7R3K | pdb_00007r3k

Chlamydomonas reinhardtii TSP9 mutant small Photosystem I complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
I [auth J]SCOP2B SuperfamilySubunit IX of photosystem I reaction centre, PsaJ 8094723 3000824 SCOP2B (2022-06-29)
FSCOP2B SuperfamilySubunit III of photosystem I reaction centre, PsaF 8094180 3000813 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyElectron transport accessory proteins 8094773 3000325 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyPhotosystem I subunit PsaD 8095071 3000951 SCOP2B (2022-06-29)
CSCOP2B Superfamily4Fe-4S ferredoxins 8093860 3000020 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyPhotosystem I subunits PsaA/PsaB 8094499 3000850 SCOP2B (2022-06-29)
R [auth 6]SCOP2B SuperfamilyChlorophyll a-b binding protein 8099928 3000343 SCOP2B (2022-06-29)
Q [auth 5]SCOP2B SuperfamilyChlorophyll a-b binding protein 8099932 3000343 SCOP2B (2022-06-29)
P [auth 4]SCOP2B SuperfamilyChlorophyll a-b binding protein 8099934 3000343 SCOP2B (2022-06-29)
O [auth 8]SCOP2B SuperfamilyChlorophyll a-b binding protein 8099930 3000343 SCOP2B (2022-06-29)
N [auth 7]SCOP2B SuperfamilyChlorophyll a-b binding protein 8100068 3000343 SCOP2B (2022-06-29)
M [auth 3]SCOP2B SuperfamilyChlorophyll a-b binding protein 8105868 3000343 SCOP2B (2022-06-29)
L [auth Z]SCOP2B SuperfamilyChlorophyll a-b binding protein 8099102 3000343 SCOP2B (2022-06-29)
K [auth 1]SCOP2B SuperfamilyChlorophyll a-b binding protein 8099102 3000343 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyPhotosystem I subunits PsaA/PsaB 8094461 3000850 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth J]Ribosomal_L30e7r3kJ1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
H [auth I]Ribosomal_L30e7r3kI1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
GRibosomal_L30e7r3kG1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
FRibosomal_L30e7r3kF1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
ERibosomal_L30e7r3kE1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
DRibosomal_L30e7r3kD1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
CRibosomal_L30e7r3kC1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
BRibosomal_L30e7r3kB1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
R [auth 6]Ribosomal_L30e7r3k61 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
Q [auth 5]Ribosomal_L30e7r3k51 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
P [auth 4]Ribosomal_L30e7r3k41 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
O [auth 8]Ribosomal_L30e7r3k81 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
N [auth 7]Ribosomal_L30e7r3k71 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
M [auth 3]Ribosomal_L30e7r3k31 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
L [auth Z]Ribosomal_L30e7r3kZ1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
K [auth 1]Ribosomal_L30e7r3k11 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
J [auth K]Ribosomal_L30e7r3kK1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
ARibosomal_L30e7r3kA1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
I [auth J]PF01701Photosystem I reaction centre subunit IX / PsaJ (PSI_PsaJ)Photosystem I reaction centre subunit IX / PsaJ- Family
H [auth I]PF00796Photosystem I reaction centre subunit VIII (PSI_8)Photosystem I reaction centre subunit VIII- Family
PF128384Fe-4S dicluster domain (Fer4_7)4Fe-4S dicluster domainSuperfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contai ...Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contains two 4Fe4S clusters.
Domain
PF00223Photosystem I psaA/psaB protein (PsaA_PsaB)Photosystem I psaA/psaB protein- Family
R [auth 6]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
Q [auth 5]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
P [auth 4]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
O [auth 8]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
N [auth 7]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
M [auth 3]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
K [auth 1],
L [auth Z]
PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
PF00223Photosystem I psaA/psaB protein (PsaA_PsaB)Photosystem I psaA/psaB protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth J]Photosystem I reaction center subunit IX-
H [auth I]Photosystem I reaction center subunit VIII-
Photosystem I reaction center subunit V, chloroplastic-
Photosystem I reaction center subunit III, chloroplastic-
Photosystem I reaction center subunit IV, chloroplastic-
Photosystem I reaction center subunit II, chloroplastic-
Photosystem I iron-sulfur center
Photosystem I P700 chlorophyll a apoprotein A2
R [auth 6]Chlorophyll a-b binding protein, chloroplastic
Q [auth 5]Chlorophyll a-b binding protein, chloroplastic
P [auth 4]Chlorophyll a-b binding protein, chloroplastic (Lhca4)
O [auth 8]Chlorophyll a-b binding protein, chloroplastic
N [auth 7]Chlorophyll a-b binding protein, chloroplastic
M [auth 3]Chlorophyll a-b binding protein, chloroplastic
K [auth 1],
L [auth Z]
Chlorophyll a-b binding protein, chloroplastic
J [auth K]Photosystem I reaction center subunit psaK, chloroplastic-
Photosystem I P700 chlorophyll a apoprotein A1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth J]IPR002615Photosystem I PsaJ, reaction centre subunit IXFamily
I [auth J]IPR036062Photosystem I PsaJ, reaction centre subunit IX superfamilyHomologous Superfamily
H [auth I]IPR036357Photosystem I reaction centre subunit VIII superfamilyHomologous Superfamily
H [auth I]IPR001302Photosystem I reaction centre subunit VIIIFamily
IPR023618Photosystem I PsaG/PsaK domain, chloroplasticHomologous Superfamily
IPR017494Photosystem I reaction center subunit VFamily
IPR016370Photosystem I reaction center subunit V/PsaK, plantFamily
IPR000549Photosystem I reaction center subunit V/PsaKFamily
IPR036577Photosystem I PsaF, reaction centre subunit III superfamilyHomologous Superfamily
IPR003666Photosystem I PsaF, reaction centre subunit IIIFamily
IPR008990Electron transport accessory-like domain superfamilyHomologous Superfamily
IPR003375Photosystem I PsaE, reaction centre subunit IVFamily
IPR003685Photosystem I PsaDFamily
IPR036579Photosystem I, reaction centre subunit PsaD superfamilyHomologous Superfamily
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved siteConserved Site
IPR050157Photosystem I iron-sulfur centerFamily
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainDomain
IPR017491Photosystem I protein PsaCFamily
IPR036408Photosystem I PsaA/PsaB superfamilyHomologous Superfamily
IPR001280Photosystem I PsaA/PsaBFamily
IPR006244Photosystem I PsaBFamily
IPR020586Photosystem I PsaA/PsaB, conserved siteConserved Site
R [auth 6]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
R [auth 6]IPR022796Chlorophyll A-B binding proteinFamily
Q [auth 5]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
Q [auth 5]IPR022796Chlorophyll A-B binding proteinFamily
P [auth 4]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
P [auth 4]IPR022796Chlorophyll A-B binding proteinFamily
O [auth 8]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
O [auth 8]IPR022796Chlorophyll A-B binding proteinFamily
N [auth 7]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
N [auth 7]IPR022796Chlorophyll A-B binding proteinFamily
M [auth 3]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
M [auth 3]IPR022796Chlorophyll A-B binding proteinFamily
K [auth 1],
L [auth Z]
IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
K [auth 1],
L [auth Z]
IPR022796Chlorophyll A-B binding proteinFamily
J [auth K]IPR023618Photosystem I PsaG/PsaK domain, chloroplasticHomologous Superfamily
J [auth K]IPR016370Photosystem I reaction center subunit V/PsaK, plantFamily
J [auth K]IPR000549Photosystem I reaction center subunit V/PsaKFamily
J [auth K]IPR017493Photosystem I reaction center subunit psaK, plantFamily
IPR006243Photosystem I PsaAFamily
IPR036408Photosystem I PsaA/PsaB superfamilyHomologous Superfamily
IPR001280Photosystem I PsaA/PsaBFamily
IPR020586Photosystem I PsaA/PsaB, conserved siteConserved Site