7R2K | pdb_00007r2k

elongated Cascade complex from type I-A CRISPR-Cas system


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
L [auth M]SCOP2B SuperfamilyCRISPR-associated proteins 8052193 3001554 SCOP2B (2022-06-29)
V [auth W]SCOP2B SuperfamilyCRISPR-associated proteins 8052193 3001554 SCOP2B (2022-06-29)
U [auth V]SCOP2B SuperfamilyCRISPR-associated proteins 8052193 3001554 SCOP2B (2022-06-29)
S [auth T]SCOP2B SuperfamilyCRISPR-associated proteins 8052193 3001554 SCOP2B (2022-06-29)
Q [auth R]SCOP2B SuperfamilyCRISPR-associated proteins 8052193 3001554 SCOP2B (2022-06-29)
O [auth P]SCOP2B SuperfamilyCRISPR-associated proteins 8052193 3001554 SCOP2B (2022-06-29)
N [auth O]SCOP2B SuperfamilyCRISPR-associated proteins 8052193 3001554 SCOP2B (2022-06-29)
M [auth N]SCOP2B SuperfamilyCRISPR-associated proteins 8052193 3001554 SCOP2B (2022-06-29)
K [auth L]SCOP2B SuperfamilyCRISPR-associated proteins 8052193 3001554 SCOP2B (2022-06-29)
J [auth K]SCOP2B SuperfamilyCRISPR-associated proteins 8052193 3001554 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00270DEAD/DEAH box helicase (DEAD)DEAD/DEAH box helicaseMembers of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome ...Members of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome biogenesis, nucleocytoplasmic transport, translation, RNA decay and organellar gene expression.
Domain
PF22590CRISPR-associated nuclease/helicase Cas3, C-terminal (Cas3-like_C_2)CRISPR-associated nuclease/helicase Cas3, C-terminalThis entry represents the C-terminal domain of CRISPR-associated nuclease/helicase Cas3 subtype I-F/YPEST from Pseudomonas aeruginosa (Cas3), a DNA-degradation enzyme that forms part of the CRISPR-Cas bacterial immune system. Cas3 contains a Cas2 dom ...This entry represents the C-terminal domain of CRISPR-associated nuclease/helicase Cas3 subtype I-F/YPEST from Pseudomonas aeruginosa (Cas3), a DNA-degradation enzyme that forms part of the CRISPR-Cas bacterial immune system. Cas3 contains a Cas2 domain, an HD nuclease domain (Pfam:PF18019), RecA1, RecA2, a long linker region, and a C-terminal domain (this entry). This domain contains two alpha-helices and two six-stranded beta-blades [6].
Domain
PF01905CRISPR-associated negative auto-regulator DevR/Csa2 (DevR)CRISPR-associated negative auto-regulator DevR/Csa2- Family
P [auth Q]PF18019Cas3, HD domain (Cas3_HD)Cas3, HD domainThis HD domain is found at the N-terminus of Cas3 enzymes fused to a helicase domain. This domain is sometimes found as a separate protein. It acts as a nuclease that cleaves ssDNA. Domain
X [auth Y]PF09703CRISPR-associated protein (Cas_Csa4) (Cas_Csa4)CRISPR-associated protein (Cas_Csa4)- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
CRISPR-associated helicase Cas3
Cas11a- - -
Cas7a- -
P [auth Q]CRISPR-associated endonuclease Cas3-HD -
R [auth S]Type I-A CRISPR-associated protein Cas5- -
T [auth U]crRNA (57-MER)---
W [auth X]DNA (5'-D(P*TP*CP*CP*C)-3')---
X [auth Y]Cas8- - -
C [auth D]DNA (5'-D(P*TP*AP*CP*AP*AP*GP*GP*GP*A)-3')---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR001650Helicase, C-terminal domain-likeDomain
IPR050079DEAD box RNA helicaseFamily
IPR014001Helicase superfamily 1/2, ATP-binding domainDomain
IPR054712CRISPR-associated nuclease/helicase Cas3 domainDomain
IPR006474Helicase Cas3, CRISPR-associated, coreDomain
IPR011545DEAD/DEAH-box helicase domainDomain
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR002764CRISPR-associated protein Cas7/Cst2/DevR, subtype I-a/ApernFamily
IPR052681CRISPR-associated Cas7/Cst2/DevRFamily
IPR010154CRISPR-associated protein Cas7/Cst2/DevRFamily
P [auth Q]IPR038257CRISPR-associated Cas3-type HD domain superfamilyHomologous Superfamily
P [auth Q]IPR006483CRISPR-associated Cas3-type, HD domainDomain
R [auth S]IPR053725CRISPR-associated Cas5Homologous Superfamily
R [auth S]IPR010153CRISPR-associated protein, Cas5a typeFamily
R [auth S]IPR013422CRISPR-associated protein Cas5, N-terminalDomain
X [auth Y]IPR010184CRISPR-associated protein, MJ0385Family