7P2D
Structure of alphaMbeta2/Cd11bCD18 headpiece in complex with a nanobody
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | vWA-like | 8033178 | 3000832 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF08441 | e7p2dA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF08441 | ECOD (1.6) |
A | PF01839 | e7p2dA1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF01839 | ECOD (1.6) |
A | PF00092 | e7p2dA3 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: vWA-like | F: PF00092 | ECOD (1.6) |
B | F_UNCLASSIFIED | e7p2dB2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF00362 | e7p2dB3 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: vWA-like | F: PF00362 | ECOD (1.6) |
B | PF17205 | e7p2dB4 | A: few secondary structure elements | X: Trefoil/Plexin domain-like (From Topology) | H: Trefoil/Plexin domain-like (From Topology) | T: Trefoil/Plexin domain-like | F: PF17205 | ECOD (1.6) |
B | PF18372 | e7p2dB1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: PF18372 | ECOD (1.6) |
C | PF07686 | e7p2dC1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
Heavy Chain | IGHV1 | - | isoform 2 of integrin alpha-m | SAbDab (2024-05-03) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00092 | von Willebrand factor type A domain (VWA) | von Willebrand factor type A domain | - | Domain | |
PF01839 | FG-GAP repeat (FG-GAP) | FG-GAP repeat | - | Repeat | |
PF08441 | Integrin alpha Ig-like domain 1 (Integrin_A_Ig_1) | Integrin alpha Ig-like domain 1 | This domain is found in integrin alpha and integrin alpha precursors to the C terminus of a number of Pfam:PF01839 repeats and to the N-terminus of the Pfam:PF00357 cytoplasmic region. This region is composed of an immunoglobulin-like domain. | Domain | |
PF17205 | Integrin plexin domain (PSI_integrin) | Integrin plexin domain | This short disulphide rich domain is found at the N-terminus of integrin beta chains. | Domain | |
PF00362 | Integrin beta chain VWA domain (Integrin_beta) | Integrin beta chain VWA domain | Integrins have been found in animals and their homologues have also been found in cyanobacteria, probably due to horizontal gene transfer [1]. This domain corresponds to the integrin beta VWA domain. | Domain | |