Structure of the hexameric 5S RNP from C. thermophilum
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B [auth A] | SCOP2B Superfamily | Translational machinery components | 8106194 | 3000571 | SCOP2B (2022-06-29) |
| A [auth B] | SCOP2B Superfamily | RL5-like | 8077505 | 3001709 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| G [auth F] | e7ozsF1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: V-set | F: | ECOD (20:10:01) | |
| D [auth C] | e7ozsC1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: V-set | F: | ECOD (20:10:01) | |
| C [auth D] | e7ozsD1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: V-set | F: | ECOD (20:10:01) | |
| B [auth A] | e7ozsA1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: V-set | F: | ECOD (20:10:01) | |
| A [auth B] | e7ozsB1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: V-set | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B [auth A] | 3.30.420.100 | Alpha Beta | 2-Layer Sandwich | Nucleotidyltransferase | domain 5 | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| G [auth F] | PF25567 | SYO1-like, TPR repeats (TPR_SYO1) | SYO1-like, TPR repeats | - | Repeat |
| D [auth C] | PF04427 | Brix domain (Brix) | Brix domain | Domain | |
| C [auth D] | PF04939 | Ribosome biogenesis regulatory protein (RRS1) (RRS1) | Ribosome biogenesis regulatory protein (RRS1) | - | Family |
| B [auth A] | PF17144 | Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e) | Ribosomal large subunit proteins 60S L5, and 50S L18 | - | Family |
| B [auth A] | PF14204 | Ribosomal L18 C-terminal region (Ribosomal_L18_c) | Ribosomal L18 C-terminal region | This domain is the C-terminal end of ribosomal L18/L5 proteins. | Domain |
| A [auth B] | PF00281 | Ribosomal protein L5 (Ribosomal_L5) | Ribosomal protein L5 | Domain |














