembly and fusion, nuclear pore spacing, as well as for its structural integrity. NUP210 is composed of multiple immunoglobulin-like (Ig-like) domai ... | Domain | |
| PF26184 | NUP210 Ig-like domain 8 (Ig_NUP210_8th) | NUP210 Ig-like domain 8 | This entry represents the eighth Ig-like domain in NUP210 proteins. NUP210 proteins are membrane glycoproteins that are integral components of the nuclear pore complex. These proteins are essential for the assembly and fusion of nuclear pores, mainta ... | Domain | |
| PF26183 | NUP210 Ig-like domain 14 (Ig_NUP210_14th) | NUP210 Ig-like domain 14 | This entry represents the 14th Ig-like domain in NUP210 proteins. NUP210 proteins are membrane glycoproteins that are integral components of the nuclear pore complex. These proteins are essential for the assembly and fusion of nuclear pores, maintain ... | Domain | |
| PF26182 | NUP210 Ig-like domain 5 (Ig_NUP210_5th) | NUP210 Ig-like domain 5 | This entry represents the fifth Ig-like domain in NUP210 proteins. NUP210 proteins are membrane glycoproteins that are integral components of the nuclear pore complex. These proteins are essential for the assembly and fusion of nuclear pores, maintai ... | Domain | |
| PF26181 | NUP210 Ig-like domain 13 (Ig_NUP210_13th) | NUP210 Ig-like domain 13 | This entry represents the 13th Ig-like domain in NUP210 proteins. NUP210 proteins are membrane glycoproteins that are integral components of the nuclear pore complex. These proteins are essential for the assembly and fusion of nuclear pores, maintain ... | Domain | |
| PF22957 | NUP210 Ig-like domain (NUP210_Ig) | NUP210 Ig-like domain | This domain is found in the homologues of Nuclear pore membrane glycoprotein 210 (NUP210). NUP210 is essential for nuclear pore assembly and fusion, nuclear pore spacing, as well as for its structural integrity. NUP210 is composed of multiple immunog ... | Domain | |
| PF22967 | NUP210 Ig-like domain 1 (Ig_NUP210_1st) | NUP210 Ig-like domain 1 | This domain is found in the homologues of human Nuclear pore membrane glycoprotein 210 (NUP210). NUP210 is essential for nuclear pore assembly and fusion, nuclear pore spacing, as well as for its structural integrity. NUP210 is composed of multiple i ... | Domain | |
| PF22959 | NUP210 Ig-like domain 15 (Ig_NUP210_15th) | NUP210 Ig-like domain 15 | This domain is found in the homologues of Nuclear pore membrane glycoprotein 210 (NUP210). NUP210 is essential for nuclear pore assembly and fusion, nuclear pore spacing, as well as for its structural integrity. NUP210 is composed of multiple immunog ... | Domain | |
| PF22969 | NUP210 Ig-like domain 2 (Ig_NUP210_2nd) | NUP210 Ig-like domain 2 | This domain is found in the homologues of human Nuclear pore membrane glycoprotein 210 (NUP210). NUP210 is essential for nuclear pore assembly and fusion, nuclear pore spacing, as well as for its structural integrity. NUP210 is composed of multiple i ... | Domain | |
| PF02368 | Bacterial Ig-like domain (group 2) (Big_2) | Bacterial Ig-like domain (group 2) | This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins. | Domain | |
| PF22963 | NUP210 Ig-like domain 3 (Ig_NUP210_3rd) | NUP210 Ig-like domain 3 | This domain is found in the homologues of human Nuclear pore membrane glycoprotein 210 (NUP210). NUP210 is essential for nuclear pore assembly and fusion, nuclear pore spacing, as well as for its structural integrity. NUP210 is composed of multiple i ... | Domain | |
| PF24902 | NUP210, Ig-like domain 9 (Ig_NUP210_9th) | NUP210, Ig-like domain 9 | This domain is found in human Nuclear pore membrane glycoprotein 210 (NUP210), which is essential for nuclear pore assembly and fusion, nuclear pore spacing, as well as structural integrity. NUP210 is composed of multiple immunoglobin-like (Ig-like) ... | Domain | |
| PF24935 | NUP210-like, Ig-like domain 6 (Ig_NUP210_6th) | NUP210-like, Ig-like domain 6 | This domain is found in human Nuclear pore membrane glycoprotein 210 (NUP210), which is essential for nuclear pore assembly and fusion, nuclear pore spacing, as well as structural integrity. NUP210 is composed of multiple immunoglobin-like (Ig-like) ... | Domain | |
| N [auth 40], O [auth 41] | PF25460 | Aladin seven-bladed propeller (Beta-prop_Aladin) | Aladin seven-bladed propeller | - | Repeat |
| PF04097 | Nup93/Nic96 (Nic96) | Nup93/Nic96 | - | Repeat | |
| W [auth B0], X [auth B1] | PF10487 | Nucleoporin Nup188, N-terminal (Nup188_N) | Nucleoporin Nup188, N-terminal | - | Repeat |
| W [auth B0], X [auth B1] | PF21093 | Nucleoporin Nup188, N-terminal subdomain III (Nup188_N-subdom_III) | Nucleoporin Nup188, N-terminal subdomain III | - | Repeat |
| W [auth B0], X [auth B1] | PF21094 | Nup188 SH3-like domain (Nup188_SH3-like) | Nup188 SH3-like domain | Nup188 is one of the many peptides that make up the nucleoporin complex (NPC), and is found across eukaryotes [1,2]. The Nup188 subcomplex (Nic96p-Nup188p-Nup192p-Pom152p) is one of at least six that make up the NPC, and as such is symmetrically loca ... | Domain |
| AA [auth C2], BA [auth C3], CA [auth C4], Y [auth C0], Z [auth C1] | PF11894 | Nuclear pore complex scaffold, nucleoporins 186/192/205 (Nup192) | Nuclear pore complex scaffold, nucleoporins 186/192/205 | - | Repeat |
| PF03177 | Non-repetitive/WGA-negative nucleoporin C-terminal (Nucleoporin_C) | Non-repetitive/WGA-negative nucleoporin C-terminal | - | Repeat | |
| PF08801 | Nup133 N terminal like (Nucleoporin_N) | Nup133 N terminal like | - | Repeat | |
| JA [auth E0], KA [auth E1] | PF09531 | Nucleoporin protein Ndc1-Nup (Ndc1_Nup) | Nucleoporin protein Ndc1-Nup | - | Family |
| LA [auth F0], MA [auth F1], NA [auth F2], OA [auth F3] | PF05172 | Nup53/35/40-type RNA recognition motif (RRM_Nup35) | Nup53/35/40-type RNA recognition motif | Members of this family belong to the nucleor pore complex, NPC, the only gateway between the nucleus and the cytoplasm. The NPC consists of several subcomplexes each one of which is made up of multiple copies of several individual Nup, Nic or Sec pro ... | Domain |
| PA [auth H0], QA [auth H1], RA [auth H2], SA [auth H3] | PF18437 | Nup54 C-terminal interacting domain (Nup54_C) | Nup54 C-terminal interacting domain | The mammalian nuclear pore complex (NPC) conducts nucleocytoplasmic transport and contains multiple copies of nucleoporins (nups). This is the C-terminal interacting domain found on Nup54. Nup45 is a splice variant of Nup58 with an identical alpha-he ... | Domain |
| PA [auth H0], QA [auth H1], RA [auth H2], SA [auth H3] | PF13874 | Nucleoporin complex subunit 54 (Nup54) | Nucleoporin complex subunit 54 | - | Coiled-coil |
| CB [auth K0], DB [auth K1], EB [auth K2], FB [auth K3] | PF03177 | Non-repetitive/WGA-negative nucleoporin C-terminal (Nucleoporin_C) | Non-repetitive/WGA-negative nucleoporin C-terminal | - | Repeat |
| GB [auth L0], HB [auth L1], IB [auth L2], JB [auth L3] | PF04121 | Nuclear pore protein 84 / 107 (Nup84_Nup100) | Nuclear pore protein 84 / 107 | - | Repeat |
| KB [auth M0], LB [auth M1], MB [auth M2], NB [auth M3] | PF12110 | Nuclear protein 96 (Nup96) | Nuclear protein 96 | Nup96 (often known by the name of its yeast homolog Nup145C) is part of the Nup84 heptameric complex in the nuclear pore complex. Nup96 complexes with Sec13 in the middle of the heptamer. The function of the heptamer is to coat the curvature of the n ... | Domain |
| SB [auth O0], TB [auth O1], UB [auth O2], VB [auth O3] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
| WB [auth P0], XB [auth P1], YB [auth P2], ZB [auth P3] | PF07575 | Nup85 Nucleoporin (Nucleopor_Nup85) | Nup85 Nucleoporin | - | Repeat |
| AC [auth Q0], BC [auth Q1], CC [auth Q2], DC [auth Q3] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
| EC [auth R0], FC [auth R1], GC [auth R2], HC [auth R3] | PF23347 | Nup160 C-terminal TPR (TPR_Nup160_C) | Nup160 C-terminal TPR | - | Repeat |
| EC [auth R0], FC [auth R1], GC [auth R2], HC [auth R3] | PF23345 | Nucleoporin NUP160, helical domain (NUP160_helical) | Nucleoporin NUP160, helical domain | This entry represents the central helical domain of NUP160, which is found in animals, including humans, mice, and Drosophila melanogaster. NUP160 is one of up to 60 proteins that constitute the Nuclear Pore Complex (NPC) as a component of the NUP107 ... | Domain |
| EC [auth R0], FC [auth R1], GC [auth R2], HC [auth R3] | PF23354 | NUP160/120 middle TPR (TPR_NUP160_120_M) | NUP160/120 middle TPR | - | Repeat |
| EC [auth R0], FC [auth R1], GC [auth R2], HC [auth R3] | PF11715 | Nucleoporin Nup120/160, beta-propeller domain (Beta-prop_Nup120_160) | Nucleoporin Nup120/160, beta-propeller domain | - | Repeat |
| IC [auth S0], JC [auth S1], KC [auth S2], LC [auth S3] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
| MC [auth T0], NC [auth T1] | PF13934 | Nuclear pore complex assembly (ELYS) | Nuclear pore complex assembly | - | Repeat |
| PF04096 | Nup98-96 autopeptidase S59 (Nucleoporin2) | Nup98-96 autopeptidase S59 | The nuclear pore complex protein plays a role in bidirectional transport across the nucleoporin complex in nucleocytoplasmic transport. The mammalian nuclear pore complex (NPC) is comprised of approximately 30 unique proteins, collectively known as n ... | Domain | |
| WC [auth W0] | PF10168 | Nuclear pore component (Nup88) | Nuclear pore component | - | Repeat |
| OB [auth N0], PB [auth N1], QB [auth N2], RB [auth N3] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |














