7QOO | pdb_00007qoo

Structure of the human inner kinetochore CCAN complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
F [auth M]SCOP2B SuperfamilyRas-like P-loop GTPases 8092489 3002022 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
N [auth W]CENP-We7qooW1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: CENP-WECOD (1.6)
F [auth M]CENP-Me7qooM1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: CENP-MECOD (1.6)
M [auth T]CENP-T_Ce7qooT1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: CENP-T_CECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
E [auth L]PF13092Centromere protein L (CENP-L)Centromere protein L- Family
I [auth P]PF13096CENP-A-nucleosome distal (CAD) centromere subunit, CENP-P (CENP-P)CENP-A-nucleosome distal (CAD) centromere subunit, CENP-P- Family
H [auth O]PF09496Cenp-O kinetochore centromere component (CENP-O)Cenp-O kinetochore centromere component- Family
G [auth N]PF05238Kinetochore protein CHL4 like (CENP-N)Kinetochore protein CHL4 like- Family
F [auth M]PF11111Centromere protein M (CENP-M) (CENP-M)Centromere protein M (CENP-M)- Family
B [auth H]PF05837Centromere protein H (CENP-H) (CENP-H)Centromere protein H (CENP-H)This family consists of several eukaryotic centromere protein H (CENP-H) sequences. Macromolecular centromere-kinetochore complex plays a critical role in sister chromatid separation, but its complete protein composition as well as its precise dynami ...This family consists of several eukaryotic centromere protein H (CENP-H) sequences. Macromolecular centromere-kinetochore complex plays a critical role in sister chromatid separation, but its complete protein composition as well as its precise dynamic function during mitosis has not yet been clearly determined. CENP-H contains a coiled-coil structure and a nuclear localisation signal. CENP-H is specifically and constitutively localised in kinetochores throughout the cell cycle. CENP-H may play a role in kinetochore organisation and function throughout the cell cycle [1]. This the C-terminus of the region, which is conserved from fungi to humans.
Domain
K [auth Q]PF13094CENP-Q, a CENPA-CAD centromere complex subunit (CENP-Q)CENP-Q, a CENPA-CAD centromere complex subunit- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
D [auth K]Centromere protein K-
E [auth L]Centromere protein L-
J [auth U]Centromere protein U-
N [auth W]Centromere protein W
O [auth X]Unknown protein---
I [auth P]Centromere protein P-
H [auth O]Centromere protein O-
G [auth N]Centromere protein N-
F [auth M]Centromere protein M-
C [auth I]Centromere protein I-
B [auth H]Centromere protein H
M [auth T]Centromere protein T
L [auth R]Centromere protein R-
K [auth Q]Centromere protein Q-
A [auth C]Centromere protein C

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
D [auth K]IPR020993Centromere protein Cenp-KFamily
E [auth L]IPR025204Centromere subunit LFamily
J [auth U]IPR025214Centromere protein UFamily
N [auth W]IPR028847Centromere protein WFamily
N [auth W]IPR009072Histone-foldHomologous Superfamily
N [auth W]IPR052484Centromere Protein W/WIP1Family
I [auth P]IPR027801Centromere protein PFamily
H [auth O]IPR018464Centromere protein OFamily
G [auth N]IPR052011Centromere-associated NAC/CAD complex proteinFamily
G [auth N]IPR007902Centromere protein Chl4/mis15/CENP-NFamily
F [auth M]IPR020987Centromere protein Cenp-MFamily
F [auth M]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
C [auth I]IPR012485Centromere protein IFamily
B [auth H]IPR008426Centromere protein H, C-terminalDomain
B [auth H]IPR040034Centromere protein HFamily
M [auth T]IPR009072Histone-foldHomologous Superfamily
M [auth T]IPR032373Centromere kinetochore component CENP-T, N-terminal domainDomain
M [auth T]IPR028255Centromere protein TFamily
M [auth T]IPR035425CENP-T/Histone H4, histone foldDomain
L [auth R]IPR009601Centromere protein RFamily
K [auth Q]IPR025212Centromere protein QFamily
A [auth C]IPR028052Kinetochore assembly subunit CENP-C, N-terminal domainDomain
A [auth C]IPR025974Mif2/CENP-C cupin domainDomain
A [auth C]IPR028386Centromere protein C/Mif2/cnp3Family
A [auth C]IPR028931CENP-C, middle DNMT3B-binding domainDomain
A [auth C]IPR014710RmlC-like jelly roll foldHomologous Superfamily
A [auth C]IPR011051RmlC-like cupin domain superfamilyHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
D [auth K]PharosQ9BS16
E [auth L]PharosQ8N0S6
J [auth U]PharosQ71F23
N [auth W]PharosQ5EE01
I [auth P]PharosQ6IPU0
H [auth O]PharosQ9BU64
G [auth N]PharosQ96H22
F [auth M]PharosQ9NSP4
C [auth I]PharosQ92674
B [auth H]PharosQ9H3R5
M [auth T]PharosQ96BT3
L [auth R]PharosQ13352
K [auth Q]PharosQ7L2Z9
A [auth C]PharosQ03188