7QI4

Human mitochondrial ribosome at 2.2 A resolution (bound to partly built tRNAs and mRNA)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
K [auth AK]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052599 3000068 SCOP2B (2022-06-29)
J [auth AJ]SCOP2B SuperfamilyNucleic acid-binding proteins8095431 3000135 SCOP2B (2022-06-29)
R [auth AR]SCOP2B SuperfamilyMitochondrial 28S ribosomal protein S22-like8051932 3002074 SCOP2B (2022-06-29)
B [auth AB]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8063850 3001397 SCOP2B (2022-06-29)
Y [auth AY]SCOP2B SuperfamilyMitochondrial 28S ribosomal protein S31-like8090914 3002471 SCOP2B (2022-06-29)
AA [auth A0]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8091481 3000334 SCOP2B (2022-06-29)
MA [auth F]SCOP2B SuperfamilyRibosomal protein L48080706 3001146 SCOP2B (2022-06-29)
QA [auth K]SCOP2B SuperfamilyRibosomal protein L138100460 3001134 SCOP2B (2022-06-29)
RA [auth L]SCOP2B Superfamily50S Ribosomal protein L14-like8072072 3000433 SCOP2B (2022-06-29)
UA [auth O]SCOP2B SuperfamilyProkaryotic ribosomal protein L178033689 3000995 SCOP2B (2022-06-29)
HB [auth 1]SCOP2B SuperfamilyZn-binding ribosomal proteins8075050 3001320 SCOP2B (2022-06-29)
KB [auth 4]SCOP2B SuperfamilyRibosomal protein L368083324 3001346 SCOP2B (2022-06-29)
PB [auth 9]SCOP2B SuperfamilyMitochondrial ribosomal protein L27-like8053893 3002240 SCOP2B (2022-06-29)
I [auth AI]SCOP2B SuperfamilyTranslational machinery components8098948 3000571 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
K [auth AK]PF00253e7qi4AK1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
J [auth AJ]PF00164e7qi4AJ1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
L [auth AL]PF00312e7qi4AL1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
M [auth AM]PF00886e7qi4AM1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: PF00886ECOD (1.6)
N [auth AN]PF00366e7qi4AN1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366ECOD (1.6)
O [auth AO]PF01084e7qi4AO1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF01084ECOD (1.6)
P [auth AP]PF01084e7qi4AP1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF01084ECOD (1.6)
Q [auth AQ]PF01165e7qi4AQ1 A: extended segmentsX: 30S ribosomal protein S21 (From Topology)H: 30S ribosomal protein S21 (From Topology)T: 30S ribosomal protein S21F: PF01165ECOD (1.6)
R [auth AR]PF10245e7qi4AR1 A: a+b complex topologyX: Mitoribosomal protein mS22 (From Topology)H: Mitoribosomal protein mS22 (From Topology)T: Mitoribosomal protein mS22F: PF10245ECOD (1.6)
S [auth AS]PF10484e7qi4AS1 A: alpha arraysX: RuvA-CH: Mitoribosomal protein mS23 (From Topology)T: Mitoribosomal protein mS23F: PF10484ECOD (1.6)
B [auth AB]PF00318e7qi4AB1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
T [auth AT]PF05047e7qi4AT1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: PF05047ECOD (1.6)
U [auth AU]PF14943e7qi4AU1 A: extended segmentsX: Mitoribosomal protein mS26 (From Topology)H: Mitoribosomal protein mS26 (From Topology)T: Mitoribosomal protein mS26F: PF14943ECOD (1.6)
V [auth AV]PF10037e7qi4AV1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: PF10037ECOD (1.6)
W [auth AW]PF10246e7qi4AW1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF10246ECOD (1.6)
X [auth AX]PF10236e7qi4AX2 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF10236ECOD (1.6)
X [auth AX]PF10236e7qi4AX1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF10236ECOD (1.6)
Y [auth AY]PF15433e7qi4AY1 A: extended segmentsX: Mitoribosomal protein mS31 (From Topology)H: Mitoribosomal protein mS31 (From Topology)T: Mitoribosomal protein mS31F: PF15433ECOD (1.6)
Z [auth AZ]PF08293e7qi4AZ1 A: extended segmentsX: Mitoribosomal protein mS33 (From Topology)H: Mitoribosomal protein mS33 (From Topology)T: Mitoribosomal protein mS33F: PF08293ECOD (1.6)
AA [auth A0]PF16053e7qi4A01 A: beta barrelsX: SH3H: Mitoribosomal protein mS34 (From Topology)T: Mitoribosomal protein mS34F: PF16053ECOD (1.6)
BA [auth A1]PF10213e7qi4A11 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: PF10213ECOD (1.6)
CA [auth A2]PF06747e7qi4A21 A: few secondary structure elementsX: p8-MTCP1-related (From Topology)H: p8-MTCP1-related (From Topology)T: p8-MTCP1-relatedF: PF06747ECOD (1.6)
C [auth AC]PF14955e7qi4AC1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF14955ECOD (1.6)
DA [auth A3]PF08213e7qi4A31 A: extended segmentsX: Mitoribosomal protein mS38 (From Topology)H: Mitoribosomal protein mS38 (From Topology)T: Mitoribosomal protein mS38F: PF08213ECOD (1.6)
KA [auth D]PF00181e7qi4D1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
KA [auth D]PF03947e7qi4D2 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
LA [auth E]PF00297e7qi4E1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
MA [auth F]PF00573e7qi4F1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
D [auth AD]PF03719e7qi4AD3 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
D [auth AD]PF00333e7qi4AD2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
D [auth AD]PF21251e7qi4AD1 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: PF21251ECOD (1.6)
NA [auth H]PF01281e7qi4H1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: PF01281ECOD (1.6)
NA [auth H]PF22078e7qi4H2 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: PF22078ECOD (1.6)
PA [auth J]PF00298e7qi4J1 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: PF00298ECOD (1.6)
PA [auth J]PF03946e7qi4J2 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: PF03946ECOD (1.6)
QA [auth K]PF00572e7qi4K1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
RA [auth L]PF00238e7qi4L1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
SA [auth M]PF00828e7qi4M1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
TA [auth N]PF00252e7qi4N1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
UA [auth O]PF01196e7qi4O1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: PF01196ECOD (1.6)
VA [auth P]PF00861e7qi4P1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00861ECOD (1.6)
WA [auth Q]PF01245e7qi4Q1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01245ECOD (1.6)
E [auth AE]PF01250e7qi4AE1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: PF01250ECOD (1.6)
XA [auth R]PF00453e7qi4R1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: PF00453ECOD (1.6)
YA [auth S]PF00829e7qi4S1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: PF00829ECOD (1.6)
ZA [auth T]PF00237e7qi4T1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
AB [auth U]PF00276e7qi4U1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276ECOD (1.6)
BB [auth V]PF00467,PF17136e7qi4V1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF17136ECOD (1.6)
CB [auth W]PF01016e7qi4W1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: PF01016ECOD (1.6)
DB [auth X]PF00830e7qi4X1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: PF00830ECOD (1.6)
EB [auth Y]PF06984e7qi4Y1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF06984ECOD (1.6)
FB [auth Z]PF00327e7qi4Z1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327ECOD (1.6)
GB [auth 0]PF01783e7qi401 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01783ECOD (1.6)
F [auth AF]PF00177e7qi4AF1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
HB [auth 1]PF00471e7qi411 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00471ECOD (1.6)
IB [auth 2]PF00468e7qi421 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: PF00468ECOD (1.6)
JB [auth 3]PF01632e7qi431 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: PF01632ECOD (1.6)
KB [auth 4]PF00444e7qi441 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: PF00444ECOD (1.6)
LB [auth 5]PF07147e7qi451 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: PF07147ECOD (1.6)
MB [auth 6]PF01161e7qi461 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: PEBP-likeF: PF01161ECOD (1.6)
NB [auth 7]PF02824e7qi472 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: PF02824ECOD (1.6)
NB [auth 7]F_UNCLASSIFIEDe7qi471 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: ThrRS/AlaRS editing domainF: F_UNCLASSIFIEDECOD (1.6)
OB [auth 8]PF09812e7qi481 A: extended segmentsX: Mitochondrial 54S ribosomal protein L28 (From Topology)H: Mitochondrial 54S ribosomal protein L28 (From Topology)T: Mitochondrial 54S ribosomal protein L28F: PF09812ECOD (1.6)
PB [auth 9]PF09809e7qi491 A: extended segmentsX: Mitochondrial 54S ribosomal protein L27 (From Topology)H: Mitochondrial 54S ribosomal protein L27 (From Topology)T: Mitochondrial 54S ribosomal protein L27F: PF09809ECOD (1.6)
QB [auth a]PF10210e7qi4a1 A: extended segmentsX: Mitoribosomal protein mL42 (From Topology)H: Mitoribosomal protein mL42 (From Topology)T: Mitoribosomal protein mL42F: PF10210ECOD (1.6)
G [auth AG]PF00380e7qi4AG1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
RB [auth b]PF05047e7qi4b1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: PF05047ECOD (1.6)
SB [auth c]PF22935e7qi4c2 A: alpha arraysX: RNase III catalytic domain-like (From Topology)H: RNase III catalytic domain-like (From Topology)T: RNase III catalytic domain-likeF: PF22935ECOD (1.6)
SB [auth c]PF22892e7qi4c1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF22892ECOD (1.6)
TB [auth d]PF04280e7qi4d1 A: a+b two layersX: Cystatin-likeH: NTF2-like (From Topology)T: NTF2-likeF: PF04280ECOD (1.6)
UB [auth e]PF11788e7qi4e1 A: a+b two layersX: beta-GraspH: Nudix (From Topology)T: NudixF: PF11788ECOD (1.6)
VB [auth f]PF00338e7qi4f1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
WB [auth g]PF05046e7qi4g1 A: a+b two layersX: Glucose permease domain IIB-likeH: eIF1-like (From Topology)T: eIF1-likeF: PF05046ECOD (1.6)
XB [auth h]PF10501e7qi4h1 A: alpha bundlesX: ACP-likeH: Acyl-carrier protein (ACP) (From Topology)T: Acyl-carrier protein (ACP)F: PF10501ECOD (1.6)
YB [auth i]PF10244e7qi4i1 A: alpha bundlesX: Long alpha-hairpinH: Mitoribosomal protein mL51 (From Topology)T: Mitoribosomal protein mL51F: PF10244ECOD (1.6)
ZB [auth j]PF18699e7qi4j1 A: extended segmentsX: Mitoribosomal protein mL52 (From Topology)H: Mitoribosomal protein mL52 (From Topology)T: Mitoribosomal protein mL52F: PF18699ECOD (1.6)
AC [auth k]PF10780e7qi4k1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: PF10780ECOD (1.6)
H [auth AH]PF00338e7qi4AH1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
DC [auth o]PF14978e7qi4o1 A: extended segmentsX: Mitoribosomal protein mL63 (From Topology)H: Mitoribosomal protein mL63 (From Topology)T: Mitoribosomal protein mL63F: PF14978ECOD (1.6)
EC [auth p]PF00472e7qi4p1 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: PF00472ECOD (1.6)
GC [auth r]PF01084e7qi4r1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF01084ECOD (1.6)
HC [auth s]PF07147e7qi4s1 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: PF07147ECOD (1.6)
IC [auth t]PF16320e7qi4t1 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: PF16320ECOD (1.6)
JC [auth u]PF16320e7qi4u1 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: PF16320ECOD (1.6)
KC [auth v]PF16320e7qi4v1 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: PF16320ECOD (1.6)
LC [auth w]PF16320e7qi4w1 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: PF16320ECOD (1.6)
MC [auth x]PF16320e7qi4x1 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: PF16320ECOD (1.6)
NC [auth y]PF16320e7qi4y1 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: PF16320ECOD (1.6)
OC [auth z]F_UNCLASSIFIEDe7qi4z1 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: F_UNCLASSIFIEDECOD (1.6)
I [auth AI]PF00411e7qi4AI1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
K [auth AK]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
J [auth AJ]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
L [auth AL]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
M [auth AM]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
N [auth AN]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
O [auth AO]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
P [auth AP]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
Q [auth AQ]PF01165Ribosomal protein S21 (Ribosomal_S21)Ribosomal protein S21- Family
R [auth AR]PF10245Mitochondrial 28S ribosomal protein S22 (MRP-S22)Mitochondrial 28S ribosomal protein S22- Family
S [auth AS]PF10484Mitochondrial ribosomal protein S23 (MRP-S23)Mitochondrial ribosomal protein S23- Family
B [auth AB]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
T [auth AT]PF05047Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)Mitochondrial ribosomal protein L51 / S25 / CI-B8 domainThe proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.
Domain
U [auth AU]PF14943Mitochondrial ribosome subunit S26 (MRP-S26)Mitochondrial ribosome subunit S26- Family
V [auth AV]PF10037Mitochondrial 28S ribosomal protein S27 (MRP-S27)Mitochondrial 28S ribosomal protein S27- Repeat
W [auth AW]PF10246Mitochondrial ribosomal protein MRP-S35 (MRP-S35)Mitochondrial ribosomal protein MRP-S35- Family
X [auth AX]PF10236Mitochondrial ribosomal death-associated protein 3 (DAP3)Mitochondrial ribosomal death-associated protein 3- Family
Y [auth AY]PF15433Mitochondrial 28S ribosomal protein S31 (MRP-S31)Mitochondrial 28S ribosomal protein S31- Family
Z [auth AZ]PF08293Mitochondrial ribosomal subunit S27 (MRP-S33)Mitochondrial ribosomal subunit S27- Family
AA [auth A0]PF16053Mitochondrial 28S ribosomal protein S34 (MRP-S34)Mitochondrial 28S ribosomal protein S34- Family
BA [auth A1]PF10213Mitochondrial ribosomal subunit protein (MRP-S28)Mitochondrial ribosomal subunit protein- Family
CA [auth A2]PF06747CHCH domain (CHCH)CHCH domainwe have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extende ...we have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extended) and C (C-terminal extended) subgroups. All three sub-groups of proteins have in common that they contain a predicted conserved [coiled coil 1]-[helix 1]-[coiled coil 2]-[helix 2] domain (CHCH domain). Within each helix of the CHCH domain, there are two cysteines present in a C-X9-C motif. The N-group contains an additional double helix domain, and each helix contains the C-X9-C motif. This family contains a number of characterised proteins: Cox19 protein - a nuclear gene of Saccharomyces cerevisiae, codes for an 11-kDa protein (Cox19p) required for expression of cytochrome oxidase. Because cox19 mutants are able to synthesise the mitochondrial and nuclear gene products of cytochrome oxidase, Cox19p probably functions post-translationally during assembly of the enzyme. Cox19p is present in the cytoplasm and mitochondria, where it exists as a soluble intermembrane protein. This dual location is similar to what was previously reported for Cox17p, a low molecular weight copper protein thought to be required for maturation of the CuA centre of subunit 2 of cytochrome oxidase. Cox19p have four conserved potential metal ligands, these are three cysteines and one histidine. Mrp10 - belongs to the class of yeast mitochondrial ribosomal proteins that are essential for translation [2]. Eukaryotic NADH-ubiquinone oxidoreductase 19 kDa (NDUFA8) subunit [3]. The CHCH domain was previously called DUF657 [4].
Domain
C [auth AC]PF14955Mitochondrial ribosome subunit S24 (MRP-S24)Mitochondrial ribosome subunit S24- Family
DA [auth A3]PF08213Mitochondrial mRNA-processing protein COX24, C-terminal (COX24_C)Mitochondrial mRNA-processing protein COX24, C-terminalThis domain of unknown function is found at the C terminal end of Mitochondrial small ribosomal subunit protein mS38, also known as Mitochondrial mRNA-processing protein COX24 in yeast which is involved in the splicing of the COX1 mRNA [1]. COX24 is ...This domain of unknown function is found at the C terminal end of Mitochondrial small ribosomal subunit protein mS38, also known as Mitochondrial mRNA-processing protein COX24 in yeast which is involved in the splicing of the COX1 mRNA [1]. COX24 is a component of the mitochondrial ribosome (mitoribosome), responsible for the synthesis of mitochondrial genome-encoded proteins, including at least some of the essential transmembrane subunits of the mitochondrial respiratory chain. The mitoribosomes are attached to the mitochondrial inner membrane and translation products are cotranslationally integrated into the membrane [2,3]. This domain is also found in COX24 mammalian homologue Aurora kinase A-interacting protein [4]. This entry also includes uncharacterised proteins from bacteria.
Domain
EA [auth A4]PF13812Pentatricopeptide repeat domain (PPR_3)Pentatricopeptide repeat domain- Repeat
EA [auth A4]PF13041PPR repeat family (PPR_2)PPR repeat family- Repeat
KA [auth D]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
KA [auth D]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
LA [auth E]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
MA [auth F]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
D [auth AD]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
D [auth AD]PF2125140S ribosomal protein rpS2 (S5p), N-terminal (S5p_N)40S ribosomal protein rpS2 (S5p), N-terminalThis entry represents an extension found at the N-terminal of mammalian 28S ribosomal protein S5 [1,2]. This lines a part of the mRNA entry path and connects the 28S subunit body to the head forming a latch across the mRNA channel entrance [2].Domain
D [auth AD]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
NA [auth H]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
OA [auth I]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
PA [auth J]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
PA [auth J]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
QA [auth K]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
RA [auth L]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
SA [auth M]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
TA [auth N]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
UA [auth O]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
VA [auth P]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
WA [auth Q]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
E [auth AE]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
XA [auth R]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
YA [auth S]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
ZA [auth T]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
AB [auth U]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
BB [auth V]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
BB [auth V]PF00467KOW motif (KOW)KOW motif- Family
CB [auth W]PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
DB [auth X]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
EB [auth Y]PF06984Mitochondrial 39-S ribosomal protein L47 (MRP-L47) (MRP-L47)Mitochondrial 39-S ribosomal protein L47 (MRP-L47)- Family
FB [auth Z]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
GB [auth 0]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
F [auth AF]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
HB [auth 1]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
IB [auth 2]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
JB [auth 3]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
KB [auth 4]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36- Domain
LB [auth 5]PF07147Mitochondrial 28S ribosomal protein S30 (PDCD9) (PDCD9)Mitochondrial 28S ribosomal protein S30 (PDCD9)- Family
MB [auth 6]PF01161Phosphatidylethanolamine-binding protein (PBP)Phosphatidylethanolamine-binding protein- Domain
OB [auth 8]PF09812Mitochondrial ribosomal protein L28 (MRP-L28)Mitochondrial ribosomal protein L28- Family
PB [auth 9]PF09809Mitochondrial ribosomal protein L27 (MRP-L27)Mitochondrial ribosomal protein L27- Family
QB [auth a]PF10210Mitochondrial 28S ribosomal protein S32 (MRP-S32)Mitochondrial 28S ribosomal protein S32- Family
G [auth AG]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
RB [auth b]PF05047Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)Mitochondrial ribosomal protein L51 / S25 / CI-B8 domainThe proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.
Domain
TB [auth d]PF04280Tim44-like domain (Tim44)Tim44-like domainTim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostati ...Tim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostatic interactions and by penetrating the polar head group region [1]. This family includes the C-terminal region of Tim44 that has been shown to form a stable proteolytic fragment in yeast. This region is also found in a set of smaller bacterial proteins. The molecular function of the bacterial members of this family is unknown but transport seems likely. The crystal structure of the C terminal of Tim44 has revealed a large hydrophobic pocket which might play an important role in interacting with the acyl chains of lipid molecules in the mitochondrial membrane [3].
Domain
UB [auth e]PF1178839S mitochondrial ribosomal protein L46 (MRP-L46)39S mitochondrial ribosomal protein L46- Family
VB [auth f]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
WB [auth g]PF05046Mitochondrial large subunit ribosomal protein (Img2) (Img2)Mitochondrial large subunit ribosomal protein (Img2)This family of proteins have been identified as part of the mitochondrial large ribosomal subunit in yeast [1].Domain
XB [auth h]PF10501Ribosomal subunit 39S (Ribosomal_L50)Ribosomal subunit 39SThe 39S ribosomal protein appears to be a subunit of one of the larger mitochondrial 66S or 70S units [1]. Under conditions of ethanol-stress in rats the larger subunit is largely dissociated into its smaller components [2]. In E. coli, in the absenc ...The 39S ribosomal protein appears to be a subunit of one of the larger mitochondrial 66S or 70S units [1]. Under conditions of ethanol-stress in rats the larger subunit is largely dissociated into its smaller components [2]. In E. coli, in the absence of the enzyme pseudouridine synthase (RluD) synthase, there is an accumulation of 50S and 30S subunits and the appearance of abnormal particles (62S and 39S), with concomitant loss of 70S ribosomes [2].
Domain
YB [auth i]PF10244Mitochondrial ribosomal subunit (MRP-L51)Mitochondrial ribosomal subunit- Family
ZB [auth j]PF18699Mitoribosomal protein mL52 (MRPL52)Mitoribosomal protein mL52- Family
AC [auth k]PF1078039S ribosomal protein L53/MRP-L53 (MRP_L53)39S ribosomal protein L53/MRP-L53- Family
H [auth AH]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
BC [auth l]PF08561Mitochondrial ribosomal protein L37 (Ribosomal_L37)Mitochondrial ribosomal protein L37- Family
CC [auth m]PF09776Mitochondrial ribosomal protein L55 (Mitoc_L55)Mitochondrial ribosomal protein L55- Family
DC [auth o]PF14978Mitochondrial ribosome protein 63 (MRP-63)Mitochondrial ribosome protein 63- Family
FC [auth q]PF10147Growth arrest and DNA-damage-inducible proteins-interacting protein 1 (CR6_interact)Growth arrest and DNA-damage-inducible proteins-interacting protein 1- Family
GC [auth r]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
HC [auth s]PF07147Mitochondrial 28S ribosomal protein S30 (PDCD9) (PDCD9)Mitochondrial 28S ribosomal protein S30 (PDCD9)- Family
PF16320Ribosomal protein L7/L12 dimerisation domain (Ribosomal_L12_N)Ribosomal protein L7/L12 dimerisation domainThis is the N-terminal dimerisation domain of ribosomal protein L7/L12 [1].Domain
OC [auth z]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10.Domain
I [auth AI]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth AA]12S mitochondrial rRNA---
K [auth AK]28S ribosomal protein S14, mitochondrial
J [auth AJ]28S ribosomal protein S12, mitochondrial
L [auth AL]28S ribosomal protein S15, mitochondrial
M [auth AM]28S ribosomal protein S16, mitochondrial
N [auth AN]28S ribosomal protein S17, mitochondrial
O [auth AO]28S ribosomal protein S18b, mitochondrial
P [auth AP]28S ribosomal protein S18c, mitochondrial
Q [auth AQ]MRPS21 isoform 1
R [auth AR]28S ribosomal protein S22, mitochondrial
S [auth AS]28S ribosomal protein S23, mitochondrial
B [auth AB]28S ribosomal protein S2, mitochondrial
T [auth AT]28S ribosomal protein S25, mitochondrial
U [auth AU]28S ribosomal protein S26, mitochondrial
V [auth AV]28S ribosomal protein S27, mitochondrial
W [auth AW]28S ribosomal protein S28, mitochondrial
X [auth AX]28S ribosomal protein S29, mitochondrial
Y [auth AY]28S ribosomal protein S31, mitochondrial
Z [auth AZ]28S ribosomal protein S33, mitochondrial
AA [auth A0]28S ribosomal protein S34, mitochondrial
BA [auth A1]28S ribosomal protein S35, mitochondrial
CA [auth A2]Coiled-coil-helix-coiled-coil-helix domain-containing protein 1
C [auth AC]28S ribosomal protein S24, mitochondrial
DA [auth A3]Aurora kinase A-interacting protein-
EA [auth A4]Pentatricopeptide repeat domain-containing protein 3, mitochondrial
FA [auth Aw]A/A-tRNA---
GA [auth Ax]P/P-tRNA---
HA [auth Az]mRNA---
IA [auth A]16S mitochondrial rRNA---
JA [auth B]mitochondrial tRNAVal---
KA [auth D]39S ribosomal protein L2, mitochondrial
LA [auth E]39S ribosomal protein L3, mitochondrial
MA [auth F]39S ribosomal protein L4, mitochondrial
D [auth AD]28S ribosomal protein S5, mitochondrial
NA [auth H]39S ribosomal protein L9, mitochondrial
OA [auth I]39S ribosomal protein L10, mitochondrial
PA [auth J]39S ribosomal protein L11, mitochondrial
QA [auth K]39S ribosomal protein L13, mitochondrial
RA [auth L]39S ribosomal protein L14, mitochondrial
SA [auth M]39S ribosomal protein L15, mitochondrial
TA [auth N]39S ribosomal protein L16, mitochondrial
UA [auth O]39S ribosomal protein L17, mitochondrial
VA [auth P]39S ribosomal protein L18, mitochondrial
WA [auth Q]39S ribosomal protein L19, mitochondrial
E [auth AE]28S ribosomal protein S6, mitochondrial
XA [auth R]39S ribosomal protein L20, mitochondrial
YA [auth S]39S ribosomal protein L21, mitochondrial
ZA [auth T]39S ribosomal protein L22, mitochondrial
AB [auth U]39S ribosomal protein L23, mitochondrial
BB [auth V]39S ribosomal protein L24, mitochondrial
CB [auth W]39S ribosomal protein L27, mitochondrial
DB [auth X]39S ribosomal protein L28, mitochondrial
EB [auth Y]39S ribosomal protein L47, mitochondrial
FB [auth Z]39S ribosomal protein L30, mitochondrial
GB [auth 0]39S ribosomal protein L32, mitochondrial
F [auth AF]28S ribosomal protein S7, mitochondrial
HB [auth 1]39S ribosomal protein L33, mitochondrial
IB [auth 2]39S ribosomal protein L34, mitochondrial
JB [auth 3]39S ribosomal protein L35, mitochondrial
KB [auth 4]39S ribosomal protein L36, mitochondrial
LB [auth 5]39S ribosomal protein L37, mitochondrial
MB [auth 6]39S ribosomal protein L38, mitochondrial-
NB [auth 7]39S ribosomal protein L39, mitochondrial
OB [auth 8]39S ribosomal protein L40, mitochondrial
PB [auth 9]39S ribosomal protein L41, mitochondrial
QB [auth a]39S ribosomal protein L42, mitochondrial
G [auth AG]28S ribosomal protein S9, mitochondrial
RB [auth b]39S ribosomal protein L43, mitochondrial
SB [auth c]39S ribosomal protein L44, mitochondrial
TB [auth d]39S ribosomal protein L45, mitochondrial
UB [auth e]39S ribosomal protein L46, mitochondrial
VB [auth f]39S ribosomal protein L48, mitochondrial-
WB [auth g]39S ribosomal protein L49, mitochondrial
XB [auth h]39S ribosomal protein L50, mitochondrial-
YB [auth i]39S ribosomal protein L51, mitochondrial
ZB [auth j]39S ribosomal protein L52, mitochondrial
AC [auth k]39S ribosomal protein L53, mitochondrial-
H [auth AH]28S ribosomal protein S10, mitochondrial-
BC [auth l]39S ribosomal protein L54, mitochondrial
CC [auth m]39S ribosomal protein L55, mitochondrial
DC [auth o]Ribosomal protein 63, mitochondrial
EC [auth p]Peptidyl-tRNA hydrolase ICT1, mitochondrial
FC [auth q]Growth arrest and DNA damage-inducible proteins-interacting protein 1-
GC [auth r]39S ribosomal protein S18a, mitochondrial
HC [auth s]39S ribosomal protein S30, mitochondrial
39S ribosomal protein L12, mitochondrial
OC [auth z]39S ribosomal protein L1, mitochondrial
PC [auth Ay]E/E-tRNA---
I [auth AI]28S ribosomal protein S11, mitochondrial

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
K [auth AK]IPR001209Small ribosomal subunit protein uS14Family
J [auth AJ]IPR006032Small ribosomal subunit protein uS12Family
J [auth AJ]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
J [auth AJ]IPR005679Ribosomal protein uS12, bacterial-typeFamily
L [auth AL]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
L [auth AL]IPR000589Small ribosomal subunit protein uS15Family
L [auth AL]IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
M [auth AM]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
M [auth AM]IPR000307Small ribosomal subunit protein bS16Family
N [auth AN]IPR039193Small ribosomal subunit protein uS17m, metazoaFamily
N [auth AN]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
N [auth AN]IPR000266Small ribosomal subunit protein uS17Family
O [auth AO]IPR040054Small ribosomal subunit protein mS40Family
O [auth AO]IPR001648Small ribosomal subunit protein bS18Family
O [auth AO]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
P [auth AP]IPR001648Small ribosomal subunit protein bS18Family
P [auth AP]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
P [auth AP]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
Q [auth AQ]IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
Q [auth AQ]IPR001911Small ribosomal subunit protein bS21Family
R [auth AR]IPR019374Small ribosomal subunit protein mS22Family
S [auth AS]IPR023611Small ribosomal subunit protein mS23, conserved domainDomain
S [auth AS]IPR019520Small ribosomal subunit protein mS23, metazoaFamily
B [auth AB]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
B [auth AB]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
B [auth AB]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
B [auth AB]IPR001865Small ribosomal subunit protein uS2Family
T [auth AT]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
T [auth AT]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
T [auth AT]IPR040049Ribosomal subunit protein mS25/mL61, mitochondrialFamily
U [auth AU]IPR026140Small ribosomal subunit protein mS26Family
V [auth AV]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
V [auth AV]IPR002885Pentatricopeptide repeatRepeat
V [auth AV]IPR019266Small ribosomal subunit protein mS27Family
V [auth AV]IPR034913mS27/PTCD2Family
W [auth AW]IPR019375Small ribosomal subunit protein bS1mFamily
X [auth AX]IPR008092Small ribosomal subunit protein mS29, metazoan-typeFamily
X [auth AX]IPR019368Small ribosomal subunit protein mS29Family
X [auth AX]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
Y [auth AY]IPR026299Mitochondrial 28S ribosomal protein S31Family
Z [auth AZ]IPR013219Small ribosomal subunit protein mS33Family
AA [auth A0]IPR032053Small ribosomal subunit protein mS34Family
BA [auth A1]IPR039848Small ribosomal subunit protein mS35, mitochondrialFamily
BA [auth A1]IPR019349Small ribosomal subunit protein mS35, mitochondrial, conserved domainDomain
CA [auth A2]IPR010625CHCHDomain
CA [auth A2]IPR009069Cysteine alpha-hairpin motif superfamilyHomologous Superfamily
CA [auth A2]IPR033620Small ribosomal subunit protein mS37, metazoanFamily
C [auth AC]IPR026146Small ribosomal subunit protein uS3m, metazoanFamily
DA [auth A3]IPR013177Ribosomal protein mS38, C-terminalDomain
EA [auth A4]IPR037387Pentatricopeptide repeat domain-containing protein 3Family
EA [auth A4]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
EA [auth A4]IPR002885Pentatricopeptide repeatRepeat
KA [auth D]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
KA [auth D]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
KA [auth D]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
KA [auth D]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
KA [auth D]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
KA [auth D]IPR002171Large ribosomal subunit protein uL2Family
LA [auth E]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
LA [auth E]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
LA [auth E]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
LA [auth E]IPR000597Large ribosomal subunit protein uL3Family
MA [auth F]IPR013005Large ribosomal subunit protein uL4-likeFamily
MA [auth F]IPR002136Large ribosomal subunit protein uL4Family
MA [auth F]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
D [auth AD]IPR000851Small ribosomal subunit protein uS5Family
D [auth AD]IPR048584Small ribosomal subunit protein uS5m, N-terminal domainDomain
D [auth AD]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
D [auth AD]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
D [auth AD]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
D [auth AD]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
D [auth AD]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
NA [auth H]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
NA [auth H]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
NA [auth H]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
NA [auth H]IPR000244Large ribosomal subunit protein bL9Family
OA [auth I]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
OA [auth I]IPR001790Large ribosomal subunit protein uL10Family
OA [auth I]IPR047865Large ribosomal subunit protein uL10, bacterial typeFamily
PA [auth J]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
PA [auth J]IPR000911Ribosomal protein uL11Family
PA [auth J]IPR006519Large ribosomal subunit protein uL11, bacterial-typeFamily
PA [auth J]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
PA [auth J]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
PA [auth J]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
QA [auth K]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
QA [auth K]IPR005822Large ribosomal subunit protein uL13Family
QA [auth K]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
QA [auth K]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
RA [auth L]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
RA [auth L]IPR000218Large ribosomal subunit protein uL14Family
SA [auth M]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
SA [auth M]IPR021131Large ribosomal subunit protein uL15/eL18Domain
SA [auth M]IPR030878Large ribosomal subunit protein uL15Family
SA [auth M]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
TA [auth N]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
TA [auth N]IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
TA [auth N]IPR016180Large ribosomal subunit protein uL16 domainDomain
TA [auth N]IPR047873Large ribosomal subunit protein uL16Family
UA [auth O]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
UA [auth O]IPR000456Large ribosomal subunit protein bL17Family
VA [auth P]IPR005484Large ribosomal subunit protein uL18Family
VA [auth P]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
WA [auth Q]IPR001857Large ribosomal subunit protein bL19Family
WA [auth Q]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
WA [auth Q]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
E [auth AE]IPR000529Small ribosomal subunit protein bS6Family
E [auth AE]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
E [auth AE]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
XA [auth R]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
XA [auth R]IPR005813Large ribosomal subunit protein bL20Family
YA [auth S]IPR028909Large ribosomal subunit protein bL21-likeFamily
YA [auth S]IPR001787Large ribosomal subunit protein bL21Family
YA [auth S]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
ZA [auth T]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
ZA [auth T]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
ZA [auth T]IPR001063Large ribosomal subunit protein uL22Family
AB [auth U]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
AB [auth U]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
AB [auth U]IPR013025Large ribosomal subunit protein uL23-likeFamily
BB [auth V]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
BB [auth V]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
BB [auth V]IPR003256Large ribosomal subunit protein uL24Family
BB [auth V]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
BB [auth V]IPR005824KOWDomain
BB [auth V]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
CB [auth W]IPR001684Large ribosomal subunit protein bL27Family
DB [auth X]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
DB [auth X]IPR026569Large ribosomal subunit protein bL28Family
DB [auth X]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
EB [auth Y]IPR038340MRP-L47 superfamily, mitochondrialHomologous Superfamily
EB [auth Y]IPR010729Large ribosomal subunit protein uL29m, mitochondrialFamily
FB [auth Z]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
FB [auth Z]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
FB [auth Z]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
GB [auth 0]IPR002677Large ribosomal subunit protein bL32Family
GB [auth 0]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
F [auth AF]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
F [auth AF]IPR000235Small ribosomal subunit protein uS7Family
F [auth AF]IPR023798Small ribosomal subunit protein uS7 domainDomain
HB [auth 1]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
HB [auth 1]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
HB [auth 1]IPR001705Large ribosomal subunit protein bL33Family
IB [auth 2]IPR000271Large ribosomal subunit protein bL34Family
JB [auth 3]IPR021137Large ribosomal subunit protein bL35-likeFamily
JB [auth 3]IPR019338Large ribosomal subunit protein bL35mFamily
JB [auth 3]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
KB [auth 4]IPR000473Large ribosomal subunit protein bL36Family
KB [auth 4]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
LB [auth 5]IPR010793Large ribosomal subunit protein mL37/mL65Family
MB [auth 6]IPR036610PEBP-like superfamilyHomologous Superfamily
MB [auth 6]IPR008914Phosphatidylethanolamine-binding proteinFamily
MB [auth 6]IPR035810Phosphatidylethanolamine-binding protein, eukaryoticFamily
NB [auth 7]IPR012676TGS-likeHomologous Superfamily
NB [auth 7]IPR018163Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyHomologous Superfamily
NB [auth 7]IPR004095TGSDomain
NB [auth 7]IPR012675Beta-grasp domain superfamilyHomologous Superfamily
OB [auth 8]IPR019192Large ribosomal subunit protein mL40Family
OB [auth 8]IPR039145Large ribosomal subunit protein mL40, metazoa/plantsFamily
PB [auth 9]IPR019189Large ribosomal subunit protein mL41Family
QB [auth a]IPR019346Large ribosomal subunit protein mL42Family
G [auth AG]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
G [auth AG]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
G [auth AG]IPR000754Small ribosomal subunit protein uS9Family
G [auth AG]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
RB [auth b]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
RB [auth b]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
RB [auth b]IPR039927Large ribosomal subunit protein mL43Family
SB [auth c]IPR036389Ribonuclease III, endonuclease domain superfamilyHomologous Superfamily
SB [auth c]IPR044444Large ribosomal subunit protein mL44, dsRNA binding domain, metazoaDomain
SB [auth c]IPR014720Double-stranded RNA-binding domainDomain
TB [auth d]IPR032710NTF2-like domain superfamilyHomologous Superfamily
TB [auth d]IPR007379Tim44-like domainDomain
UB [auth e]IPR015797NUDIX hydrolase-like domain superfamilyHomologous Superfamily
UB [auth e]IPR021757Large ribosomal subunit protein mL46, N-terminalDomain
UB [auth e]IPR040008Large ribosomal subunit protein mL46Family
UB [auth e]IPR033650Large ribosomal subunit protein mL46, NUDIX domainDomain
VB [auth f]IPR027486Small ribosomal subunit protein uS10 domainDomain
VB [auth f]IPR027487Large ribosomal subunit protein mL48Family
VB [auth f]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
WB [auth g]IPR007740Large ribosomal subunit protein mL49Family
XB [auth h]IPR018305Large ribosomal subunit protein mL50Family
YB [auth i]IPR019373Large ribosomal subunit protein mL51Family
ZB [auth j]IPR034596Large ribosomal subunit protein mL52Family
AC [auth k]IPR019716Large ribosomal subunit protein mL53Family
H [auth AH]IPR027486Small ribosomal subunit protein uS10 domainDomain
H [auth AH]IPR040055Small ribosomal subunit protein uS10mFamily
H [auth AH]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
BC [auth l]IPR013870Large ribosomal subunit protein mL54Family
CC [auth m]IPR044884Large ribosomal subunit protein mL55 superfamilyHomologous Superfamily
CC [auth m]IPR018615Large ribosomal subunit protein mL55Family
DC [auth o]IPR016576Large ribosomal subunit protein mL63Family
EC [auth p]IPR000352Peptide chain release factor class IDomain
FC [auth q]IPR018472Large ribosomal subunit protein mL64Family
FC [auth q]IPR043035Large ribosomal subunit protein mL64 domain superfamilyHomologous Superfamily
GC [auth r]IPR001648Small ribosomal subunit protein bS18Family
GC [auth r]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
HC [auth s]IPR039982Large ribosomal subunit protein mL65Family
HC [auth s]IPR010793Large ribosomal subunit protein mL37/mL65Family
IPR013823Large ribosomal subunit protein bL12, C-terminalDomain
IPR008932Large ribosomal subunit protein bL12, oligomerizationDomain
IPR036235Large ribosomal subunit protein bL12, oligomerization domain superfamilyHomologous Superfamily
IPR014719Ribosomal protein bL12, C-terminal/adaptor protein ClpS-likeHomologous Superfamily
IPR000206Large ribosomal subunit protein bL12Family
OC [auth z]IPR005879Large ribosomal subunit protein uL1, mitochondrialFamily
OC [auth z]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
OC [auth z]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
OC [auth z]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
I [auth AI]IPR001971Small ribosomal subunit protein uS11Family
I [auth AI]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
I [auth AI]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
K [auth AK]PharosO60783
J [auth AJ]PharosO15235
L [auth AL]PharosP82914
M [auth AM]PharosQ9Y3D3
N [auth AN]PharosQ9Y2R5
O [auth AO]PharosQ9Y676
P [auth AP]PharosQ9Y3D5
R [auth AR]PharosP82650
S [auth AS]PharosQ9Y3D9
B [auth AB]PharosQ9Y399
T [auth AT]PharosP82663
V [auth AV]PharosQ92552
W [auth AW]PharosQ9Y2Q9
X [auth AX]PharosP51398
Y [auth AY]PharosQ92665
Z [auth AZ]PharosQ9Y291
AA [auth A0]PharosP82930
BA [auth A1]PharosP82673
CA [auth A2]PharosQ96BP2
DA [auth A3]PharosQ9NWT8
EA [auth A4]PharosQ96EY7
KA [auth D]PharosQ5T653
LA [auth E]PharosP09001
MA [auth F]PharosQ9BYD3
D [auth AD]PharosP82675
NA [auth H]PharosQ9BYD2
OA [auth I]PharosQ7Z7H8
PA [auth J]PharosQ9Y3B7
QA [auth K]PharosQ9BYD1
RA [auth L]PharosQ6P1L8
SA [auth M]PharosQ9P015
TA [auth N]PharosQ9NX20
UA [auth O]PharosQ9NRX2
VA [auth P]PharosQ9H0U6
WA [auth Q]PharosP49406
E [auth AE]PharosP82932
XA [auth R]PharosQ9BYC9
ZA [auth T]PharosQ9NWU5
AB [auth U]PharosQ16540
BB [auth V]PharosQ96A35
CB [auth W]PharosQ9P0M9
DB [auth X]PharosQ13084
EB [auth Y]PharosQ9HD33
FB [auth Z]PharosQ8TCC3
GB [auth 0]PharosQ9BYC8
F [auth AF]PharosQ9Y2R9
HB [auth 1]PharosO75394
IB [auth 2]PharosQ9BQ48
JB [auth 3]PharosQ9NZE8
KB [auth 4]PharosQ9P0J6
LB [auth 5]PharosQ9BZE1
NB [auth 7]PharosQ9NYK5
OB [auth 8]PharosQ9NQ50
PB [auth 9]PharosQ8IXM3
QB [auth a]PharosQ9Y6G3
G [auth AG]PharosP82933
RB [auth b]PharosQ8N983
SB [auth c]PharosQ9H9J2
TB [auth d]PharosQ9BRJ2
VB [auth f]PharosQ96GC5
WB [auth g]PharosQ13405
XB [auth h]PharosQ8N5N7
YB [auth i]PharosQ4U2R6
ZB [auth j]PharosQ86TS9
H [auth AH]PharosP82664
BC [auth l]PharosQ6P161
CC [auth m]PharosQ7Z7F7
DC [auth o]PharosQ9BQC6
EC [auth p]PharosQ14197
FC [auth q]PharosQ8TAE8
GC [auth r]PharosQ9NVS2
HC [auth s]PharosQ9NP92
PharosP52815
OC [auth z]PharosQ9BYD6
I [auth AI]PharosP82912