7Q8S | pdb_00007q8s

Leishmania major ADP-actin filament decorated with Leishmania major cofilin

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
J	SCOP2B Superfamily	Actin depolymerizing proteins	8107566	3000430	SCOP2B (2022-06-29)
H [auth I]	SCOP2 Family	Cofilin-like	8107565	4001833	SCOP2 (2022-06-29)
H [auth I]	SCOP2 Superfamily	Actin depolymerizing proteins	8107566	3000430	SCOP2 (2022-06-29)
F [auth H]	SCOP2B Superfamily	Actin depolymerizing proteins	8107566	3000430	SCOP2B (2022-06-29)
D [auth G]	SCOP2B Superfamily	Actin depolymerizing proteins	8107566	3000430	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Actin depolymerizing proteins	8107566	3000430	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
J	tRNA-synt_2d	e7q8sJ1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: tRNA-synt_2d	ECOD (develop294)
H [auth I]	tRNA-synt_2d	e7q8sI1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: tRNA-synt_2d	ECOD (develop294)
F [auth H]	tRNA-synt_2d	e7q8sH1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: tRNA-synt_2d	ECOD (develop294)
D [auth G]	tRNA-synt_2d	e7q8sG1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: tRNA-synt_2d	ECOD (develop294)
B	tRNA-synt_2d	e7q8sB1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: tRNA-synt_2d	ECOD (develop294)
I [auth F]	tRNA-synt_2d	e7q8sF1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: tRNA-synt_2d	ECOD (develop294)
G [auth E]	tRNA-synt_2d	e7q8sE1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: tRNA-synt_2d	ECOD (develop294)
E [auth D]	tRNA-synt_2d	e7q8sD1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: tRNA-synt_2d	ECOD (develop294)
C	tRNA-synt_2d	e7q8sC1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: tRNA-synt_2d	ECOD (develop294)
A	tRNA-synt_2d	e7q8sA1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: tRNA-synt_2d	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
I [auth F]	3.90.640.10	Alpha Beta	Alpha-Beta Complex	Actin	Chain A, domain 4	CATH (utative)
G [auth E]	3.90.640.10	Alpha Beta	Alpha-Beta Complex	Actin	Chain A, domain 4	CATH (utative)
E [auth D]	3.90.640.10	Alpha Beta	Alpha-Beta Complex	Actin	Chain A, domain 4	CATH (utative)
C	3.90.640.10	Alpha Beta	Alpha-Beta Complex	Actin	Chain A, domain 4	CATH (utative)
A	3.90.640.10	Alpha Beta	Alpha-Beta Complex	Actin	Chain A, domain 4	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B, D [auth G], F [auth H], H [auth I], J	PF00241	Cofilin/tropomyosin-type actin-binding protein (Cofilin_ADF)	Cofilin/tropomyosin-type actin-binding protein	Severs actin filaments and binds to actin monomers.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B, D [auth G], F [auth H], H [auth I], J	ADF/Cofilin	cytoskeletal protein binding actin binding protein-containing complex binding protein binding binding actin filament binding	cellular component disassembly actin polymerization or depolymerization actin cytoskeleton organization protein-containing complex organization actin filament organization protein-containing complex disassembly actin filament depolymerization cellular component organization organelle organization actin filament-based process cellular process cellular component organization or biogenesis supramolecular fiber organization protein depolymerization cellular component disassembly actin polymerization or depolymerization actin cytoskeleton organization protein-containing complex organization actin filament organization protein-containing complex disassembly actin filament depolymerization cellular component organization organelle organization actin filament-based process cellular process cellular component organization or biogenesis supramolecular fiber organization protein depolymerization cytoskeleton organization localization cellular localization transport establishment of localization in cell intracellular transport establishment of localization cell division	membrane-bounded organelle cell projection cellular anatomical structure intracellular anatomical structure ciliary plasm organelle cilium cytoplasm plasma membrane bounded cell projection intracellular organelle cytoskeleton membraneless organelle intracellular membraneless organelle actin cytoskeleton membrane-bounded organelle cell projection cellular anatomical structure intracellular anatomical structure ciliary plasm organelle cilium cytoplasm plasma membrane bounded cell projection intracellular organelle cytoskeleton membraneless organelle intracellular membraneless organelle actin cytoskeleton nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen organelle lumen nuclear lumen
A, C, E [auth D], G [auth E], I [auth F]	Actin	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding hydrolase activity catalytic activity	-	intracellular organelle cellular anatomical structure intracellular anatomical structure cytoskeleton organelle membraneless organelle intracellular membraneless organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B, D [auth G], F [auth H], H [auth I], J	IPR029006	ADF-H/Gelsolin-like domain superfamily	Homologous Superfamily
B, D [auth G], F [auth H], H [auth I], J	IPR002108	Actin-depolymerising factor homology domain	Domain
B, D [auth G], F [auth H], H [auth I], J	IPR017904	ADF/Cofilin	Family
A, C, E [auth D], G [auth E], I [auth F]	IPR020902	Actin/actin-like conserved site	Conserved Site
A, C, E [auth D], G [auth E], I [auth F]	IPR004001	Actin, conserved site	Conserved Site
A, C, E [auth D], G [auth E], I [auth F]	IPR043129	ATPase, nucleotide binding domain	Homologous Superfamily
A, C, E [auth D], G [auth E], I [auth F]	IPR004000	Actin family	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.