7QTM
Transition state analogue of small G protein in complex with relevant GAP
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth H] | SCOP2B Superfamily | GTPase activation domain GAP | 8038518 | 3001163 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | GTPase activation domain GAP | 8038518 | 3001163 | SCOP2B (2022-06-29) |
D [auth I] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8057414 | 3002022 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Ras-like P-loop GTPases | 8057414 | 3002022 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth H] | PF00620 | e7qtmH1 | A: alpha bundles | X: GTPase activation domain, GAP (From Topology) | H: GTPase activation domain, GAP (From Topology) | T: GTPase activation domain, GAP | F: PF00620 | ECOD (1.6) |
A | PF00620 | e7qtmA1 | A: alpha bundles | X: GTPase activation domain, GAP (From Topology) | H: GTPase activation domain, GAP (From Topology) | T: GTPase activation domain, GAP | F: PF00620 | ECOD (1.6) |
D [auth I] | PF00071 | e7qtmI1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00071 | ECOD (1.6) |
B | PF00071 | e7qtmB1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00071 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C [auth H] | PF00620 | RhoGAP domain (RhoGAP) | RhoGAP domain | GTPase activator proteins towards Rho/Rac/Cdc42-like small GTPases. | Domain |
B, D [auth I] | PF00071 | Ras family (Ras) | Ras family | Includes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See Pfam:PF00009 Pfam:PF00025, Pfam:PF00063. As regards Rab GTPases, these are important regulators of vesicle formation, motil ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, C [auth H] | IPR001251 | CRAL-TRIO lipid binding domain | Domain |
A, C [auth H] | IPR000198 | Rho GTPase-activating protein domain | Domain |
A, C [auth H] | IPR036865 | CRAL-TRIO lipid binding domain superfamily | Homologous Superfamily |
A, C [auth H] | IPR008936 | Rho GTPase activation protein | Homologous Superfamily |
A, C [auth H] | IPR049592 | Rho GTPase-activating protein 1, RhoGAP domain | Domain |
B, D [auth I] | IPR001806 | Small GTPase | Family |
B, D [auth I] | IPR003578 | Small GTPase Rho | Family |
B, D [auth I] | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |
B, D [auth I] | IPR005225 | Small GTP-binding protein domain | Domain |