7PNK

Unstacked compact Dunaliella PSII


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00124e7pnkA1 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: PF00124ECOD (1.6)
Y [auth a]PF00124e7pnka1 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: PF00124ECOD (1.6)
Z [auth b]PF00421e7pnkb1 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PF00421ECOD (1.6)
Z [auth b]PF00421e7pnkb2 A: a+b two layersX: Photosystem II antenna protein PsbB insertion domain (From Topology)H: Photosystem II antenna protein PsbB insertion domain (From Topology)T: Photosystem II antenna protein PsbB insertion domainF: PF00421ECOD (1.6)
BPF00421e7pnkB2 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PF00421ECOD (1.6)
BPF00421e7pnkB1 A: a+b two layersX: Photosystem II antenna protein PsbB insertion domain (From Topology)H: Photosystem II antenna protein PsbB insertion domain (From Topology)T: Photosystem II antenna protein PsbB insertion domainF: PF00421ECOD (1.6)
C [auth V]PF05969e7pnkV1 A: extended segmentsX: Photosystem II reaction center protein ycf12 (From Topology)H: Photosystem II reaction center protein ycf12 (From Topology)T: Photosystem II reaction center protein ycf12F: PF05969ECOD (1.6)
AA [auth v]PF05969e7pnkv1 A: extended segmentsX: Photosystem II reaction center protein ycf12 (From Topology)H: Photosystem II reaction center protein ycf12 (From Topology)T: Photosystem II reaction center protein ycf12F: PF05969ECOD (1.6)
BA [auth c]PF00421e7pnkc1 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PF00421ECOD (1.6)
D [auth C]PF00421e7pnkC1 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PF00421ECOD (1.6)
E [auth D]PF00124e7pnkD1 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: PF00124ECOD (1.6)
CA [auth d]PF00124e7pnkd1 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: PF00124ECOD (1.6)
F [auth E]PF00283,PF00284e7pnkE1 A: extended segmentsX: Cytochrome b559 subunits (From Topology)H: Cytochrome b559 subunits (From Topology)T: Cytochrome b559 subunitsF: PF00283,PF00284ECOD (1.6)
DA [auth e]PF00283,PF00284e7pnke1 A: extended segmentsX: Cytochrome b559 subunits (From Topology)H: Cytochrome b559 subunits (From Topology)T: Cytochrome b559 subunitsF: PF00283,PF00284ECOD (1.6)
FA [auth h]PF00737e7pnkh1 A: extended segmentsX: Photosystem II 10 kDa phosphoprotein PsbH (From Topology)H: Photosystem II 10 kDa phosphoprotein PsbH (From Topology)T: Photosystem II 10 kDa phosphoprotein PsbHF: PF00737ECOD (1.6)
HPF00737e7pnkH1 A: extended segmentsX: Photosystem II 10 kDa phosphoprotein PsbH (From Topology)H: Photosystem II 10 kDa phosphoprotein PsbH (From Topology)T: Photosystem II 10 kDa phosphoprotein PsbHF: PF00737ECOD (1.6)
GA [auth i]PF02532e7pnki1 A: extended segmentsX: Photosystem II reaction center protein I, PsbI (From Topology)H: Photosystem II reaction center protein I, PsbI (From Topology)T: Photosystem II reaction center protein I, PsbIF: PF02532ECOD (1.6)
IPF02532e7pnkI1 A: extended segmentsX: Photosystem II reaction center protein I, PsbI (From Topology)H: Photosystem II reaction center protein I, PsbI (From Topology)T: Photosystem II reaction center protein I, PsbIF: PF02532ECOD (1.6)
HA [auth j]PF01788e7pnkj1 A: extended segmentsX: Photosystem II reaction center protein J, PsbJ (From Topology)H: Photosystem II reaction center protein J, PsbJ (From Topology)T: Photosystem II reaction center protein J, PsbJF: PF01788ECOD (1.6)
JPF01788e7pnkJ1 A: extended segmentsX: Photosystem II reaction center protein J, PsbJ (From Topology)H: Photosystem II reaction center protein J, PsbJ (From Topology)T: Photosystem II reaction center protein J, PsbJF: PF01788ECOD (1.6)
IA [auth k]PF02533e7pnkk1 A: extended segmentsX: Photosystem II reaction center protein K, PsbK (From Topology)H: Photosystem II reaction center protein K, PsbK (From Topology)T: Photosystem II reaction center protein K, PsbKF: PF02533ECOD (1.6)
KPF02533e7pnkK1 A: extended segmentsX: Photosystem II reaction center protein K, PsbK (From Topology)H: Photosystem II reaction center protein K, PsbK (From Topology)T: Photosystem II reaction center protein K, PsbKF: PF02533ECOD (1.6)
JA [auth l]PF02419e7pnkl1 A: extended segmentsX: Photosystem II reaction center protein L, PsbL (From Topology)H: Photosystem II reaction center protein L, PsbL (From Topology)T: Photosystem II reaction center protein L, PsbLF: PF02419ECOD (1.6)
LPF02419e7pnkL1 A: extended segmentsX: Photosystem II reaction center protein L, PsbL (From Topology)H: Photosystem II reaction center protein L, PsbL (From Topology)T: Photosystem II reaction center protein L, PsbLF: PF02419ECOD (1.6)
LA [auth o]PF01716e7pnko1 A: beta barrelsX: Outer membrane meander beta-barrelsH: OMPA-like (From Topology)T: OMPA-likeF: PF01716ECOD (1.6)
N [auth O]PF01716e7pnkO1 A: beta barrelsX: Outer membrane meander beta-barrelsH: OMPA-like (From Topology)T: OMPA-likeF: PF01716ECOD (1.6)
MA [auth p]PF01789e7pnkp1 A: a+b three layersX: Mog1p/PsbP-likeH: Mog1p/PsbP-like (From Topology)T: Mog1p/PsbP-likeF: PF01789ECOD (1.6)
O [auth P]PF01789e7pnkP1 A: a+b three layersX: Mog1p/PsbP-likeH: Mog1p/PsbP-like (From Topology)T: Mog1p/PsbP-likeF: PF01789ECOD (1.6)
OA [auth w]PF07123e7pnkw1 A: extended segmentsX: Photosystem II reaction center W protein, chloroplastic (From Topology)H: Photosystem II reaction center W protein, chloroplastic (From Topology)T: Photosystem II reaction center W protein, chloroplasticF: PF07123ECOD (1.6)
Q [auth W]PF07123e7pnkW1 A: extended segmentsX: Photosystem II reaction center W protein, chloroplastic (From Topology)H: Photosystem II reaction center W protein, chloroplastic (From Topology)T: Photosystem II reaction center W protein, chloroplasticF: PF07123ECOD (1.6)
PA [auth x]PF06596e7pnkx1 A: extended segmentsX: Photosystem II PsbX protein (From Topology)H: Photosystem II PsbX protein (From Topology)T: Photosystem II PsbX proteinF: PF06596ECOD (1.6)
R [auth X]PF06596e7pnkX1 A: extended segmentsX: Photosystem II PsbX protein (From Topology)H: Photosystem II PsbX protein (From Topology)T: Photosystem II PsbX proteinF: PF06596ECOD (1.6)
QA [auth z]PF01737e7pnkz1 A: extended segmentsX: PsbZ-like (From Topology)H: PsbZ-like (From Topology)T: PsbZ-likeF: PF01737ECOD (1.6)
S [auth Z]PF01737e7pnkZ1 A: extended segmentsX: PsbZ-like (From Topology)H: PsbZ-like (From Topology)T: PsbZ-likeF: PF01737ECOD (1.6)
U [auth G]PF00504e7pnkG1 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
V [auth S]PF00504e7pnkS1 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
W [auth Y]PF00504e7pnkY1 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
MPF05151e7pnkM1 A: extended segmentsX: Photosystem II reaction center protein M, PsbM (From Topology)H: Photosystem II reaction center protein M, PsbM (From Topology)T: Photosystem II reaction center protein M, PsbMF: PF05151ECOD (1.6)
KA [auth m]PF05151e7pnkm1 A: extended segmentsX: Photosystem II reaction center protein M, PsbM (From Topology)H: Photosystem II reaction center protein M, PsbM (From Topology)T: Photosystem II reaction center protein M, PsbMF: PF05151ECOD (1.6)
NA [auth t]PF01405e7pnkt1 A: extended segmentsX: Photosystem II reaction center protein T, PsbT (From Topology)H: Photosystem II reaction center protein T, PsbT (From Topology)T: Photosystem II reaction center protein T, PsbTF: PF01405ECOD (1.6)
P [auth T]PF01405e7pnkT1 A: extended segmentsX: Photosystem II reaction center protein T, PsbT (From Topology)H: Photosystem II reaction center protein T, PsbT (From Topology)T: Photosystem II reaction center protein T, PsbTF: PF01405ECOD (1.6)
T [auth N]PF00504e7pnkN1 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
G [auth F]PF00283e7pnkF1 A: extended segmentsX: Cytochrome b559 subunits (From Topology)H: Cytochrome b559 subunits (From Topology)T: Cytochrome b559 subunitsF: PF00283ECOD (1.6)
EA [auth f]PF00283e7pnkf1 A: extended segmentsX: Cytochrome b559 subunits (From Topology)H: Cytochrome b559 subunits (From Topology)T: Cytochrome b559 subunitsF: PF00283ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
Y [auth a]
PF00124Photosynthetic reaction centre protein (Photo_RC)Photosynthetic reaction centre protein- Family
B,
Z [auth b]
PF00421Photosystem II protein (PSII)Photosystem II protein- Family
AA [auth v],
C [auth V]
PF05969Photosystem II complex subunit Ycf12 (PSII_Ycf12)Photosystem II complex subunit Ycf12- Family
BA [auth c],
D [auth C]
PF00421Photosystem II protein (PSII)Photosystem II protein- Family
CA [auth d],
E [auth D]
PF00124Photosynthetic reaction centre protein (Photo_RC)Photosynthetic reaction centre protein- Family
DA [auth e],
F [auth E]
PF00283Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits (Cytochrom_B559)Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits- Family
DA [auth e],
F [auth E]
PF00284Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit (Cytochrom_B559a)Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit- Family
FA [auth h],
H
PF00737Photosystem II 10 kDa phosphoprotein (PsbH)Photosystem II 10 kDa phosphoprotein- Family
GA [auth i],
I
PF02532Photosystem II reaction centre I protein (PSII 4.8 kDa protein) (PsbI)Photosystem II reaction centre I protein (PSII 4.8 kDa protein)- Family
HA [auth j],
J
PF01788PsbJ (PsbJ)PsbJ- Family
IA [auth k],
K
PF02533Photosystem II 4 kDa reaction centre component (PsbK)Photosystem II 4 kDa reaction centre component- Family
JA [auth l],
L
PF02419PsbL protein (PsbL)PsbL protein- Family
QA [auth z],
S [auth Z]
PF01737YCF9 (Ycf9)YCF9- Family
U [auth G]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
KA [auth m],
M
PF05151Photosystem II reaction centre M protein (PsbM) (PsbM)Photosystem II reaction centre M protein (PsbM)- Family
NA [auth t],
P [auth T]
PF01405Photosystem II reaction centre T protein (PsbT)Photosystem II reaction centre T protein- Family
EA [auth f],
G [auth F]
PF00283Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits (Cytochrom_B559)Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
Y [auth a]
Photosystem II protein D1
B,
Z [auth b]
Photosystem II CP47 reaction center protein
AA [auth v],
C [auth V]
Photosystem II reaction center protein Ycf12-
BA [auth c],
D [auth C]
Photosystem II CP43 reaction center protein
CA [auth d],
E [auth D]
Photosystem II D2 protein
DA [auth e],
F [auth E]
Cytochrome b559 subunit alpha
FA [auth h],
H
Photosystem II reaction center protein H
GA [auth i],
I
Photosystem II reaction center protein I-
HA [auth j],
J
Photosystem II reaction center protein J-
IA [auth k],
K
Photosystem II reaction center protein K-
JA [auth l],
L
Photosystem II reaction center protein L-
LA [auth o],
N [auth O]
PsbO---
MA [auth p],
O [auth P]
PsbP---
OA [auth w],
Q [auth W]
PsbW---
PA [auth x],
R [auth X]
PsbX---
QA [auth z],
S [auth Z]
Photosystem II reaction center protein Z-
U [auth G]Chlorophyll a-b binding protein, chloroplastic
V [auth S]CP26---
W [auth Y]LHCII M1---
KA [auth m],
M
Photosystem II reaction center protein M-
NA [auth t],
P [auth T]
Photosystem II reaction center protein T-
T [auth N]Chlorophyll a-b binding protein of LHCII type I, chloroplastic---
RA [auth u],
X [auth U]
PsbU---
EA [auth f],
G [auth F]
Cytochrome b559 subunit beta

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
Y [auth a]
IPR005867Photosystem II protein D1Family
A,
Y [auth a]
IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
A,
Y [auth a]
IPR000484Photosynthetic reaction centre, L/MFamily
B,
Z [auth b]
IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
B,
Z [auth b]
IPR000932Photosystem antenna protein-likeFamily
B,
Z [auth b]
IPR017486Photosystem II CP47 reaction centre proteinFamily
AA [auth v],
C [auth V]
IPR010284Photosystem II reaction center protein Ycf12Family
BA [auth c],
D [auth C]
IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
BA [auth c],
D [auth C]
IPR000932Photosystem antenna protein-likeFamily
BA [auth c],
D [auth C]
IPR005869Photosystem II CP43 reaction centre proteinFamily
BA [auth c],
D [auth C]
IPR044900Photosystem II CP43 reaction centre protein superfamilyHomologous Superfamily
CA [auth d],
E [auth D]
IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
CA [auth d],
E [auth D]
IPR000484Photosynthetic reaction centre, L/MFamily
CA [auth d],
E [auth D]
IPR005868Photosystem II D2 proteinFamily
DA [auth e],
F [auth E]
IPR013081Photosystem II cytochrome b559, N-terminalDomain
DA [auth e],
F [auth E]
IPR006217Photosystem II cytochrome b559, alpha subunitFamily
DA [auth e],
F [auth E]
IPR013082Photosystem II cytochrome b559, alpha subunit, lumenal regionDomain
DA [auth e],
F [auth E]
IPR037025Photosystem II cytochrome b559, alpha subunit superfamilyHomologous Superfamily
DA [auth e],
F [auth E]
IPR006216Photosystem II cytochrome b559, conserved siteConserved Site
FA [auth h],
H
IPR036863Photosystem II reaction centre protein H superfamilyHomologous Superfamily
FA [auth h],
H
IPR001056Photosystem II reaction centre protein HFamily
GA [auth i],
I
IPR037271Photosystem II PsbI superfamilyHomologous Superfamily
GA [auth i],
I
IPR003686Photosystem II PsbIFamily
HA [auth j],
J
IPR002682Photosystem II PsbJFamily
HA [auth j],
J
IPR037267Photosystem II PsbJ superfamilyHomologous Superfamily
IA [auth k],
K
IPR037270Photosystem II PsbK superfamilyHomologous Superfamily
IA [auth k],
K
IPR003687Photosystem II PsbKFamily
JA [auth l],
L
IPR003372Photosystem II PsbLFamily
JA [auth l],
L
IPR037266Photosystem II PsbL superfamilyHomologous Superfamily
QA [auth z],
S [auth Z]
IPR036512Photosystem II PsbZ superfamilyHomologous Superfamily
QA [auth z],
S [auth Z]
IPR002644Photosystem II PsbZ, reaction centreFamily
U [auth G]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
U [auth G]IPR022796Chlorophyll A-B binding proteinFamily
KA [auth m],
M
IPR007826Photosystem II PsbMFamily
KA [auth m],
M
IPR037269Photosystem II PsbM superfamilyHomologous Superfamily
NA [auth t],
P [auth T]
IPR001743Photosystem II PsbTFamily
NA [auth t],
P [auth T]
IPR037268Photosystem II PsbT superfamilyHomologous Superfamily
EA [auth f],
G [auth F]
IPR006241Photosystem II cytochrome b559, beta subunitFamily
EA [auth f],
G [auth F]
IPR013081Photosystem II cytochrome b559, N-terminalDomain
EA [auth f],
G [auth F]
IPR006216Photosystem II cytochrome b559, conserved siteConserved Site

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
B,
Z [auth b]
CSD Parent Component: CYS

RESIDAA0262

PSI-MOD :  L-cysteine sulfinic acid MOD:00267