7Q3L
Human 17S U2 snRNP 5' domain
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth C] | SCOP2B Superfamily | WD40 repeat-like | 8052534 | 3001694 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2B Superfamily | WD40 repeat-like | 8051197 | 3001694 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2B Superfamily | WD40 repeat-like | 8052534 | 3001694 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2B Superfamily | WD40 repeat-like | 8052535 | 3001694 | SCOP2B (2022-06-29) |
D [auth G] | SCOP2B Superfamily | Triquetra zinc finger motif | 8051848 | 3002040 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth C] | PF03178,PF10433 | e7q3lC2 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF03178,PF10433 | ECOD (1.6) |
B [auth C] | PF10433 | e7q3lC4 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF10433 | ECOD (1.6) |
B [auth C] | PF03178 | e7q3lC3 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF03178 | ECOD (1.6) |
C [auth E] | PF07189 | e7q3lE1 | A: alpha arrays | X: RDS3 complex subunit 10 (From Topology) | H: RDS3 complex subunit 10 (From Topology) | T: RDS3 complex subunit 10 | F: PF07189 | ECOD (1.6) |
D [auth G] | PF03660 | e7q3lG1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: PHD finger-like domain-containing protein 5A | F: PF03660 | ECOD (1.6) |
G [auth q] | F_UNCLASSIFIED | e7q3lq1 | A: a+b two layers | X: Alpha-beta plaits | H: RNA-binding domain, RBD (From Topology) | T: RNA-binding domain, RBD | F: F_UNCLASSIFIED | ECOD (1.6) |
H [auth A] | PF22646 | e7q3lA1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF22646 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B] | PF04037 | Domain of unknown function (DUF382) (DUF382) | Domain of unknown function (DUF382) | - | Family |
B [auth C] | PF10433 | Mono-functional DNA-alkylating methyl methanesulfonate N-term (MMS1_N) | Mono-functional DNA-alkylating methyl methanesulfonate N-term | - | Repeat |
B [auth C] | PF03178 | CPSF A subunit region (CPSF_A) | CPSF A subunit region | - | Repeat |
C [auth E] | PF07189 | Splicing factor 3B subunit 10 (SF3b10) (SF3b10) | Splicing factor 3B subunit 10 (SF3b10) | - | Family |
D [auth G] | PF03660 | PHF5-like protein (PHF5) | PHF5-like protein | - | Family |
F [auth 9] | PF11931 | SF3a60/Prp9 C-terminal (SF3a60_Prp9_C) | SF3a60/Prp9 C-terminal | - | Family |
G [auth q] | PF00076 | RNA recognition motif (RRM_1) | RNA recognition motif | The RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and pro ... | Domain |