7PKT | pdb_00007pkt

Large subunit of the Chlamydomonas reinhardtii mitoribosome

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
F [auth i]	SCOP2 Family	Ribosomal protein L13	8107769	4003623	SCOP2 (2022-06-29)
F [auth i]	SCOP2 Superfamily	Ribosomal protein L13	8107770	3001134	SCOP2 (2022-06-29)
W [auth z]	SCOP2 Family	Ribosomal protein L33p	8107771	4000511	SCOP2 (2022-06-29)
W [auth z]	SCOP2 Superfamily	Zn-binding ribosomal proteins	8107772	3001320	SCOP2 (2022-06-29)
L [auth o]	SCOP2 Family	Ribosomal protein L20	8107767	4001930	SCOP2 (2022-06-29)
L [auth o]	SCOP2 Superfamily	Ribosomal protein L20	8107768	3000563	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
I [auth l]	Ribosomal_L16	e7pktl1	A: a+b complex topology	X: alpha/beta-Hammerhead/Barrel-sandwich hybrid	H: alpha/beta-Hammerhead/Barrel-sandwich hybrid	T: Ribosomal protein L10e	F: Ribosomal_L16	ECOD (1.6)
H [auth k]	Ribosomal_L27A	e7pktk1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal proteins L15p and L18e (From Topology)	T: Ribosomal proteins L15p and L18e	F: Ribosomal_L27A	ECOD (1.6)
G [auth j]	Ribosomal_L14	e7pktj1	A: beta barrels	X: Ribosomal protein L14-like	H: Ribosomal protein L14-related (From Topology)	T: Ribosomal protein L14-related	F: Ribosomal_L14	ECOD (1.6)
F [auth i]	Ribosomal_L13	e7pkti1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal protein L13 and L16-A (From Topology)	T: Ribosomal protein L13 and L16-A	F: Ribosomal_L13	ECOD (1.6)
E [auth f]	Ribosomal_L9_N_1	e7pktf1	A: a+b two layers	X: L9 N-domain-like	H: L9 N-domain-like (From Topology)	T: L9 N-domain-like	F: Ribosomal_L9_N_1	ECOD (1.6)
D [auth d]	F_UNCLASSIFIED	e7pktd1	A: a+b two layers	X: Ribosomal protein L5 (From Topology)	H: Ribosomal protein L5 (From Topology)	T: Ribosomal protein L5	F: F_UNCLASSIFIED	ECOD (1.6)
DA [auth G]	MRP-L46	e7pktG1	A: a+b two layers	X: beta-Grasp	H: Nudix (From Topology)	T: Nudix	F: MRP-L46	ECOD (1.6)
CA [auth F]	L51_S25_CI-B8	e7pktF1	A: a+b three layers	X: Thioredoxin-like	H: Thioredoxin-like (From Topology)	T: Thioredoxin-like	F: L51_S25_CI-B8	ECOD (1.6)
AA [auth D]	F_UNCLASSIFIED	e7pktD1	A: extended segments	X: Mitochondrial 54S ribosomal protein L28 (From Topology)	H: Mitochondrial 54S ribosomal protein L28 (From Topology)	T: Mitochondrial 54S ribosomal protein L28	F: F_UNCLASSIFIED	ECOD (1.6)
Z [auth e]	Ribosomal_L6	e7pkte2	A: a+b two layers	X: Ribosomal protein L6 (From Topology)	H: Ribosomal protein L6 (From Topology)	T: Ribosomal protein L6	F: Ribosomal_L6	ECOD (1.6)
Z [auth e]	Ribosomal_L6_1	e7pkte1	A: a+b two layers	X: Ribosomal protein L6 (From Topology)	H: Ribosomal protein L6 (From Topology)	T: Ribosomal protein L6	F: Ribosomal_L6_1	ECOD (1.6)
X [auth A]	Ribosomal_L34	e7pktA1	A: extended segments	X: 50S ribosomal protein L34 (From Topology)	H: 50S ribosomal protein L34 (From Topology)	T: 50S ribosomal protein L34	F: Ribosomal_L34	ECOD (1.6)
W [auth z]	Ribosomal_L33	e7pktz1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_L33	ECOD (1.6)
T [auth w]	MRP-L47	e7pktw1	A: alpha bundles	X: Long alpha-hairpin	H: Ribosomal protein L29 (L29p) (From Topology)	T: Ribosomal protein L29 (L29p)	F: MRP-L47	ECOD (1.6)
B [auth b]	Ribosomal_L3	e7pktb1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: Ribosomal_L3	ECOD (1.6)
S [auth v]	Ribosomal_L28_1	e7pktv1	A: few secondary structure elements	X: Ribosomal protein bL28-related (From Homology)	H: Ribosomal protein bL28-related	T: Ribosomal protein L28	F: Ribosomal_L28_1	ECOD (1.6)
Q [auth t]	Ribosomal_L25p	e7pktt1	A: beta barrels	X: Ribosomal protein L25-like	H: Ribosomal protein L25-like (From Topology)	T: Ribosomal protein L25-like	F: Ribosomal_L25p	ECOD (1.6)
Q [auth t]	Ribosomal_TL5_C	e7pktt2	A: a+b complex topology	X: Ribosomal protein TL5/L25 C-terminal domain-like	H: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)	T: Ribosomal protein TL5/L25 C-terminal domain-related	F: Ribosomal_TL5_C	ECOD (1.6)
L [auth o]	Ribosomal_L20	e7pkto1	A: alpha arrays	X: PABP domain-like	H: Ribosomal protein L20 (From Topology)	T: Ribosomal protein L20	F: Ribosomal_L20	ECOD (1.6)
A [auth a]	Ribosomal_L2_1	e7pkta1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_L2_1	ECOD (1.6)
A [auth a]	Ribosomal_L2_C	e7pkta2	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L2_C	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
SA [auth Z]	PF00471	Ribosomal protein L33 (Ribosomal_L33)	Ribosomal protein L33	-	Family
RA [auth Y]	PF01783	Ribosomal L32p protein family (Ribosomal_L32p)	Ribosomal L32p protein family	-	Family
QA [auth X]	PF00327	Ribosomal protein L30p/L7e (Ribosomal_L30)	Ribosomal protein L30p/L7e	This family includes prokaryotic L30 and eukaryotic L7.	Domain
PA [auth S]	PF17136	Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24)	Large ribosomal subunit protein uL24, C-terminal domain	This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ...	This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 makes very minor contributions to the biogenesis structure, and function of 60s ribosomal subunits [1]. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly [2]. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage [3].	Domain
PA [auth S]	PF00467	KOW motif (KOW)	KOW motif	-	Family
NA [auth Q]	PF00237	Ribosomal protein L22p/L17e (Ribosomal_L22)	Ribosomal protein L22p/L17e	This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.	Domain
MA [auth P]	PF00829	Ribosomal prokaryotic L21 protein (Ribosomal_L21p)	Ribosomal prokaryotic L21 protein	-	Family
LA [auth O]	PF00453	Ribosomal protein L20 (Ribosomal_L20)	Ribosomal protein L20	-	Family
KA [auth N]	PF01245	Ribosomal protein L19 (Ribosomal_L19)	Ribosomal protein L19	-	Family
JA [auth M]	PF01196	Ribosomal protein L17 (Ribosomal_L17)	Ribosomal protein L17	-	Family
HA [auth L]	PF00252	Ribosomal protein L16p/L10e (Ribosomal_L16)	Ribosomal protein L16p/L10e		Domain
GA [auth K]	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A	This family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins.	Domain
FA [auth J]	PF00238	Ribosomal protein L14p/L23e (Ribosomal_L14)	Ribosomal protein L14p/L23e		Domain
EA [auth I]	PF00572	Ribosomal protein L13 (Ribosomal_L13)	Ribosomal protein L13	-	Family
CA [auth F]	PF01281	Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)	Ribosomal protein L9, N-terminal domain		Domain
BA [auth E]	PF00347	Ribosomal protein L6 (Ribosomal_L6)	Ribosomal protein L6		Domain
X [auth A]	PF00468	Ribosomal protein L34 (Ribosomal_L34)	Ribosomal protein L34	-	Family
X [auth A]	PF03947	Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)	Ribosomal Proteins L2, C-terminal domain		Domain
X [auth A]	PF00181	Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)	Ribosomal Proteins L2, RNA binding N-terminal domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
I [auth l]	Ribosomal_L16 domain-containing protein	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
H [auth k]	Ribosomal_L18e/L15P domain-containing protein	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
G [auth j]	uL14m	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
F [auth i]	Mitochondrial ribosomal protein L13	RNA binding binding nucleic acid binding mRNA binding structural molecule activity structural constituent of ribosome	regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process regulation of translation negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
BB [auth 8]	L8 rRNA	-	-	-
AB [auth 7]	L7 rRNA	-	-	-
ZA [auth 6]	L6 rRNA	-	-	-
YA [auth 5]	L5 rRNA	-	-	-
XA [auth 4]	L4 rRNA	-	-	-
E [auth f]	50S ribosomal protein L9, chloroplastic	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex ribonucleoprotein complex membraneless organelle intracellular membraneless organelle ribosome
WA [auth 3]	L3b rRNA	-	-	-
VA [auth 0]	L3a rRNA (5S)	-	-	-
UA [auth 2]	L2a rRNA	-	-	-
TA [auth 1]	L1 rRNA	-	-	-
SA [auth Z]	Unk2	-	-	-
RA [auth Y]	PPR*	-	-	-
QA [auth X]	Unk1	-	-	-
PA [auth S]	mL119	-	-	-
OA [auth R]	mL118	-	-	-
NA [auth Q]	mL117	-	-	-
D [auth d]	uL5m	-	-	-
MA [auth P]	mL116	-	-	-
LA [auth O]	mL115	RNA binding binding nucleic acid binding	regulation of cellular process catabolic process negative regulation of biological process RNA metabolic process macromolecule catabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process post-transcriptional regulation of gene expression regulation of RNA metabolic process regulation of mRNA catabolic process negative regulation of cellular process regulation of nucleobase-containing compound metabolic process regulation of biological quality RNA catabolic process regulation of cellular process catabolic process negative regulation of biological process RNA metabolic process macromolecule catabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process post-transcriptional regulation of gene expression regulation of RNA metabolic process regulation of mRNA catabolic process negative regulation of cellular process regulation of nucleobase-containing compound metabolic process regulation of biological quality RNA catabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process mRNA catabolic process regulation of biological process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process regulation of catabolic process gene expression mRNA metabolic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound catabolic process regulation of mRNA stability regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process regulation of RNA stability nucleic acid catabolic process regulation of mitochondrial mRNA stability metabolic process cellular process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of mRNA metabolic process regulation of metabolic process ribonucleoprotein complex biogenesis chloroplast rRNA processing rRNA processing nucleobase-containing compound biosynthetic process cellular component biogenesis RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process cellular component organization or biogenesis RNA processing rRNA metabolic process mitochondrial gene expression mitochondrial RNA processing mitochondrial RNA metabolic process	intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle supramolecular complex ribonucleoprotein granule membrane-bounded organelle plastid cytoplasm intracellular membrane-bounded organelle chloroplast mitochondrion intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle supramolecular complex ribonucleoprotein granule membrane-bounded organelle plastid cytoplasm intracellular membrane-bounded organelle chloroplast mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen organelle lumen
KA [auth N]	mL114	-	-	-
JA [auth M]	mL113	RNA binding binding nucleic acid binding	regulation of cellular process catabolic process negative regulation of biological process RNA metabolic process macromolecule catabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process post-transcriptional regulation of gene expression regulation of RNA metabolic process regulation of mRNA catabolic process negative regulation of cellular process regulation of nucleobase-containing compound metabolic process regulation of biological quality RNA catabolic process regulation of cellular process catabolic process negative regulation of biological process RNA metabolic process macromolecule catabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process post-transcriptional regulation of gene expression regulation of RNA metabolic process regulation of mRNA catabolic process negative regulation of cellular process regulation of nucleobase-containing compound metabolic process regulation of biological quality RNA catabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process mRNA catabolic process regulation of biological process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process regulation of catabolic process gene expression mRNA metabolic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound catabolic process regulation of mRNA stability regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process regulation of RNA stability nucleic acid catabolic process regulation of mitochondrial mRNA stability metabolic process cellular process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of mRNA metabolic process regulation of metabolic process ribonucleoprotein complex biogenesis chloroplast rRNA processing rRNA processing nucleobase-containing compound biosynthetic process cellular component biogenesis RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process cellular component organization or biogenesis RNA processing rRNA metabolic process mitochondrial gene expression mitochondrial RNA processing mitochondrial RNA metabolic process	intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle supramolecular complex ribonucleoprotein granule membrane-bounded organelle plastid cytoplasm intracellular membrane-bounded organelle chloroplast mitochondrion intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle supramolecular complex ribonucleoprotein granule membrane-bounded organelle plastid cytoplasm intracellular membrane-bounded organelle chloroplast mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen organelle lumen
IA [auth C]	bL36m	-	-	-
HA [auth L]	mL87	-	-	-
GA [auth K]	mL80	-	-	-
FA [auth J]	mL59/64	-	-	-
EA [auth I]	mL63/57/60	-	-	-
DA [auth G]	Mitochondrial ribosomal protein L17	structural molecule activity structural constituent of ribosome	-	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
C [auth c]	uL4m	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
CA [auth F]	mL43	-	-	-
BA [auth E]	mL41	-	-	-
AA [auth D]	mL40	-	-	-
Z [auth e]	Plastid ribosomal protein L6	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
Y [auth B]	bL35m	-	-	-
X [auth A]	bL34m	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
W [auth z]	Mitochondrial ribosomal protein L33	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	cellular anatomical structure intracellular anatomical structure cytoplasm protein-containing complex intracellular membraneless organelle ribosomal subunit intracellular organelle ribonucleoprotein complex organelle membraneless organelle ribosome large ribosomal subunit
V [auth y]	bL32m	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome large ribosomal subunit
U [auth x]	Ribosomal_L30 domain-containing protein	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex intracellular membraneless organelle ribosomal subunit ribonucleoprotein complex membraneless organelle ribosome membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex intracellular membraneless organelle ribosomal subunit ribonucleoprotein complex membraneless organelle ribosome large ribosomal subunit
T [auth w]	uL29m	-	-	-
B [auth b]	uL3m	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
S [auth v]	bL28m	structural molecule activity structural constituent of ribosome	-	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
R [auth u]	bL27m	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
Q [auth t]	Ribosomal_TL5_C domain-containing protein	RNA binding binding rRNA binding 5S rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
P [auth s]	KOW domain-containing protein,uL24m	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex ribonucleoprotein complex membraneless organelle intracellular membraneless organelle ribosome
O [auth r]	Mitochondrial ribosomal protein L23	-	-	-
N [auth q]	uL22m	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
M [auth p]	bL21m	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome
L [auth o]	50S ribosomal protein L20	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
K [auth n]	Mitochondrial ribosomal protein L19	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
J [auth m]	Mitochondrial ribosomal protein L17,bL17m	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
A [auth a]	Ribosomal_L2_C domain-containing protein	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome transferase activity catalytic activity	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure plastid organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure plastid organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
I [auth l]	IPR000114	Large ribosomal subunit protein uL16, bacteria	Family
I [auth l]	IPR036920	Large ribosomal subunit protein uL16 superfamily	Homologous Superfamily
I [auth l]	IPR016180	Large ribosomal subunit protein uL16 domain	Domain
I [auth l]	IPR047873	Large ribosomal subunit protein uL16	Family
H [auth k]	IPR021131	Large ribosomal subunit protein uL15/eL18	Domain
H [auth k]	IPR030878	Large ribosomal subunit protein uL15	Family
H [auth k]	IPR036227	Large ribosomal subunit protein uL15/eL18 superfamily	Homologous Superfamily
H [auth k]	IPR005749	Large ribosomal subunit protein uL15, bacteria	Family
G [auth j]	IPR036853	Large ribosomal subunit protein uL14 superfamily	Homologous Superfamily
G [auth j]	IPR000218	Large ribosomal subunit protein uL14	Family
G [auth j]	IPR019972	Large ribosomal subunit protein uL14, conserved site	Conserved Site
F [auth i]	IPR005822	Large ribosomal subunit protein uL13	Family
F [auth i]	IPR005823	Large ribosomal subunit protein uL13, bacteria	Family
F [auth i]	IPR036899	Large ribosomal subunit protein uL13 superfamily	Homologous Superfamily
E [auth f]	IPR009027	Large ribosomal subunit protein bL9/RNase H1, N-terminal	Homologous Superfamily
E [auth f]	IPR036935	Large ribosomal subunit protein bL9, N-terminal domain superfamily	Homologous Superfamily
E [auth f]	IPR036791	Large ribosomal subunit protein bL9, C-terminal domain superfamily	Homologous Superfamily
E [auth f]	IPR020070	Large ribosomal subunit protein bL9, N-terminal	Domain
E [auth f]	IPR000244	Large ribosomal subunit protein bL9	Family
D [auth d]	IPR022803	Large ribosomal subunit protein uL5 domain superfamily	Homologous Superfamily
LA [auth O]	IPR050870	FAST kinase domain-containing	Family
LA [auth O]	IPR016024	Armadillo-type fold	Homologous Superfamily
DA [auth G]	IPR015797	NUDIX hydrolase-like domain superfamily	Homologous Superfamily
DA [auth G]	IPR040008	Large ribosomal subunit protein mL46	Family
DA [auth G]	IPR033650	Large ribosomal subunit protein mL46, NUDIX domain	Domain
C [auth c]	IPR013005	Large ribosomal subunit protein uL4-like	Family
C [auth c]	IPR002136	Large ribosomal subunit protein uL4	Family
C [auth c]	IPR023574	Large ribosomal subunit protein uL4 domain superfamily	Homologous Superfamily
Z [auth e]	IPR020040	Large ribosomal subunit protein uL6, alpha-beta domain	Domain
Z [auth e]	IPR036789	Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily	Homologous Superfamily
Z [auth e]	IPR000702	Large ribosomal subunit protein uL6-like	Family
Z [auth e]	IPR019906	Large ribosomal subunit protein uL6, bacteria	Family
Z [auth e]	IPR002358	Large ribosomal subunit protein uL6, conserved site	Conserved Site
X [auth A]	IPR000271	Large ribosomal subunit protein bL34	Family
W [auth z]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
W [auth z]	IPR038584	Large ribosomal subunit protein bL33 superfamily	Homologous Superfamily
W [auth z]	IPR001705	Large ribosomal subunit protein bL33	Family
V [auth y]	IPR002677	Large ribosomal subunit protein bL32	Family
V [auth y]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
U [auth x]	IPR036919	Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily	Homologous Superfamily
U [auth x]	IPR005996	Large ribosomal subunit protein uL30, bacteria	Family
U [auth x]	IPR016082	Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain	Domain
B [auth b]	IPR019927	Large ribosomal subunit protein uL3, bacteria/organella	Family
B [auth b]	IPR009000	Translation protein, beta-barrel domain superfamily	Homologous Superfamily
B [auth b]	IPR000597	Large ribosomal subunit protein uL3	Family
S [auth v]	IPR037147	Large ribosomal subunit protein bL28 superfamily	Homologous Superfamily
S [auth v]	IPR026569	Large ribosomal subunit protein bL28	Family
S [auth v]	IPR034704	Large ribosomal subunit protein bL28/bL31-like superfamily	Homologous Superfamily
R [auth u]	IPR001684	Large ribosomal subunit protein bL27	Family
R [auth u]	IPR018261	Large ribosomal subunit protein bL27, conserved site	Conserved Site
Q [auth t]	IPR011035	Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily	Homologous Superfamily
Q [auth t]	IPR037121	Large ribosomal subunit protein bL25, C-terminal	Homologous Superfamily
Q [auth t]	IPR020057	Large ribosomal subunit protein bL25, beta domain	Domain
Q [auth t]	IPR020930	Large ribosomal subunit protein uL5, bacteria	Family
P [auth s]	IPR057264	Large ribosomal subunit protein uL24, C-terminal domain	Domain
P [auth s]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
P [auth s]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
P [auth s]	IPR003256	Large ribosomal subunit protein uL24	Family
P [auth s]	IPR041988	Large ribosomal subunit protein uL24, KOW domain	Domain
P [auth s]	IPR005824	KOW	Domain
P [auth s]	IPR005825	Large ribosomal subunit protein uL24, conserved site	Conserved Site
N [auth q]	IPR036394	Ribosomal protein uL22 superfamily	Homologous Superfamily
N [auth q]	IPR001063	Large ribosomal subunit protein uL22	Family
N [auth q]	IPR047867	Large ribosomal subunit protein uL22, bacteria/organella	Family
M [auth p]	IPR028909	Large ribosomal subunit protein bL21-like	Family
M [auth p]	IPR001787	Large ribosomal subunit protein bL21	Family
M [auth p]	IPR036164	Large ribosomal subunit protein bL21-like superfamily	Homologous Superfamily
L [auth o]	IPR049946	Large ribosomal subunit protein bL20, conserved site	Conserved Site
L [auth o]	IPR035566	Ribosomal protein bL20, C-terminal	Homologous Superfamily
L [auth o]	IPR005813	Large ribosomal subunit protein bL20	Family
K [auth n]	IPR001857	Large ribosomal subunit protein bL19	Family
K [auth n]	IPR038657	Large ribosomal subunit protein bL19 superfamily	Homologous Superfamily
K [auth n]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
J [auth m]	IPR036373	Large ribosomal subunit protein bL17 superfamily	Homologous Superfamily
J [auth m]	IPR047859	Large ribosomal subunit protein bL17, conserved site	Conserved Site
J [auth m]	IPR000456	Large ribosomal subunit protein bL17	Family
A [auth a]	IPR005880	Large ribosomal subunit protein uL2, bacteria/organella	Family
A [auth a]	IPR022669	Large ribosomal subunit protein uL2, C-terminal	Domain
A [auth a]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
A [auth a]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
A [auth a]	IPR022671	Large ribosomal subunit protein uL2, conserved site	Conserved Site
A [auth a]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
A [auth a]	IPR022666	Large ribosomal subunit protein uL2, RNA-binding domain	Domain
A [auth a]	IPR014726	Large ribosomal subunit protein uL2, domain 3	Homologous Superfamily
A [auth a]	IPR002171	Large ribosomal subunit protein uL2	Family