7POO

Crystal structure of profragilysin-3 (proBFT-3) from Bacteroides fragilis in complex with foliosidine in P212121.


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF16376e7pooA2 A: a+b two layersX: Fragilysin-3 prodomain-likeH: Fragilysin-3 prodomain (From Topology)T: Fragilysin-3 prodomainF: PF16376ECOD (1.6)
APF13688e7pooA1 A: mixed a+b and a/bX: Zincin-likeH: Metalloproteases (zincins) catalytic domain (From Topology)T: Metalloproteases (zincins) catalytic domainF: PF13688ECOD (1.6)
BPF16376e7pooB1 A: a+b two layersX: Fragilysin-3 prodomain-likeH: Fragilysin-3 prodomain (From Topology)T: Fragilysin-3 prodomainF: PF16376ECOD (1.6)
BPF13688e7pooB2 A: mixed a+b and a/bX: Zincin-likeH: Metalloproteases (zincins) catalytic domain (From Topology)T: Metalloproteases (zincins) catalytic domainF: PF13688ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF16376N-terminal domain of fragilysin (fragilysinNterm)N-terminal domain of fragilysinN-terminal domain of fragilysin, an extracellular metalloprotease toxin, which is primary virulence factor of B. fragilis, an oportunistic pathogen of human gut. The N-terminal domain of fragilysin inhibits fragilysin and is cleaved ...N-terminal domain of fragilysin, an extracellular metalloprotease toxin, which is primary virulence factor of B. fragilis, an oportunistic pathogen of human gut. The N-terminal domain of fragilysin inhibits fragilysin and is cleaved in a mature, virulent form.
Domain
A, B
PF13583Metallo-peptidase family M12B Reprolysin-like (Reprolysin_4)Metallo-peptidase family M12B Reprolysin-likeThis zinc-binding metallo-peptidase has the characteristic binding motif HExxGHxxGxxH of Reprolysin-like peptidases of family M12B.Domain