Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyCore histone-like8070531 3001387 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyCore histone-like8070531 3001387 SCOP2B (2022-06-29)
I [auth a]SCOP2B SuperfamilyCore histone-like8070531 3001387 SCOP2B (2022-06-29)
M [auth e]SCOP2B SuperfamilyCore histone-like8070531 3001387 SCOP2B (2022-06-29)
R [auth K]SCOP2B SuperfamilyCore histone-like8070531 3001387 SCOP2B (2022-06-29)
V [auth O]SCOP2B SuperfamilyCore histone-like8070531 3001387 SCOP2B (2022-06-29)
J [auth b]SCOP2B SuperfamilyCore histone-like8070545 3001387 SCOP2B (2022-06-29)
W [auth P]SCOP2B SuperfamilyCore histone-like8070545 3001387 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyCore histone-like8070545 3001387 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyCore histone-like8070545 3001387 SCOP2B (2022-06-29)
N [auth f]SCOP2B SuperfamilyCore histone-like8070545 3001387 SCOP2B (2022-06-29)
S [auth L]SCOP2B SuperfamilyCore histone-like8070545 3001387 SCOP2B (2022-06-29)
O [auth g]SCOP2B SuperfamilyCore histone-like8039342 3001387 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyCore histone-like8039342 3001387 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyCore histone-like8039342 3001387 SCOP2B (2022-06-29)
K [auth c]SCOP2B SuperfamilyCore histone-like8039342 3001387 SCOP2B (2022-06-29)
T [auth M]SCOP2B SuperfamilyCore histone-like8039342 3001387 SCOP2B (2022-06-29)
X [auth Q]SCOP2B SuperfamilyCore histone-like8039342 3001387 SCOP2B (2022-06-29)
Y [auth R]SCOP2B SuperfamilyCore histone-like8039341 3001387 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyCore histone-like8039341 3001387 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyCore histone-like8039341 3001387 SCOP2B (2022-06-29)
L [auth d]SCOP2B SuperfamilyCore histone-like8039341 3001387 SCOP2B (2022-06-29)
P [auth h]SCOP2B SuperfamilyCore histone-like8039341 3001387 SCOP2B (2022-06-29)
U [auth N]SCOP2B SuperfamilyCore histone-like8039341 3001387 SCOP2B (2022-06-29)
Q [auth u]SCOP2B SuperfamilyWinged helix DNA-binding domain8102134 3000034 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AHistonee7peuA1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
EHistonee7peuE1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
I [auth a]Histonee7peua1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
M [auth e]Histonee7peue1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
R [auth K]Histonee7peuK1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
V [auth O]Histonee7peuO1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
J [auth b]Histone_1e7peub1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
W [auth P]Histone_1e7peuP1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
BHistone_1e7peuB1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
FHistone_1e7peuF1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
N [auth f]Histone_1e7peuf1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
S [auth L]Histone_1e7peuL1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
O [auth g]Histone_1e7peug1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
CHistone_1e7peuC1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
GHistone_1e7peuG1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
K [auth c]Histone_1e7peuc1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
T [auth M]Histone_1e7peuM1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
X [auth Q]Histone_1e7peuQ1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
Y [auth R]Histonee7peuR1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
DHistonee7peuD1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
HHistonee7peuH1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
L [auth d]Histonee7peud1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
P [auth h]Histonee7peuh1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
U [auth N]Histonee7peuN1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
Q [auth u]Linker_histonee7peuu1 A: alpha arraysX: HTHH: HTHT: wingedF: Linker_histoneECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00125Core histone H2A/H2B/H3/H4 (Histone)Core histone H2A/H2B/H3/H4- Domain
PF15511Centromere kinetochore component CENP-T histone fold (CENP-T_C)Centromere kinetochore component CENP-T histone foldCENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly asso ...CENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly associate with CENP-A, but with histone H3 in the centromere region. CENP-T and -W form a hetero-tetramer with CENP-S and -X and bind to a ~100 bp region of nucleosome-free DNA forming a nucleosome-like structure. The DNA-CENP-T-W-S-X complex is likely to be associated with histone H3-containing nucleosomes rather than with CENP-nucleosomes. This domain is the C-terminal histone fold domain of CENP-T, which associates with chromatin [2-3].
Domain
PF16211C-terminus of histone H2A (Histone_H2A_C)C-terminus of histone H2A- Family
PF00125Core histone H2A/H2B/H3/H4 (Histone)Core histone H2A/H2B/H3/H4- Domain
PF00125Core histone H2A/H2B/H3/H4 (Histone)Core histone H2A/H2B/H3/H4- Domain
Q [auth u]PF00538linker histone H1 and H5 family (Linker_histone)linker histone H1 and H5 familyLinker histone H1 is an essential component of chromatin structure. H1 links nucleosomes into higher order structures Histone H1 is replaced by histone H5 in some cell types.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Histone H3.2
Histone H4
Histone H2A type 1-B/E
Histone H2B type 1-K
Q [auth u]Histone H1.4
Z [auth I]DNA (522-MER)---
AA [auth J]DNA (522-MER)---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR009072Histone-foldHomologous Superfamily
IPR007125Histone H2A/H2B/H3Domain
IPR000164Histone H3/CENP-AFamily
IPR009072Histone-foldHomologous Superfamily
IPR035425CENP-T/Histone H4, histone foldDomain
IPR001951Histone H4Family
IPR019809Histone H4, conserved siteConserved Site
IPR004823TATA box binding protein associated factor (TAF), histone-like fold domainDomain
IPR009072Histone-foldHomologous Superfamily
IPR007125Histone H2A/H2B/H3Domain
IPR002119Histone H2AFamily
IPR032454Histone H2A, C-terminal domainDomain
IPR032458Histone H2A conserved siteConserved Site
IPR009072Histone-foldHomologous Superfamily
IPR007125Histone H2A/H2B/H3Domain
IPR000558Histone H2BFamily
Q [auth u]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
Q [auth u]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
Q [auth u]IPR005818Linker histone H1/H5, domain H15Domain
Q [auth u]IPR005819Linker histone H1/H5Family

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosQ71DI3
PharosP62805
PharosP04908
PharosO60814
Q [auth u]PharosP10412