7QGH

Structure of the E. coli disome - collided 70S ribosome


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
D [auth R]SCOP2B SuperfamilyRibosomal protein L48096356 3001146 SCOP2B (2022-06-29)
E [auth S]SCOP2B SuperfamilyRL5-like8096352 3001709 SCOP2B (2022-06-29)
F [auth T]SCOP2B SuperfamilyRibosomal protein L68035397 3000724 SCOP2B (2022-06-29)
F [auth T]SCOP2B SuperfamilyRibosomal protein L68035398 3000724 SCOP2B (2022-06-29)
H [auth W]SCOP2B SuperfamilyRibosomal protein L138096350 3001134 SCOP2B (2022-06-29)
J [auth Y]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8070553 3001045 SCOP2B (2022-06-29)
L [auth a]SCOP2B SuperfamilyProkaryotic ribosomal protein L178035409 3000995 SCOP2B (2022-06-29)
M [auth b]SCOP2B SuperfamilyTranslational machinery components8032969 3000571 SCOP2B (2022-06-29)
N [auth c]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8096364 3000334 SCOP2B (2022-06-29)
O [auth d]SCOP2B SuperfamilyRibosomal protein L208096382 3000563 SCOP2B (2022-06-29)
P [auth e]SCOP2B Superfamilyl21p-like8096354 3002005 SCOP2B (2022-06-29)
Q [auth f]SCOP2B SuperfamilyRibosomal protein L228096336 3001078 SCOP2B (2022-06-29)
R [auth g]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8035415 3000210 SCOP2B (2022-06-29)
S [auth h]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8096358 3000334 SCOP2B (2022-06-29)
T [auth i]SCOP2B SuperfamilyRibosomal protein L25-like8042538 3001161 SCOP2B (2022-06-29)
U [auth j]SCOP2B SuperfamilyRibosomal L27 protein-like8096338 3000539 SCOP2B (2022-06-29)
V [auth k]SCOP2B SuperfamilyL28p-like8035424 3001966 SCOP2B (2022-06-29)
W [auth l]SCOP2B SuperfamilyRibosomal protein L29 (L29p)8096370 3000713 SCOP2B (2022-06-29)
Y [auth n]SCOP2B SuperfamilyZn-binding ribosomal proteins8096380 3001320 SCOP2B (2022-06-29)
Z [auth o]SCOP2B SuperfamilyZn-binding ribosomal proteins8096362 3001320 SCOP2B (2022-06-29)
MA [auth 3]SCOP2B SuperfamilyAlpha-L RNA-binding motif8083400 3001473 SCOP2B (2022-06-29)
OA [auth 5]SCOP2B SuperfamilyRibosomal protein S68066495 3001323 SCOP2B (2022-06-29)
PA [auth 6]SCOP2B SuperfamilyRibosomal protein S78077979 3000799 SCOP2B (2022-06-29)
QA [auth 7]SCOP2B SuperfamilyRibosomal protein S88079059 3000709 SCOP2B (2022-06-29)
RA [auth 8]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8082661 3000100 SCOP2B (2022-06-29)
TA [auth A]SCOP2B SuperfamilyTranslational machinery components8035368 3000571 SCOP2B (2022-06-29)
UA [auth B]SCOP2B SuperfamilyNucleic acid-binding proteins8106545 3000135 SCOP2B (2022-06-29)
VA [auth D]SCOP2B SuperfamilyS13-like H2TH domain8098358 3000053 SCOP2B (2022-06-29)
WA [auth E]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052568 3000068 SCOP2B (2022-06-29)
XA [auth F]SCOP2B SuperfamilyS15/NS1 RNA-binding domain8032375 3001284 SCOP2B (2022-06-29)
ZA [auth H]SCOP2B SuperfamilyNucleic acid-binding proteins8059276 3000135 SCOP2B (2022-06-29)
X [auth m]SCOP2B SuperfamilyRibosomal protein L30p/L7e8096372 3001378 SCOP2B (2022-06-29)
C [auth Q]SCOP2B SuperfamilyTranslational proteins8032955 3000811 SCOP2B (2022-06-29)
GA [auth U]SCOP2B SuperfamilyL9 N-domain-like8032960 3000338 SCOP2B (2022-06-29)
GA [auth U]SCOP2B SuperfamilyRibosomal protein L9 C-domain8032958 3000329 SCOP2B (2022-06-29)
G [auth V]SCOP2B SuperfamilyRibosomal protein L11 C-terminal domain8032961 3001186 SCOP2B (2022-06-29)
G [auth V]SCOP2B SuperfamilyRibosomal L11/L12e N-terminal domain-like8032963 3000950 SCOP2B (2022-06-29)
I [auth X]SCOP2B Superfamily50S Ribosomal protein L14-like8103358 3000433 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth P]PF00181e7qghP1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
B [auth P]PF03947e7qghP2 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
D [auth R]PF00573e7qghR1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
E [auth S]PF00281,PF00673e7qghS1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
F [auth T]PF00347e7qghT2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
H [auth W]PF00572e7qghW1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
J [auth Y]PF00828e7qghY1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
K [auth Z]PF00252e7qghZ1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
L [auth a]PF01196e7qgha1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: PF01196ECOD (1.6)
M [auth b]PF00861e7qghb1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00861ECOD (1.6)
N [auth c]PF01245e7qghc1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01245ECOD (1.6)
O [auth d]PF00453e7qghd1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: PF00453ECOD (1.6)
P [auth e]PF00829e7qghe1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: PF00829ECOD (1.6)
Q [auth f]PF00237e7qghf1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
R [auth g]PF00276e7qghg1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276ECOD (1.6)
S [auth h]PF00467,PF17136e7qghh1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF17136ECOD (1.6)
T [auth i]PF01386e7qghi1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: PF01386ECOD (1.6)
U [auth j]PF01016e7qghj1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: PF01016ECOD (1.6)
V [auth k]PF00830e7qghk1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: PF00830ECOD (1.6)
W [auth l]PF00831e7qghl1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
Y [auth n]PF01783e7qghn1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01783ECOD (1.6)
Z [auth o]PF00471e7qgho1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00471ECOD (1.6)
AA [auth p]PF00468e7qghp1 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: PF00468ECOD (1.6)
BA [auth q]PF01632e7qghq1 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: PF01632ECOD (1.6)
FA [auth C]PF00687e7qghC1 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: PF00687ECOD (1.6)
LA [auth 2]PF00189e7qgh21 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: PF00189ECOD (1.6)
LA [auth 2]PF07650e7qgh22 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF07650ECOD (1.6)
MA [auth 3]PF00163,PF01479e7qgh31 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00163,PF01479ECOD (1.6)
OA [auth 5]PF01250e7qgh51 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: PF01250ECOD (1.6)
PA [auth 6]PF00177e7qgh61 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
QA [auth 7]PF00410e7qgh72 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: PF00410ECOD (1.6)
QA [auth 7]PF00410e7qgh71 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: PF00410ECOD (1.6)
RA [auth 8]PF00380e7qgh81 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
SA [auth 9]PF00338e7qgh91 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
TA [auth A]PF00411e7qghA1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
UA [auth B]PF00164e7qghB1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
VA [auth D]PF00416e7qghD1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: PF00416ECOD (1.6)
WA [auth E]PF00253e7qghE1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
XA [auth F]PF00312e7qghF1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
YA [auth G]PF00886e7qghG1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: PF00886ECOD (1.6)
ZA [auth H]PF00366e7qghH1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366ECOD (1.6)
AB [auth I]PF01084e7qghI1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF01084ECOD (1.6)
BB [auth J]PF00203e7qghJ1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: PF00203ECOD (1.6)
CB [auth K]PF01649e7qghK1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: PF01649ECOD (1.6)
EB [auth t]PF00575e7qght2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00575ECOD (1.6)
X [auth m]PF00327e7qghm1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327ECOD (1.6)
CA [auth r]PF00444e7qghr1 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: PF00444ECOD (1.6)
C [auth Q]PF00297e7qghQ1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
EA [auth L]PF01197e7qghL1 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: PF01197ECOD (1.6)
GA [auth U]PF01281e7qghU1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: PF01281ECOD (1.6)
GA [auth U]PF03948e7qghU2 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: PF03948ECOD (1.6)
KA [auth 1]PF00318e7qgh11 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
NA [auth 4]PF03719e7qgh41 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
NA [auth 4]PF00333e7qgh42 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
DB [auth s]PF01165e7qghs1 A: extended segmentsX: 30S ribosomal protein S21 (From Topology)H: 30S ribosomal protein S21 (From Topology)T: 30S ribosomal protein S21F: PF01165ECOD (1.6)
G [auth V]PF00298e7qghV2 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: PF00298ECOD (1.6)
G [auth V]PF03946e7qghV1 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: PF03946ECOD (1.6)
I [auth X]PF00238e7qghX1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
D [auth R]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
E [auth S]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
E [auth S]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
F [auth T]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
H [auth W]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
J [auth Y]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
L [auth a]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
M [auth b]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
N [auth c]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
O [auth d]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
P [auth e]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
Q [auth f]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
R [auth g]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
S [auth h]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
S [auth h]PF00467KOW motif (KOW)KOW motif- Family
T [auth i]PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.Domain
U [auth j]PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
V [auth k]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
W [auth l]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
Y [auth n]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
Z [auth o]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
FA [auth C]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10.Domain
MA [auth 3]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
MA [auth 3]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
OA [auth 5]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
PA [auth 6]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
QA [auth 7]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
RA [auth 8]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
TA [auth A]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
UA [auth B]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
VA [auth D]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
WA [auth E]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
XA [auth F]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
ZA [auth H]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
AB [auth I]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
CB [auth K]PF01649Ribosomal protein S20 (Ribosomal_S20p)Ribosomal protein S20- Family
EB [auth t]PF00575S1 RNA binding domain (S1)S1 RNA binding domainThe S1 domain occurs in a wide range of RNA associated proteins. It is structurally similar to cold shock protein which binds nucleic acids. The S1 domain has an OB-fold structure.Domain
X [auth m]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
C [auth Q]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
EA [auth L]PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
GA [auth U]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
GA [auth U]PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domain- Domain
NA [auth 4]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
NA [auth 4]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
G [auth V]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
G [auth V]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
I [auth X]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth O]5S rRNA---
B [auth P]50S ribosomal protein L2---
D [auth R]50S ribosomal protein L4
E [auth S]50S ribosomal protein L5
F [auth T]50S ribosomal protein L6
H [auth W]50S ribosomal protein L13
J [auth Y]50S ribosomal protein L15
K [auth Z]50S ribosomal protein L16---
L [auth a]50S ribosomal protein L17
M [auth b]50S ribosomal protein L18
N [auth c]50S ribosomal protein L19
O [auth d]50S ribosomal protein L20
P [auth e]50S ribosomal protein L21
Q [auth f]50S ribosomal protein L22
R [auth g]50S ribosomal protein L23
S [auth h]50S ribosomal protein L24
T [auth i]50S ribosomal protein L25
U [auth j]50S ribosomal protein L27
V [auth k]50S ribosomal protein L28
W [auth l]50S ribosomal protein L29
Y [auth n]50S ribosomal protein L32
Z [auth o]50S ribosomal protein L33
AA [auth p]50S ribosomal protein L34---
BA [auth q]50S ribosomal protein L35---
FA [auth C]50S ribosomal protein L1
HA [auth M]P-site tRNA---
JA [auth 0]16S rRNA---
LA [auth 2]30S ribosomal protein S3---
MA [auth 3]30S ribosomal protein S4
OA [auth 5]30S ribosomal protein S6, non-modified isoform
PA [auth 6]30S ribosomal protein S7
QA [auth 7]30S ribosomal protein S8
RA [auth 8]30S ribosomal protein S9
SA [auth 9]30S ribosomal protein S10---
TA [auth A]30S ribosomal protein S11
UA [auth B]30S ribosomal protein S12
VA [auth D]30S ribosomal protein S13
WA [auth E]30S ribosomal protein S14
XA [auth F]30S ribosomal protein S15
YA [auth G]30S ribosomal protein S16---
ZA [auth H]30S ribosomal protein S17
AB [auth I]30S ribosomal protein S18
BB [auth J]30S ribosomal protein S19---
CB [auth K]30S ribosomal protein S20
EB [auth t]30S ribosomal protein S1
FB [auth u]A-site tRNA---
X [auth m]50S ribosomal protein L30
CA [auth r]50S ribosomal protein L36---
C [auth Q]50S ribosomal protein L3
DA [auth N]23S rRNA---
EA [auth L]50S ribosomal protein L31
GA [auth U]50S ribosomal protein L9
IA [auth x]mRNA---
KA [auth 1]30S ribosomal protein S2---
NA [auth 4]30S ribosomal protein S5
DB [auth s]30S ribosomal protein S21---
G [auth V]50S ribosomal protein L11
I [auth X]50S ribosomal protein L14

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
D [auth R]IPR013005Large ribosomal subunit protein uL4-likeFamily
D [auth R]IPR002136Large ribosomal subunit protein uL4Family
D [auth R]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
E [auth S]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
E [auth S]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
E [auth S]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
E [auth S]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
E [auth S]IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
E [auth S]IPR002132Large ribosomal subunit protein uL5Family
F [auth T]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
F [auth T]IPR019906Large ribosomal subunit protein uL6, bacterial-typeFamily
F [auth T]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
F [auth T]IPR000702Large ribosomal subunit protein uL6-likeFamily
F [auth T]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
H [auth W]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
H [auth W]IPR005822Large ribosomal subunit protein uL13Family
H [auth W]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
H [auth W]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
J [auth Y]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
J [auth Y]IPR021131Large ribosomal subunit protein uL15/eL18Domain
J [auth Y]IPR030878Large ribosomal subunit protein uL15Family
J [auth Y]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
J [auth Y]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
L [auth a]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
L [auth a]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
L [auth a]IPR000456Large ribosomal subunit protein bL17Family
M [auth b]IPR005484Large ribosomal subunit protein uL18Family
M [auth b]IPR004389Large ribosomal subunit protein uL18, bacterial-typeFamily
N [auth c]IPR001857Large ribosomal subunit protein bL19Family
N [auth c]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
N [auth c]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
N [auth c]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
O [auth d]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
O [auth d]IPR005813Large ribosomal subunit protein bL20Family
P [auth e]IPR028909Large ribosomal subunit protein bL21-likeFamily
P [auth e]IPR001787Large ribosomal subunit protein bL21Family
P [auth e]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
P [auth e]IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
Q [auth f]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
Q [auth f]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
Q [auth f]IPR001063Large ribosomal subunit protein uL22Family
Q [auth f]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
Q [auth f]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
R [auth g]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
R [auth g]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
R [auth g]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
R [auth g]IPR013025Large ribosomal subunit protein uL23-likeFamily
S [auth h]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
S [auth h]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
S [auth h]IPR003256Large ribosomal subunit protein uL24Family
S [auth h]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
S [auth h]IPR005824KOWDomain
S [auth h]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
T [auth i]IPR020055Ribosomal protein bL25, short-formFamily
T [auth i]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
T [auth i]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
T [auth i]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
U [auth j]IPR001684Large ribosomal subunit protein bL27Family
U [auth j]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
V [auth k]IPR001383Large ribosomal subunit protein bL28, bacterial-typeFamily
V [auth k]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
V [auth k]IPR026569Large ribosomal subunit protein bL28Family
V [auth k]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
W [auth l]IPR001854Large ribosomal subunit protein uL29Family
W [auth l]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
W [auth l]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
Y [auth n]IPR002677Large ribosomal subunit protein bL32Family
Y [auth n]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
Y [auth n]IPR044957Large ribosomal subunit protein bL32, bacterial typeFamily
Z [auth o]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
Z [auth o]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
Z [auth o]IPR001705Large ribosomal subunit protein bL33Family
Z [auth o]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
FA [auth C]IPR005878Large ribosomal subunit protein uL1, bacterial-typeFamily
FA [auth C]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
FA [auth C]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
FA [auth C]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
FA [auth C]IPR002143Large ribosomal subunit protein uL1Family
FA [auth C]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
MA [auth 3]IPR002942RNA-binding S4 domainDomain
MA [auth 3]IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
MA [auth 3]IPR022801Small ribosomal subunit protein uS4Family
MA [auth 3]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
MA [auth 3]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
MA [auth 3]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
OA [auth 5]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
OA [auth 5]IPR000529Small ribosomal subunit protein bS6Family
OA [auth 5]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
OA [auth 5]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
OA [auth 5]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
PA [auth 6]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
PA [auth 6]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
PA [auth 6]IPR000235Small ribosomal subunit protein uS7Family
PA [auth 6]IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
PA [auth 6]IPR023798Small ribosomal subunit protein uS7 domainDomain
QA [auth 7]IPR000630Small ribosomal subunit protein uS8Family
QA [auth 7]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
QA [auth 7]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
RA [auth 8]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
RA [auth 8]IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
RA [auth 8]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
RA [auth 8]IPR000754Small ribosomal subunit protein uS9Family
RA [auth 8]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
TA [auth A]IPR001971Small ribosomal subunit protein uS11Family
TA [auth A]IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
TA [auth A]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
TA [auth A]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
UA [auth B]IPR005679Ribosomal protein uS12, bacterial-typeFamily
UA [auth B]IPR006032Small ribosomal subunit protein uS12Family
UA [auth B]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
VA [auth D]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
VA [auth D]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
VA [auth D]IPR001892Small ribosomal subunit protein uS13Family
VA [auth D]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
VA [auth D]IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
WA [auth E]IPR001209Small ribosomal subunit protein uS14Family
WA [auth E]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
WA [auth E]IPR023036Small ribosomal subunit protein uS14, bacteria/plastidFamily
XA [auth F]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
XA [auth F]IPR000589Small ribosomal subunit protein uS15Family
XA [auth F]IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
ZA [auth H]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
ZA [auth H]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
ZA [auth H]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
ZA [auth H]IPR000266Small ribosomal subunit protein uS17Family
AB [auth I]IPR001648Small ribosomal subunit protein bS18Family
AB [auth I]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
AB [auth I]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
CB [auth K]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
CB [auth K]IPR002583Small ribosomal subunit protein bS20Family
EB [auth t]IPR035104Ribosomal protein S1-likeFamily
EB [auth t]IPR003029S1 domainDomain
EB [auth t]IPR000110Small ribosomal subunit protein bS1Family
EB [auth t]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
X [auth m]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
X [auth m]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
X [auth m]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
X [auth m]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
C [auth Q]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
C [auth Q]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
C [auth Q]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
C [auth Q]IPR000597Large ribosomal subunit protein uL3Family
EA [auth L]IPR002150Large ribosomal subunit protein bL31 type A/BFamily
EA [auth L]IPR027491Large ribosomal subunit protein bL31 type AFamily
EA [auth L]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
EA [auth L]IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
GA [auth U]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
GA [auth U]IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
GA [auth U]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
GA [auth U]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
GA [auth U]IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
GA [auth U]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
GA [auth U]IPR000244Large ribosomal subunit protein bL9Family
NA [auth 4]IPR000851Small ribosomal subunit protein uS5Family
NA [auth 4]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
NA [auth 4]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
NA [auth 4]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
NA [auth 4]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
NA [auth 4]IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
NA [auth 4]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
G [auth V]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
G [auth V]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
G [auth V]IPR000911Ribosomal protein uL11Family
G [auth V]IPR006519Large ribosomal subunit protein uL11, bacterial-typeFamily
G [auth V]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
G [auth V]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
G [auth V]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
I [auth X]IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
I [auth X]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
I [auth X]IPR000218Large ribosomal subunit protein uL14Family
I [auth X]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site