7QGU

Structure of the B. subtilis disome - stalled 70S ribosome


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
JSCOP2B SuperfamilyRibosomal protein L138106736 3001134 SCOP2B (2022-06-29)
KSCOP2B Superfamily50S Ribosomal protein L14-like8106722 3000433 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyRibosomal proteins L15p and L18e8106744 3001045 SCOP2B (2022-06-29)
MSCOP2 FamilyRibosomal protein L16p8106729 4003717 SCOP2 (2022-06-29)
MSCOP2 SuperfamilyRibosomal protein L16p/L10e8106730 3000884 SCOP2 (2022-06-29)
NSCOP2B SuperfamilyProkaryotic ribosomal protein L178106734 3000995 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyTranslational machinery components8106908 3000571 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8106764 3000334 SCOP2B (2022-06-29)
QSCOP2 FamilyRibosomal protein L208106755 4001930 SCOP2 (2022-06-29)
QSCOP2 SuperfamilyRibosomal protein L208106756 3000563 SCOP2 (2022-06-29)
RSCOP2B Superfamilyl21p-like8106766 3002005 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyRibosomal protein L228106910 3001078 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8106728 3000210 SCOP2B (2022-06-29)
USCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8106906 3000334 SCOP2B (2022-06-29)
VSCOP2 FamilyRibosomal L27 protein8106751 4001900 SCOP2 (2022-06-29)
VSCOP2 SuperfamilyRibosomal L27 protein-like8106752 3000539 SCOP2 (2022-06-29)
X [auth Y]SCOP2 FamilyRibosomal protein L288106759 4003961 SCOP2 (2022-06-29)
X [auth Y]SCOP2 SuperfamilyL28p-like8106760 3001966 SCOP2 (2022-06-29)
Y [auth Z]SCOP2B SuperfamilyRibosomal protein L29 (L29p)8106920 3000713 SCOP2B (2022-06-29)
Z [auth a]SCOP2 FamilyRibosomal protein L30p/L7e8106913 4001360 SCOP2 (2022-06-29)
Z [auth a]SCOP2 SuperfamilyRibosomal protein L30p/L7e8106914 3001378 SCOP2 (2022-06-29)
AA [auth b]SCOP2B SuperfamilyZn-binding ribosomal proteins8106808 3001320 SCOP2B (2022-06-29)
BA [auth c]SCOP2 FamilyRibosomal protein L33p8106805 4000511 SCOP2 (2022-06-29)
BA [auth c]SCOP2 SuperfamilyZn-binding ribosomal proteins8106806 3001320 SCOP2 (2022-06-29)
DA [auth e]SCOP2B SuperfamilyL35p-like8106758 3000790 SCOP2B (2022-06-29)
EA [auth f]SCOP2 FamilyRibosomal protein L368106783 4003715 SCOP2 (2022-06-29)
EA [auth f]SCOP2 SuperfamilyRibosomal protein L368106784 3001346 SCOP2 (2022-06-29)
GA [auth g]SCOP2 FamilyRibosomal protein S2-like8106753 4003744 SCOP2 (2022-06-29)
GA [auth g]SCOP2 SuperfamilySIS domain/Ribosomal protein S2-like8106754 3001397 SCOP2 (2022-06-29)
IA [auth i]SCOP2B SuperfamilyAlpha-L RNA-binding motif8106750 3001473 SCOP2B (2022-06-29)
KA [auth k]SCOP2 FamilyRibosomal protein S68106747 4001337 SCOP2 (2022-06-29)
KA [auth k]SCOP2 SuperfamilyRibosomal protein S68106748 3001323 SCOP2 (2022-06-29)
LA [auth l]SCOP2B SuperfamilyRibosomal protein S78106718 3000799 SCOP2B (2022-06-29)
MA [auth m]SCOP2B SuperfamilyRibosomal protein S88106742 3000709 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyTranslational proteins8106720 3000811 SCOP2B (2022-06-29)
NA [auth n]SCOP2 FamilyTranslational machinery components8106745 4000951 SCOP2 (2022-06-29)
NA [auth n]SCOP2 SuperfamilyRibosomal protein S5 domain 2-like8106746 3000100 SCOP2 (2022-06-29)
OA [auth o]SCOP2B SuperfamilyRibosomal protein S108106918 3001336 SCOP2B (2022-06-29)
PA [auth p]SCOP2B SuperfamilyTranslational machinery components8106878 3000571 SCOP2B (2022-06-29)
QA [auth q]SCOP2B SuperfamilyNucleic acid-binding proteins8106738 3000135 SCOP2B (2022-06-29)
RA [auth r]SCOP2 FamilyRibosomal protein S138106723 4000260 SCOP2 (2022-06-29)
RA [auth r]SCOP2 SuperfamilyS13-like H2TH domain8106724 3000053 SCOP2 (2022-06-29)
SA [auth s]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8106916 3000068 SCOP2B (2022-06-29)
TA [auth t]SCOP2 Family30S Ribosomal protein S15 / 40S Ribosomal protein S138106791 4000767 SCOP2 (2022-06-29)
TA [auth t]SCOP2 SuperfamilyS15/NS1 RNA-binding domain8106792 3001284 SCOP2 (2022-06-29)
UA [auth u]SCOP2B SuperfamilyRibosomal protein S168106762 3000680 SCOP2B (2022-06-29)
VA [auth v]SCOP2 FamilyCold shock DNA-binding domain-like8106739 4001909 SCOP2 (2022-06-29)
VA [auth v]SCOP2 SuperfamilyNucleic acid-binding proteins8106740 3000135 SCOP2 (2022-06-29)
ESCOP2 FamilyRibosomal protein L48106725 4003628 SCOP2 (2022-06-29)
ESCOP2 SuperfamilyRibosomal protein L48106726 3001146 SCOP2 (2022-06-29)
XA [auth x]SCOP2B SuperfamilyRibosomal protein S198106912 3000686 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyRL5-like8106732 3001709 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
JPF00572e7qguJ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
KPF00238e7qguK1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
LPF00828e7qguL1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
MPF00252e7qguM1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
NPF01196e7qguN1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: PF01196ECOD (1.6)
OPF00861e7qguO1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00861ECOD (1.6)
PPF01245e7qguP1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01245ECOD (1.6)
QPF00453e7qguQ1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: PF00453ECOD (1.6)
RPF00829e7qguR1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: PF00829ECOD (1.6)
SPF00237e7qguS1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
TPF00276e7qguT1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276ECOD (1.6)
UPF00467,PF17136e7qguU1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF17136ECOD (1.6)
VPF01016e7qguV1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: PF01016ECOD (1.6)
W [auth X]PF01281e7qguX1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: PF01281ECOD (1.6)
W [auth X]PF03948e7qguX2 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: PF03948ECOD (1.6)
X [auth Y]PF00830e7qguY1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: PF00830ECOD (1.6)
Y [auth Z]PF00831e7qguZ1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
Z [auth a]PF00327e7qgua1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327ECOD (1.6)
AA [auth b]PF01783e7qgub1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01783ECOD (1.6)
BA [auth c]PF00471e7qguc1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00471ECOD (1.6)
CA [auth d]PF00468e7qgud1 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: PF00468ECOD (1.6)
CPF00181e7qguC1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
CPF03947e7qguC2 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
DA [auth e]PF01632e7qgue1 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: PF01632ECOD (1.6)
EA [auth f]PF00444e7qguf1 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: PF00444ECOD (1.6)
GA [auth g]PF00318e7qgug1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
HA [auth h]PF00189e7qguh2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: PF00189ECOD (1.6)
HA [auth h]PF07650e7qguh1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF07650ECOD (1.6)
IA [auth i]PF00163,PF01479e7qgui1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00163,PF01479ECOD (1.6)
JA [auth j]PF03719e7qguj2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
JA [auth j]PF00333e7qguj1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
KA [auth k]PF01250e7qguk1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: PF01250ECOD (1.6)
LA [auth l]PF00177e7qgul1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
MA [auth m]PF00410e7qgum2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: PF00410ECOD (1.6)
MA [auth m]PF00410e7qgum1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: PF00410ECOD (1.6)
DPF00297e7qguD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
NA [auth n]PF00380e7qgun1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
OA [auth o]PF00338e7qguo1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
PA [auth p]PF00411e7qgup1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
QA [auth q]PF00164e7qguq1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
RA [auth r]PF00416e7qgur1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: PF00416ECOD (1.6)
SA [auth s]PF00253e7qgus1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
TA [auth t]PF00312e7qgut1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
UA [auth u]PF00886e7qguu1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: PF00886ECOD (1.6)
VA [auth v]PF00366e7qguv1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366ECOD (1.6)
WA [auth w]PF01084e7qguw1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF01084ECOD (1.6)
EPF00573e7qguE1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
XA [auth x]PF00203e7qgux1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: PF00203ECOD (1.6)
YA [auth y]PF01649e7qguy1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: PF01649ECOD (1.6)
BB [auth 3]PF01197e7qgu31 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: PF01197ECOD (1.6)
FPF00281,PF00673e7qguF1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
GPF00347e7qguG2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
HPF00466e7qguH1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: PF00466ECOD (1.6)
IPF00298e7qguI1 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: PF00298ECOD (1.6)
IPF03946e7qguI2 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: PF03946ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
PF00467KOW motif (KOW)KOW motif- Family
PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
W [auth X]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
W [auth X]PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domain- Domain
X [auth Y]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
Y [auth Z]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
Z [auth a]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
AA [auth b]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
BA [auth c]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
CA [auth d]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
DA [auth e]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
EA [auth f]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36- Domain
GA [auth g]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
HA [auth h]PF07650KH domain (KH_2)KH domain- Domain
HA [auth h]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
IA [auth i]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
IA [auth i]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
JA [auth j]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
JA [auth j]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
KA [auth k]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
LA [auth l]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
MA [auth m]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
NA [auth n]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
OA [auth o]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
PA [auth p]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
QA [auth q]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
RA [auth r]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
SA [auth s]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
TA [auth t]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
UA [auth u]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
VA [auth v]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
WA [auth w]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
XA [auth x]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
YA [auth y]PF01649Ribosomal protein S20 (Ribosomal_S20p)Ribosomal protein S20- Family
BB [auth 3]PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
23S rRNA---
50S ribosomal protein L13
50S ribosomal protein L14
50S ribosomal protein L15
50S ribosomal protein L16
50S ribosomal protein L17
50S ribosomal protein L18
50S ribosomal protein L19
50S ribosomal protein L20
50S ribosomal protein L21
50S ribosomal protein L22
5S rRNA---
50S ribosomal protein L23
50S ribosomal protein L24
50S ribosomal protein L27
W [auth X]50S ribosomal protein L9
X [auth Y]50S ribosomal protein L28
Y [auth Z]50S ribosomal protein L29
Z [auth a]50S ribosomal protein L30
AA [auth b]50S ribosomal protein L32
BA [auth c]50S ribosomal protein L33
CA [auth d]50S ribosomal protein L34
50S ribosomal protein L2
DA [auth e]50S ribosomal protein L35
EA [auth f]50S ribosomal protein L36
FA [auth W]16S rRNA---
GA [auth g]30S ribosomal protein S2
HA [auth h]30S ribosomal protein S3
IA [auth i]30S ribosomal protein S4
JA [auth j]30S ribosomal protein S5
KA [auth k]30S ribosomal protein S6
LA [auth l]30S ribosomal protein S7
MA [auth m]30S ribosomal protein S8
50S ribosomal protein L3
NA [auth n]30S ribosomal protein S9
OA [auth o]30S ribosomal protein S10
PA [auth p]30S ribosomal protein S11
QA [auth q]30S ribosomal protein S12
RA [auth r]30S ribosomal protein S13
SA [auth s]30S ribosomal protein S14 type Z
TA [auth t]30S ribosomal protein S15
UA [auth u]30S ribosomal protein S16
VA [auth v]30S ribosomal protein S17
WA [auth w]30S ribosomal protein S18
50S ribosomal protein L4
XA [auth x]30S ribosomal protein S19
YA [auth y]30S ribosomal protein S20
ZA [auth z]P-site tRNA---
AB [auth 2]YqzJ- -
BB [auth 3]50S ribosomal protein L31
50S ribosomal protein L5
Ribosomal protein L6---
50S ribosomal protein L10
50S ribosomal protein L11

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
IPR005822Large ribosomal subunit protein uL13Family
IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
IPR000218Large ribosomal subunit protein uL14Family
IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
IPR021131Large ribosomal subunit protein uL15/eL18Domain
IPR030878Large ribosomal subunit protein uL15Family
IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
IPR016180Large ribosomal subunit protein uL16 domainDomain
IPR047873Large ribosomal subunit protein uL16Family
IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
IPR000456Large ribosomal subunit protein bL17Family
IPR005484Large ribosomal subunit protein uL18Family
IPR004389Large ribosomal subunit protein uL18, bacterial-typeFamily
IPR001857Large ribosomal subunit protein bL19Family
IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
IPR005813Large ribosomal subunit protein bL20Family
IPR028909Large ribosomal subunit protein bL21-likeFamily
IPR001787Large ribosomal subunit protein bL21Family
IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
IPR001063Large ribosomal subunit protein uL22Family
IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
IPR013025Large ribosomal subunit protein uL23-likeFamily
IPR003256Large ribosomal subunit protein uL24Family
IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IPR005824KOWDomain
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
IPR001684Large ribosomal subunit protein bL27Family
IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
W [auth X]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
W [auth X]IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
W [auth X]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
W [auth X]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
W [auth X]IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
W [auth X]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
W [auth X]IPR000244Large ribosomal subunit protein bL9Family
X [auth Y]IPR001383Large ribosomal subunit protein bL28, bacterial-typeFamily
X [auth Y]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
X [auth Y]IPR026569Large ribosomal subunit protein bL28Family
X [auth Y]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
Y [auth Z]IPR001854Large ribosomal subunit protein uL29Family
Y [auth Z]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
Y [auth Z]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
Z [auth a]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
Z [auth a]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
Z [auth a]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
Z [auth a]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
AA [auth b]IPR002677Large ribosomal subunit protein bL32Family
AA [auth b]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AA [auth b]IPR044957Large ribosomal subunit protein bL32, bacterial typeFamily
BA [auth c]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
BA [auth c]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
BA [auth c]IPR001705Large ribosomal subunit protein bL33Family
BA [auth c]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
CA [auth d]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
CA [auth d]IPR000271Large ribosomal subunit protein bL34Family
IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
IPR002171Large ribosomal subunit protein uL2Family
DA [auth e]IPR021137Large ribosomal subunit protein bL35-likeFamily
DA [auth e]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
DA [auth e]IPR001706Large ribosomal subunit protein bL35Family
DA [auth e]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
EA [auth f]IPR000473Large ribosomal subunit protein bL36Family
EA [auth f]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
GA [auth g]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
GA [auth g]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
GA [auth g]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
GA [auth g]IPR001865Small ribosomal subunit protein uS2Family
HA [auth h]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
HA [auth h]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
HA [auth h]IPR004087K Homology domainDomain
HA [auth h]IPR004044K Homology domain, type 2Domain
HA [auth h]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
HA [auth h]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
HA [auth h]IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
HA [auth h]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
IA [auth i]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
IA [auth i]IPR002942RNA-binding S4 domainDomain
IA [auth i]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
IA [auth i]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
IA [auth i]IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
IA [auth i]IPR022801Small ribosomal subunit protein uS4Family
JA [auth j]IPR000851Small ribosomal subunit protein uS5Family
JA [auth j]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
JA [auth j]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
JA [auth j]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
JA [auth j]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
JA [auth j]IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
JA [auth j]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
KA [auth k]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
KA [auth k]IPR000529Small ribosomal subunit protein bS6Family
KA [auth k]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
KA [auth k]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
KA [auth k]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
LA [auth l]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
LA [auth l]IPR000235Small ribosomal subunit protein uS7Family
LA [auth l]IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
LA [auth l]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
LA [auth l]IPR023798Small ribosomal subunit protein uS7 domainDomain
MA [auth m]IPR000630Small ribosomal subunit protein uS8Family
MA [auth m]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
MA [auth m]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
IPR000597Large ribosomal subunit protein uL3Family
NA [auth n]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
NA [auth n]IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
NA [auth n]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
NA [auth n]IPR000754Small ribosomal subunit protein uS9Family
NA [auth n]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
OA [auth o]IPR001848Small ribosomal subunit protein uS10Family
OA [auth o]IPR027486Small ribosomal subunit protein uS10 domainDomain
OA [auth o]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
OA [auth o]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
PA [auth p]IPR001971Small ribosomal subunit protein uS11Family
PA [auth p]IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
PA [auth p]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
PA [auth p]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
QA [auth q]IPR006032Small ribosomal subunit protein uS12Family
QA [auth q]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
QA [auth q]IPR005679Ribosomal protein uS12, bacterial-typeFamily
RA [auth r]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
RA [auth r]IPR001892Small ribosomal subunit protein uS13Family
RA [auth r]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
RA [auth r]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
RA [auth r]IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
SA [auth s]IPR023053Small ribosomal subunit protein uS14, bacteriaFamily
SA [auth s]IPR001209Small ribosomal subunit protein uS14Family
SA [auth s]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
SA [auth s]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
TA [auth t]IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
TA [auth t]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
TA [auth t]IPR000589Small ribosomal subunit protein uS15Family
UA [auth u]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
UA [auth u]IPR000307Small ribosomal subunit protein bS16Family
UA [auth u]IPR020592Small ribosomal subunit protein bS16, conserved siteConserved Site
VA [auth v]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
VA [auth v]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
VA [auth v]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
VA [auth v]IPR000266Small ribosomal subunit protein uS17Family
WA [auth w]IPR001648Small ribosomal subunit protein bS18Family
WA [auth w]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
WA [auth w]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
IPR013005Large ribosomal subunit protein uL4-likeFamily
IPR002136Large ribosomal subunit protein uL4Family
IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
XA [auth x]IPR002222Small ribosomal subunit protein uS19Family
XA [auth x]IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
XA [auth x]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
XA [auth x]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
YA [auth y]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
YA [auth y]IPR002583Small ribosomal subunit protein bS20Family
BB [auth 3]IPR002150Large ribosomal subunit protein bL31 type A/BFamily
BB [auth 3]IPR027491Large ribosomal subunit protein bL31 type AFamily
BB [auth 3]IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
BB [auth 3]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
IPR002132Large ribosomal subunit protein uL5Family
IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
IPR001790Large ribosomal subunit protein uL10Family
IPR047865Large ribosomal subunit protein uL10, bacterial typeFamily
IPR022973Large ribosomal subunit protein uL10, bacterialFamily
IPR002363Large ribosomal subunit protein uL10, conserved site, bacteriaConserved Site
IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
IPR000911Ribosomal protein uL11Family
IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
IPR006519Large ribosomal subunit protein uL11, bacterial-typeFamily
IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily