7QHS

S. cerevisiae CMGE nucleating origin DNA melting


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth 2]PF17207e7qhs24 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
A [auth 2]PF17855e7qhs22 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
A [auth 2]PF14551e7qhs21 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
A [auth 2]PF00493e7qhs23 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
A [auth 2]F_UNCLASSIFIEDe7qhs25 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
J [auth E]PF02724e7qhsE1 A: alpha arraysX: HhH/H2THH: Cdc45 CID domain (From Topology)T: Cdc45 CID domainF: PF02724ECOD (1.6)
J [auth E]PF02724e7qhsE3 A: a+b three layersX: C-terminal domain in DHH phosphoesterases (From Topology)H: C-terminal domain in DHH phosphoesterases (From Topology)T: C-terminal domain in DHH phosphoesterasesF: PF02724ECOD (1.6)
J [auth E]PF02724e7qhsE2 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: DHH phosphoesterasesF: PF02724ECOD (1.6)
K [auth F]F_UNCLASSIFIEDe7qhsF2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: F_UNCLASSIFIEDECOD (1.6)
K [auth F]F_UNCLASSIFIEDe7qhsF3 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
K [auth F]PF04042e7qhsF1 A: a+b four layersX: Carbon-nitrogen hydrolase-likeH: Metallo-dependent phosphatases (From Topology)T: Metallo-dependent phosphatasesF: PF04042ECOD (1.6)
O [auth 5]PF17207e7qhs52 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
O [auth 5]PF17855e7qhs51 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
O [auth 5]PF21933e7qhs53 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF21933ECOD (1.6)
O [auth 5]PF14551e7qhs54 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
O [auth 5]PF00493e7qhs56 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
O [auth 5]F_UNCLASSIFIEDe7qhs55 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
B [auth 3]PF17207e7qhs33 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
B [auth 3]PF17855e7qhs34 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
B [auth 3]PF14551e7qhs35 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
B [auth 3]PF00493e7qhs32 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
B [auth 3]F_UNCLASSIFIEDe7qhs31 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
C [auth 4]PF17207e7qhs42 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
C [auth 4]PF17855e7qhs43 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
C [auth 4]PF14551e7qhs45 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
C [auth 4]PF00493e7qhs44 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
C [auth 4]PF17207e7qhs41 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF17207ECOD (1.6)
D [auth 6]PF17207e7qhs64 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
D [auth 6]PF17855e7qhs62 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
D [auth 6]PF14551e7qhs63 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
D [auth 6]PF00493e7qhs61 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
D [auth 6]PF17207e7qhs65 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF17207ECOD (1.6)
E [auth 7]PF17207e7qhs73 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
E [auth 7]PF17855e7qhs75 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
E [auth 7]PF14551e7qhs72 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
E [auth 7]PF00493e7qhs71 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
E [auth 7]F_UNCLASSIFIEDe7qhs74 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
F [auth H]PF05916e7qhsH1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF1 N-terminal domain-likeF: PF05916ECOD (1.6)
F [auth H]F_UNCLASSIFIEDe7qhsH2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: F_UNCLASSIFIEDECOD (1.6)
G [auth I]PF05916e7qhsI1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF2 C-terminal domain-likeF: PF05916ECOD (1.6)
G [auth I]F_UNCLASSIFIEDe7qhsI2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: F_UNCLASSIFIEDECOD (1.6)
H [auth C]PF05916e7qhsC1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF2 C-terminal domain-likeF: PF05916ECOD (1.6)
H [auth C]PF22466e7qhsC2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: PF22466ECOD (1.6)
I [auth D]PF05916e7qhsD1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF1 N-terminal domain-likeF: PF05916ECOD (1.6)
I [auth D]PF16922e7qhsD2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: PF16922ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth 2]PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
A [auth 2]PF12619Mini-chromosome maintenance protein 2 (MCM2_N)Mini-chromosome maintenance protein 2- Family
A [auth 2]PF00493MCM P-loop domain (MCM)MCM P-loop domain- Domain
A [auth 2]PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins.Domain
A [auth 2]PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
J [auth E]PF02724CDC45-like protein (CDC45)CDC45-like protein- Family
K [auth F]PF04042DNA polymerase alpha/epsilon subunit B (DNA_pol_E_B)DNA polymerase alpha/epsilon subunit B- Family
O [auth 5]PF00493MCM P-loop domain (MCM)MCM P-loop domain- Domain
O [auth 5]PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins.Domain
O [auth 5]PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
B [auth 3]PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
B [auth 3]PF00493MCM P-loop domain (MCM)MCM P-loop domain- Domain
B [auth 3]PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins.Domain
B [auth 3]PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
C [auth 4]PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
C [auth 4]PF00493MCM P-loop domain (MCM)MCM P-loop domain- Domain
C [auth 4]PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins.Domain
C [auth 4]PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
D [auth 6]PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
D [auth 6]PF00493MCM P-loop domain (MCM)MCM P-loop domain- Domain
D [auth 6]PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins.Domain
D [auth 6]PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
E [auth 7]PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
E [auth 7]PF00493MCM P-loop domain (MCM)MCM P-loop domain- Domain
E [auth 7]PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins.Domain
E [auth 7]PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
F [auth H]PF05916GINS complex protein (Sld5)GINS complex protein- Family
G [auth I]PF05916GINS complex protein (Sld5)GINS complex protein- Family
H [auth C]PF05916GINS complex protein (Sld5)GINS complex protein- Family
I [auth D]PF05916GINS complex protein (Sld5)GINS complex protein- Family
I [auth D]PF16922DNA replication complex GINS protein SLD5 C-terminus (SLD5_C)DNA replication complex GINS protein SLD5 C-terminusThe C-terminal domain of DNA replication complex GINS protein SLD5 is important in the assembly of the GINS complex, a complex which is involved in initiation of DNA replication and progression of DNA replication forks [1].Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 2]DNA replication licensing factor MCM2
J [auth E]Cell division control protein 45
K [auth F]DNA polymerase epsilon subunit B
L [auth G]DNA polymerase epsilon catalytic subunit A
M [auth A]DNA (26-MER)---
N [auth B]DNA (26-MER)---
O [auth 5]DNA replication licensing factor MCM5
B [auth 3]DNA replication licensing factor MCM3
C [auth 4]DNA replication licensing factor MCM4
D [auth 6]DNA replication licensing factor MCM6
E [auth 7]DNA replication licensing factor MCM7
F [auth H]DNA replication complex GINS protein PSF1-
G [auth I]DNA replication complex GINS protein PSF2-
H [auth C]DNA replication complex GINS protein PSF3-
I [auth D]DNA replication complex GINS protein SLD5-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth 2]IPR027925MCM, N-terminal domainDomain
A [auth 2]IPR031327Mini-chromosome maintenance proteinFamily
A [auth 2]IPR018525Mini-chromosome maintenance, conserved siteConserved Site
A [auth 2]IPR033762MCM OB domainDomain
A [auth 2]IPR001208MCM domainDomain
A [auth 2]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
A [auth 2]IPR041562MCM, AAA-lid domainDomain
A [auth 2]IPR008045DNA replication licensing factor Mcm2Family
A [auth 2]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
J [auth E]IPR003874CDC45 familyFamily
K [auth F]IPR016266DNA polymerase epsilon, subunit BFamily
K [auth F]IPR007185DNA polymerase alpha/delta/epsilon, subunit BDomain
L [auth G]IPR036397Ribonuclease H superfamilyHomologous Superfamily
L [auth G]IPR006134DNA-directed DNA polymerase, family B, multifunctional domainDomain
L [auth G]IPR012337Ribonuclease H-like superfamilyHomologous Superfamily
L [auth G]IPR023211DNA polymerase, palm domain superfamilyHomologous Superfamily
L [auth G]IPR006172DNA-directed DNA polymerase, family BFamily
L [auth G]IPR029703DNA polymerase epsilon catalytic subunitFamily
L [auth G]IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
L [auth G]IPR013697DNA polymerase epsilon, catalytic subunit A, C-terminalDomain
L [auth G]IPR006133DNA-directed DNA polymerase, family B, exonuclease domainDomain
L [auth G]IPR042087DNA polymerase family B, thumb domainHomologous Superfamily
O [auth 5]IPR027925MCM, N-terminal domainDomain
O [auth 5]IPR031327Mini-chromosome maintenance proteinFamily
O [auth 5]IPR018525Mini-chromosome maintenance, conserved siteConserved Site
O [auth 5]IPR033762MCM OB domainDomain
O [auth 5]IPR008048DNA replication licensing factor Mcm5Family
O [auth 5]IPR001208MCM domainDomain
O [auth 5]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
O [auth 5]IPR041562MCM, AAA-lid domainDomain
O [auth 5]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
B [auth 3]IPR031327Mini-chromosome maintenance proteinFamily
B [auth 3]IPR018525Mini-chromosome maintenance, conserved siteConserved Site
B [auth 3]IPR003593AAA+ ATPase domainDomain
B [auth 3]IPR001208MCM domainDomain
B [auth 3]IPR041562MCM, AAA-lid domainDomain
B [auth 3]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
B [auth 3]IPR027925MCM, N-terminal domainDomain
B [auth 3]IPR008046DNA replication licensing factor Mcm3Family
B [auth 3]IPR033762MCM OB domainDomain
B [auth 3]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
C [auth 4]IPR031327Mini-chromosome maintenance proteinFamily
C [auth 4]IPR018525Mini-chromosome maintenance, conserved siteConserved Site
C [auth 4]IPR001208MCM domainDomain
C [auth 4]IPR041562MCM, AAA-lid domainDomain
C [auth 4]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
C [auth 4]IPR027925MCM, N-terminal domainDomain
C [auth 4]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
C [auth 4]IPR008047Mini-chromosome maintenance complex protein 4Family
C [auth 4]IPR033762MCM OB domainDomain
C [auth 4]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
D [auth 6]IPR008049DNA replication licensing factor Mcm6Family
D [auth 6]IPR041024Mcm6, C-terminal winged-helix domainDomain
D [auth 6]IPR031327Mini-chromosome maintenance proteinFamily
D [auth 6]IPR018525Mini-chromosome maintenance, conserved siteConserved Site
D [auth 6]IPR001208MCM domainDomain
D [auth 6]IPR041562MCM, AAA-lid domainDomain
D [auth 6]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
D [auth 6]IPR027925MCM, N-terminal domainDomain
D [auth 6]IPR033762MCM OB domainDomain
D [auth 6]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
E [auth 7]IPR031327Mini-chromosome maintenance proteinFamily
E [auth 7]IPR008050DNA replication licensing factor Mcm7Family
E [auth 7]IPR018525Mini-chromosome maintenance, conserved siteConserved Site
E [auth 7]IPR003593AAA+ ATPase domainDomain
E [auth 7]IPR001208MCM domainDomain
E [auth 7]IPR041562MCM, AAA-lid domainDomain
E [auth 7]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
E [auth 7]IPR027925MCM, N-terminal domainDomain
E [auth 7]IPR033762MCM OB domainDomain
E [auth 7]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
F [auth H]IPR021151GINS subunit, domain ADomain
F [auth H]IPR005339GINS complex, subunit Psf1Family
F [auth H]IPR036224GINS, helical bundle-like domain superfamilyHomologous Superfamily
G [auth I]IPR007257DNA replication complex GINS protein Psf2Family
G [auth I]IPR021151GINS subunit, domain ADomain
G [auth I]IPR036224GINS, helical bundle-like domain superfamilyHomologous Superfamily
H [auth C]IPR036224GINS, helical bundle-like domain superfamilyHomologous Superfamily
H [auth C]IPR021151GINS subunit, domain ADomain
H [auth C]IPR010492GINS complex, subunit Psf3Family
H [auth C]IPR038437GINS complex, subunit Psf3 superfamilyHomologous Superfamily
I [auth D]IPR008591GINS complex subunit Sld5Family
I [auth D]IPR038749GINS complex protein Sld5, alpha-helical domainDomain
I [auth D]IPR036224GINS, helical bundle-like domain superfamilyHomologous Superfamily
I [auth D]IPR021151GINS subunit, domain ADomain
I [auth D]IPR031633DNA replication complex GINS protein SLD5, C-terminalDomain