Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth B]SCOP2B SuperfamilyRibosomal S3Ae-like8053212 3002166 SCOP2B (2022-06-29)
H [auth I]SCOP2B Superfamily50S Ribosomal protein L14-like8053077 3000433 SCOP2B (2022-06-29)
I [auth K]SCOP2B SuperfamilyWinged helix DNA-binding domain8055714 3000034 SCOP2B (2022-06-29)
S [auth a]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8053143 3000068 SCOP2B (2022-06-29)
Y [auth M]SCOP2B SuperfamilyL30e-like8063978 3001739 SCOP2B (2022-06-29)
BA [auth W]SCOP2B SuperfamilyRibosomal protein S88095469 3000709 SCOP2B (2022-06-29)
J [auth L]SCOP2B SuperfamilyNucleic acid-binding proteins8052717 3000135 SCOP2B (2022-06-29)
J [auth L]SCOP2B SuperfamilyRibosomal S17 N-terminal domain-like8052715 3002138 SCOP2B (2022-06-29)
L [auth Q]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8082685 3000100 SCOP2B (2022-06-29)
N [auth S]SCOP2B SuperfamilyS13-like H2TH domain8101555 3000053 SCOP2B (2022-06-29)
O [auth T]SCOP2B SuperfamilyWinged helix DNA-binding domain8089318 3000034 SCOP2B (2022-06-29)
P [auth U]SCOP2B SuperfamilyRibosomal protein S108098806 3001336 SCOP2B (2022-06-29)
Q [auth V]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8053139 3000068 SCOP2B (2022-06-29)
T [auth c]SCOP2B SuperfamilyNucleic acid-binding proteins8063426 3000135 SCOP2B (2022-06-29)
U [auth d]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052572 3000068 SCOP2B (2022-06-29)
W [auth G]SCOP2B SuperfamilyGS N-terminal domain-like8053171 3000408 SCOP2B (2022-06-29)
Z [auth N]SCOP2B SuperfamilyHomeodomain-like8052958 3000001 SCOP2B (2022-06-29)
Z [auth N]SCOP2B SuperfamilyS15/NS1 RNA-binding domain8052959 3001284 SCOP2B (2022-06-29)
AA [auth O]SCOP2B SuperfamilyTranslational machinery components8098844 3000571 SCOP2B (2022-06-29)
DA [auth Z]SCOP2B SuperfamilyWinged helix DNA-binding domain8090992 3000034 SCOP2B (2022-06-29)
FA [auth e]SCOP2B SuperfamilyRibosomal protein S30e-like8053453 3002190 SCOP2B (2022-06-29)
IA [auth A]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8052791 3001397 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II)8043545 3001043 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyNucleic acid-binding proteins8052756 3000135 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyAlpha-L RNA-binding motif8052755 3001473 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8052757 3000334 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyRibosomal protein S78066003 3000799 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth B]PF01015e7r4xB2 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: PF01015ECOD (1.6)
C [auth B]PF01015e7r4xB1 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: PF01015ECOD (1.6)
H [auth I]PF01201e7r4xI1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF01201ECOD (1.6)
I [auth K]PF03501e7r4xK1 A: alpha arraysX: HTHH: HTHT: wingedF: PF03501ECOD (1.6)
K [auth P]PF00203e7r4xP1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: PF00203ECOD (1.6)
S [auth a]PF01283e7r4xa1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01283ECOD (1.6)
X [auth J]PF00163,PF01479e7r4xJ1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00163,PF01479ECOD (1.6)
Y [auth M]PF01248e7r4xM1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
BA [auth W]PF00410e7r4xW1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: PF00410ECOD (1.6)
BA [auth W]PF00410e7r4xW2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: PF00410ECOD (1.6)
EA [auth b]PF01667e7r4xb1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01667ECOD (1.6)
HA [auth g]PF00400e7r4xg1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF00400ECOD (1.6)
J [auth L]PF00366,PF16205e7r4xL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366,PF16205ECOD (1.6)
L [auth Q]PF00380e7r4xQ1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
M [auth R]PF00833e7r4xR1 A: alpha arraysX: HTHH: HTHT: FF domainF: PF00833ECOD (1.6)
N [auth S]PF00416e7r4xS1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: PF00416ECOD (1.6)
O [auth T]PF01090e7r4xT1 A: alpha arraysX: HTHH: HTHT: wingedF: PF01090ECOD (1.6)
P [auth U]PF00338e7r4xU1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
Q [auth V]PF01249e7r4xV1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: PF01249ECOD (1.6)
R [auth X]PF00164e7r4xX1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
T [auth c]PF01200e7r4xc1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF01200ECOD (1.6)
U [auth d]PF00253e7r4xd1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
V [auth C]PF03719e7r4xC2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
V [auth C]PF00333e7r4xC1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
V [auth C]PF00333e7r4xC3 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: PF00333ECOD (1.6)
W [auth G]PF01092e7r4xG1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: PF01092ECOD (1.6)
Z [auth N]PF08069e7r4xN1 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: PF08069ECOD (1.6)
Z [auth N]PF00312e7r4xN2 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
AA [auth O]PF00411e7r4xO1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
CA [auth Y]PF01282e7r4xY1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF01282ECOD (1.6)
DA [auth Z]PF03297e7r4xZ1 A: alpha arraysX: HTHH: HTHT: wingedF: PF03297ECOD (1.6)
FA [auth e]PF04758e7r4xe1 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: PF04758ECOD (1.6)
GA [auth f]PF01599e7r4xf1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01599ECOD (1.6)
IA [auth A]PF00318e7r4xA1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
DPF00189e7r4xD1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: PF00189ECOD (1.6)
DPF07650e7r4xD2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF07650ECOD (1.6)
EPF00900e7r4xE2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00900ECOD (1.6)
EPF00467,PF16121e7r4xE1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF16121ECOD (1.6)
EPF00900,PF01479,PF08071e7r4xE3 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00900,PF01479,PF08071ECOD (1.6)
FPF00177e7r4xF1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
G [auth H]PF01251e7r4xH1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: PF01251ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth B]PF01015Ribosomal S3Ae family (Ribosomal_S3Ae)Ribosomal S3Ae family- Family
H [auth I]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
I [auth K]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.Domain
K [auth P]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
S [auth a]PF01283Ribosomal protein S26e (Ribosomal_S26e)Ribosomal protein S26e- Family
X [auth J]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
X [auth J]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
Y [auth M]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
BA [auth W]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
EA [auth b]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
HA [auth g]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
A [auth n]PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
J [auth L]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
J [auth L]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
L [auth Q]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
M [auth R]PF00833Ribosomal S17 (Ribosomal_S17e)Ribosomal S17- Family
N [auth S]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
O [auth T]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
P [auth U]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
Q [auth V]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
R [auth X]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
T [auth c]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28e- Family
U [auth d]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
V [auth C]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
V [auth C]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
W [auth G]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
Z [auth N]PF08069Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)Ribosomal S13/S15 N-terminal domainThis domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1].Domain
Z [auth N]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
AA [auth O]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
CA [auth Y]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
DA [auth Z]PF03297S25 ribosomal protein (Ribosomal_S25)S25 ribosomal protein- Family
FA [auth e]PF04758Ribosomal protein S30 (Ribosomal_S30)Ribosomal protein S30- Family
GA [auth f]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
IA [auth A]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
IA [auth A]PF1612240S ribosomal protein SA C-terminus (40S_SA_C)40S ribosomal protein SA C-terminus- Family
PF07650KH domain (KH_2)KH domain- Domain
PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].Domain
PF00467KOW motif (KOW)KOW motif- Family
PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
G [auth H]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth B]40S ribosomal protein S3a
H [auth I]40S ribosomal protein S8
I [auth K]40S ribosomal protein S10
K [auth P]40S ribosomal protein S15
S [auth a]40S ribosomal protein S26
X [auth J]40S ribosomal protein S9
Y [auth M]40S ribosomal protein S12
BA [auth W]40S ribosomal protein S15a
EA [auth b]40S ribosomal protein S27
HA [auth g]Receptor of activated protein C kinase 1
A [auth n]60S ribosomal protein L41
J [auth L]40S ribosomal protein S11
L [auth Q]40S ribosomal protein S16
M [auth R]40S ribosomal protein S17
N [auth S]40S ribosomal protein S18
O [auth T]40S ribosomal protein S19
P [auth U]40S ribosomal protein S20
Q [auth V]40S ribosomal protein S21
R [auth X]40S ribosomal protein S23
B [auth 2]18S ribosomal RNA---
T [auth c]40S ribosomal protein S28
U [auth d]40S ribosomal protein S29
V [auth C]40S ribosomal protein S2
W [auth G]40S ribosomal protein S6
Z [auth N]40S ribosomal protein S13
AA [auth O]40S ribosomal protein S14
CA [auth Y]40S ribosomal protein S24
DA [auth Z]40S ribosomal protein S25
FA [auth e]40S ribosomal protein S30
GA [auth f]Ubiquitin-40S ribosomal protein S27a
IA [auth A]40S ribosomal protein SA
40S ribosomal protein S3
40S ribosomal protein S4, X isoform
40S ribosomal protein S5
G [auth H]40S ribosomal protein S7

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth B]IPR001593Small ribosomal subunit protein eS1Family
C [auth B]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
C [auth B]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
H [auth I]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotesHomologous Superfamily
H [auth I]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
H [auth I]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
H [auth I]IPR001047Small ribosomal subunit protein eS8Family
I [auth K]IPR037447Small ribosomal subunit protein eS10Family
I [auth K]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
I [auth K]IPR005326Plectin/eS10, N-terminalDomain
K [auth P]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
K [auth P]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
K [auth P]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
K [auth P]IPR002222Small ribosomal subunit protein uS19Family
S [auth a]IPR047864Ribosomal protein eS26, conserved siteConserved Site
S [auth a]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
S [auth a]IPR000892Small ribosomal subunit protein eS26Family
X [auth J]IPR002942RNA-binding S4 domainDomain
X [auth J]IPR022801Small ribosomal subunit protein uS4Family
X [auth J]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
X [auth J]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
X [auth J]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
X [auth J]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
Y [auth M]IPR000530Small ribosomal subunit protein eS12Family
Y [auth M]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
Y [auth M]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
Y [auth M]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
BA [auth W]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
BA [auth W]IPR000630Small ribosomal subunit protein uS8Family
BA [auth W]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
EA [auth b]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
EA [auth b]IPR000592Small ribosomal subunit protein eS27Family
EA [auth b]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
HA [auth g]IPR019775WD40 repeat, conserved siteConserved Site
HA [auth g]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
HA [auth g]IPR045223Small ribosomal subunit protein RACK1-likeFamily
HA [auth g]IPR020472G-protein beta WD-40 repeatRepeat
HA [auth g]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
HA [auth g]IPR001680WD40 repeatRepeat
A [auth n]IPR007836Large ribosomal subunit protein eS32Family
J [auth L]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
J [auth L]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
J [auth L]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
J [auth L]IPR000266Small ribosomal subunit protein uS17Family
J [auth L]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
L [auth Q]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
L [auth Q]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
L [auth Q]IPR000754Small ribosomal subunit protein uS9Family
L [auth Q]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
M [auth R]IPR001210Small ribosomal subunit protein eS17Family
M [auth R]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
M [auth R]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
N [auth S]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
N [auth S]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
N [auth S]IPR001892Small ribosomal subunit protein uS13Family
N [auth S]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
O [auth T]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
O [auth T]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
O [auth T]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
O [auth T]IPR001266Small ribosomal subunit protein eS19Family
P [auth U]IPR027486Small ribosomal subunit protein uS10 domainDomain
P [auth U]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
P [auth U]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
P [auth U]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
P [auth U]IPR001848Small ribosomal subunit protein uS10Family
Q [auth V]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
Q [auth V]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
Q [auth V]IPR001931Small ribosomal subunit protein eS21Family
R [auth X]IPR006032Small ribosomal subunit protein uS12Family
R [auth X]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
R [auth X]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
T [auth c]IPR028626Ribosomal protein eS28 conserved siteConserved Site
T [auth c]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
T [auth c]IPR000289Small ribosomal subunit protein eS28Family
U [auth d]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
U [auth d]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
U [auth d]IPR001209Small ribosomal subunit protein uS14Family
U [auth d]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
V [auth C]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
V [auth C]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
V [auth C]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
V [auth C]IPR000851Small ribosomal subunit protein uS5Family
V [auth C]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
V [auth C]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
V [auth C]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
W [auth G]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
W [auth G]IPR001377Small ribosomal subunit protein eS6Family
W [auth G]IPR014401Small ribosomal subunit protein eS6-likeFamily
Z [auth N]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
Z [auth N]IPR000589Small ribosomal subunit protein uS15Family
Z [auth N]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
Z [auth N]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
AA [auth O]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
AA [auth O]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
AA [auth O]IPR001971Small ribosomal subunit protein uS11Family
CA [auth Y]IPR001976Small ribosomal subunit protein eS24Family
CA [auth Y]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
CA [auth Y]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
DA [auth Z]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
DA [auth Z]IPR004977Small ribosomal subunit protein eS25Family
FA [auth e]IPR019954Ubiquitin conserved siteConserved Site
FA [auth e]IPR000626Ubiquitin-like domainDomain
FA [auth e]IPR006846Small ribosomal subunit protein eS30Family
FA [auth e]IPR039415Ubiquitin-like protein FUBIDomain
FA [auth e]IPR019956Ubiquitin domainDomain
FA [auth e]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
GA [auth f]IPR019954Ubiquitin conserved siteConserved Site
GA [auth f]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
GA [auth f]IPR000626Ubiquitin-like domainDomain
GA [auth f]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
GA [auth f]IPR002906Small ribosomal subunit protein eS31Domain
GA [auth f]IPR019956Ubiquitin domainDomain
GA [auth f]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
IA [auth A]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
IA [auth A]IPR001865Small ribosomal subunit protein uS2Family
IA [auth A]IPR032281Small ribosomal subunit protein uS2, C-terminal domainDomain
IA [auth A]IPR027504Small ribosomal subunit protein uS2, vertebratesFamily
IA [auth A]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
IA [auth A]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
IA [auth A]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
IPR015946K homology domain-like, alpha/betaHomologous Superfamily
IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
IPR004044K Homology domain, type 2Domain
IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
IPR013845Small ribosomal subunit protein eS4, central regionDomain
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
IPR002942RNA-binding S4 domainDomain
IPR000876Small ribosomal subunit protein eS4Family
IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
IPR005824KOWDomain
IPR023798Small ribosomal subunit protein uS7 domainDomain
IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
IPR000235Small ribosomal subunit protein uS7Family
IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
G [auth H]IPR000554Small ribosomal subunit protein eS7Family
G [auth H]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
H [auth I]PharosP62241
I [auth K]PharosP46783
K [auth P]PharosP62841
S [auth a]PharosP62854
X [auth J]PharosP46781
Y [auth M]PharosP25398
BA [auth W]PharosP62244
EA [auth b]PharosP42677
HA [auth g]PharosP63244
A [auth n]PharosP62945
J [auth L]PharosP62280
L [auth Q]PharosP62249
M [auth R]PharosP08708
N [auth S]PharosP62269
O [auth T]PharosP39019
P [auth U]PharosP60866
Q [auth V]PharosP63220
R [auth X]PharosP62266
T [auth c]PharosP62857
U [auth d]PharosP62273
V [auth C]PharosP15880
W [auth G]PharosP62753
Z [auth N]PharosP62277
AA [auth O]PharosP62263
CA [auth Y]PharosP62847
DA [auth Z]PharosP62851
FA [auth e]PharosP62861
GA [auth f]PharosP62979
IA [auth A]PharosP08865
PharosP23396
PharosP62701
PharosP46782
G [auth H]PharosP62081

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
Q [auth V]AME Parent Component: MET

R [auth X]HY3 Parent Component: PRO

RESIDAA0029

PSI-MOD :  3-hydroxy-L-proline MOD:00038
B [auth 2]4AC RESIDAA0029

B [auth 2]6MZ Parent Component: A

RESIDAA0029

B [auth 2]7MG Parent Component: G

RESIDAA0029

B [auth 2]A2M Parent Component: A

RESIDAA0029

B [auth 2]B8N RESIDAA0029

B [auth 2]MA6 Parent Component: A

RESIDAA0029

B [auth 2]OMC Parent Component: C

RESIDAA0029

B [auth 2]OMG Parent Component: G

RESIDAA0029

B [auth 2]OMU Parent Component: U

RESIDAA0029

B [auth 2]PSU Parent Component: U

RESIDAA0029

AA [auth O]IAS RESIDAA0029

IA [auth A]SAC Parent Component: SER

RESIDAA0029