7OYD

Cryo-EM structure of a rabbit 80S ribosome with zebrafish Dap1b

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
F [auth AA]	SCOP2B Superfamily	SIS domain/Ribosomal protein S2-like	8097826	3001397	SCOP2B (2022-06-29)
H [auth B]	SCOP2B Superfamily	Translational proteins	8078357	3000811	SCOP2B (2022-06-29)
I [auth BB]	SCOP2B Superfamily	Ribosomal S3Ae-like	8053216	3002166	SCOP2B (2022-06-29)
K [auth C]	SCOP2B Superfamily	Ribosomal protein L4	8052829	3001146	SCOP2B (2022-06-29)
K [auth C]	SCOP2B Superfamily	60S ribosomal protein L4 C-terminal domain-like	8052828	3002143	SCOP2B (2022-06-29)
N [auth D]	SCOP2B Superfamily	Translational machinery components	8052886	3000571	SCOP2B (2022-06-29)
P [auth Dd]	SCOP2B Superfamily	Glucocorticoid receptor-like (DNA-binding domain)	8052584	3000068	SCOP2B (2022-06-29)
S [auth Ee]	SCOP2B Superfamily	Ribosomal protein S30e-like	8053455	3002190	SCOP2B (2022-06-29)
U [auth FF]	SCOP2B Superfamily	Ribosomal protein S7	8066001	3000799	SCOP2B (2022-06-29)
AA [auth I]	SCOP2B Superfamily	Ribosomal protein L16p/L10e	8097320	3000884	SCOP2B (2022-06-29)
BA [auth II]	SCOP2B Superfamily	50S Ribosomal protein L14-like	8053075	3000433	SCOP2B (2022-06-29)
CA [auth J]	SCOP2B Superfamily	RL5-like	8073894	3001709	SCOP2B (2022-06-29)
FA [auth KK]	SCOP2B Superfamily	Winged helix DNA-binding domain	8055720	3000034	SCOP2B (2022-06-29)
HA [auth LL]	SCOP2B Superfamily	Nucleic acid-binding proteins	8052707	3000135	SCOP2B (2022-06-29)
HA [auth LL]	SCOP2B Superfamily	Ribosomal S17 N-terminal domain-like	8052708	3002138	SCOP2B (2022-06-29)
JA [auth N]	SCOP2B Superfamily	Ribosomal proteins S24e L23 and L15e	8082477	3000210	SCOP2B (2022-06-29)
KA [auth NN]	SCOP2B Superfamily	S15/NS1 RNA-binding domain	8052971	3001284	SCOP2B (2022-06-29)
KA [auth NN]	SCOP2B Superfamily	Homeodomain-like	8052970	3000001	SCOP2B (2022-06-29)
QA [auth QQ]	SCOP2B Superfamily	Ribosomal protein S5 domain 2-like	8082683	3000100	SCOP2B (2022-06-29)
RA [auth R]	SCOP2B Superfamily	Ribosomal protein L19 (L19e)	8107568	3000890	SCOP2B (2022-06-29)
WA [auth TT]	SCOP2B Superfamily	Winged helix DNA-binding domain	8089322	3000034	SCOP2B (2022-06-29)
YA [auth UU]	SCOP2B Superfamily	Ribosomal protein S10	8097814	3001336	SCOP2B (2022-06-29)
ZA [auth V]	SCOP2B Superfamily	50S Ribosomal protein L14-like	8072048	3000433	SCOP2B (2022-06-29)
CB [auth WW]	SCOP2B Superfamily	Ribosomal protein S8	8079081	3000709	SCOP2B (2022-06-29)
FB [auth Y]	SCOP2B Superfamily	Translation proteins SH3-like KOW motif containing domain	8076754	3000334	SCOP2B (2022-06-29)
JB [auth a]	SCOP2B Superfamily	Ribosomal proteins L15p and L18e	8097818	3001045	SCOP2B (2022-06-29)
LB [auth c]	SCOP2B Superfamily	L30e-like	8094953	3001739	SCOP2B (2022-06-29)
NB [auth e]	SCOP2B Superfamily	Ribosomal protein L32e	8102088	3000982	SCOP2B (2022-06-29)
PB [auth g]	SCOP2B Superfamily	Ribosomal protein L34e-like	8103328	3002203	SCOP2B (2022-06-29)
RB [auth i]	SCOP2B Superfamily	Ribosomal protein L36e	8053119	3002161	SCOP2B (2022-06-29)
TB [auth k]	SCOP2B Superfamily	Ribosomal L38e protein-like	8093716	3002206	SCOP2B (2022-06-29)
UB [auth l]	SCOP2B Superfamily	Ribosomal protein L39e	8095597	3001756	SCOP2B (2022-06-29)
YB [auth p]	SCOP2B Superfamily	Zn-binding ribosomal proteins	8101435	3001320	SCOP2B (2022-06-29)
M [auth Cc]	SCOP2B Superfamily	Nucleic acid-binding proteins	8095265	3000135	SCOP2B (2022-06-29)
R [auth EE]	SCOP2B Superfamily	Alpha-L RNA-binding motif	8052745	3001473	SCOP2B (2022-06-29)
R [auth EE]	SCOP2B Superfamily	Nucleic acid-binding proteins	8052746	3000135	SCOP2B (2022-06-29)
R [auth EE]	SCOP2B Superfamily	Translation proteins SH3-like KOW motif containing domain	8052747	3000334	SCOP2B (2022-06-29)
X [auth Gg]	SCOP2B Superfamily	WD40 repeat-like	8097816	3001694	SCOP2B (2022-06-29)
UA [auth SS]	SCOP2B Superfamily	S13-like H2TH domain	8101439	3000053	SCOP2B (2022-06-29)
HB [auth Z]	SCOP2B Superfamily	Translation proteins SH3-like KOW motif containing domain	8053047	3000334	SCOP2B (2022-06-29)
IB [auth ZZ]	SCOP2B Superfamily	Winged helix DNA-binding domain	8090991	3000034	SCOP2B (2022-06-29)
OB [auth f]	SCOP2B Superfamily	Translational proteins	8093714	3000811	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
E [auth A]	PF00181	e7oydA2	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: PF00181	ECOD (1.6)
E [auth A]	PF03947	e7oydA1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: PF03947	ECOD (1.6)
F [auth AA]	PF00318	e7oydAA1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Ribosomal protein S2/SIS domain (From Topology)	T: Ribosomal protein S2/SIS domain	F: PF00318	ECOD (1.6)
G [auth Aa]	PF01283	e7oydAa1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: LIM domain-like	F: PF01283	ECOD (1.6)
H [auth B]	PF00297	e7oydB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: PF00297	ECOD (1.6)
I [auth BB]	PF01015	e7oydBB1	A: beta barrels	X: Ribosomal protein L25-like	H: 40S ribosomal protein S3A N-terminal domain (From Topology)	T: 40S ribosomal protein S3A N-terminal domain	F: PF01015	ECOD (1.6)
I [auth BB]	PF01015	e7oydBB2	A: a+b two layers	X: T-fold	H: 40S ribosomal protein S3A C-terminal domain (From Topology)	T: 40S ribosomal protein S3A C-terminal domain	F: PF01015	ECOD (1.6)
K [auth C]	PF00573	e7oydC1	A: a/b three-layered sandwiches	X: Ribosomal protein L4 (From Topology)	H: Ribosomal protein L4 (From Topology)	T: Ribosomal protein L4	F: PF00573	ECOD (1.6)
K [auth C]	PF14374	e7oydC2	A: extended segments	X: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)	H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)	T: C-terminal helical region in 60S ribosomal protein L4 (L4p)	F: PF14374	ECOD (1.6)
L [auth CC]	PF03719	e7oydCC1	A: a+b two layers	X: Ribosomal protein S5 domain 2-like (From Topology)	H: Ribosomal protein S5 domain 2-like (From Topology)	T: Ribosomal protein S5 domain 2-like	F: PF03719	ECOD (1.6)
L [auth CC]	PF00333	e7oydCC2	A: a+b two layers	X: dsRBD-like	H: dsRNA-binding domain-like (From Topology)	T: dsRNA-binding domain-like	F: PF00333	ECOD (1.6)
L [auth CC]	PF00333	e7oydCC3	A: extended segments	X: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)	H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)	T: N-terminal region in 40S ribosomal protein rpS2 (S5p)	F: PF00333	ECOD (1.6)
N [auth D]	PF14204,PF17144	e7oydD1	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: PF14204,PF17144	ECOD (1.6)
O [auth DD]	PF00189	e7oydDD2	A: a+b two layers	X: T-fold	H: Ribosomal protein S3-C (From Topology)	T: Ribosomal protein S3-C	F: PF00189	ECOD (1.6)
O [auth DD]	PF07650	e7oydDD1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: KH-domains	T: Prokaryotic type KH domain (KH-domain type II)	F: PF07650	ECOD (1.6)
P [auth Dd]	PF00253	e7oydDd1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: LIM domain-like	F: PF00253	ECOD (1.6)
Q [auth E]	PF01159,PF03868	e7oydE1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: PF01159,PF03868	ECOD (1.6)
S [auth Ee]	PF04758	e7oydEe1	A: extended segments	X: 40S ribosomal protein S30 (S30e) (From Topology)	H: 40S ribosomal protein S30 (S30e) (From Topology)	T: 40S ribosomal protein S30 (S30e)	F: PF04758	ECOD (1.6)
T [auth F]	PF00327,PF08079	e7oydF1	A: a+b two layers	X: Ribosomal protein L30p/L7e (From Topology)	H: Ribosomal protein L30p/L7e (From Topology)	T: Ribosomal protein L30p/L7e	F: PF00327,PF08079	ECOD (1.6)
U [auth FF]	PF00177	e7oydFF1	A: alpha arrays	X: Ribosomal protein S7 (From Topology)	H: Ribosomal protein S7 (From Topology)	T: Ribosomal protein S7	F: PF00177	ECOD (1.6)
V [auth G]	PF01248	e7oydG1	A: a+b three layers	X: Bacillus chorismate mutase-like	H: L30e-like (From Topology)	T: L30e-like	F: PF01248	ECOD (1.6)
W [auth GG]	PF01092	e7oydGG1	A: beta barrels	X: Ribosomal protein L25-like	H: Ribosomal protein L25-like (From Topology)	T: Ribosomal protein L25-like	F: PF01092	ECOD (1.6)
Z [auth HH]	PF01251	e7oydHH2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: 40S ribosomal protein S7-A (From Topology)	T: 40S ribosomal protein S7-A	F: PF01251	ECOD (1.6)
AA [auth I]	PF00252	e7oydI1	A: a+b complex topology	X: alpha/beta-Hammerhead/Barrel-sandwich hybrid	H: alpha/beta-Hammerhead/Barrel-sandwich hybrid	T: Ribosomal protein L10e	F: PF00252	ECOD (1.6)
BA [auth II]	PF01201	e7oydII1	A: beta barrels	X: Ribosomal protein L14-like	H: Ribosomal protein L14-related (From Topology)	T: Ribosomal protein L14-related	F: PF01201	ECOD (1.6)
CA [auth J]	PF00281,PF00673	e7oydJ1	A: a+b two layers	X: Ribosomal protein L5 (From Topology)	H: Ribosomal protein L5 (From Topology)	T: Ribosomal protein L5	F: PF00281,PF00673	ECOD (1.6)
DA [auth JJ]	PF00163,PF01479	e7oydJJ1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Alpha-L RNA-binding motif	F: PF00163,PF01479	ECOD (1.6)
FA [auth KK]	PF03501	e7oydKK1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: PF03501	ECOD (1.6)
HA [auth LL]	PF00366,PF16205	e7oydLL1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: PF00366,PF16205	ECOD (1.6)
IA [auth M]	PF00467,PF01929	e7oydM1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: PF00467,PF01929	ECOD (1.6)
JA [auth N]	PF00827	e7oydN1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal proteins S24e, L23 and L15e (From Topology)	T: Ribosomal proteins S24e, L23 and L15e	F: PF00827	ECOD (1.6)
KA [auth NN]	PF08069	e7oydNN1	A: alpha arrays	X: HTH	H: 40S ribosomal protein S13 N-terminal domain (From Topology)	T: 40S ribosomal protein S13 N-terminal domain	F: PF08069	ECOD (1.6)
KA [auth NN]	PF00312	e7oydNN2	A: alpha arrays	X: S15/NS1 RNA-binding domain (From Topology)	H: S15/NS1 RNA-binding domain (From Topology)	T: S15/NS1 RNA-binding domain	F: PF00312	ECOD (1.6)
MA [auth OO]	PF00411	e7oydOO1	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: PF00411	ECOD (1.6)
OA [auth PP]	PF00203	e7oydPP1	A: a+b two layers	X: Ribosomal protein S19 (From Topology)	H: Ribosomal protein S19 (From Topology)	T: Ribosomal protein S19	F: PF00203	ECOD (1.6)
PA [auth Q]	PF17135	e7oydQ1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal proteins L15p and L18e (From Topology)	T: Ribosomal proteins L15p and L18e	F: PF17135	ECOD (1.6)
QA [auth QQ]	PF00380	e7oydQQ1	A: a+b two layers	X: Ribosomal protein S5 domain 2-like (From Topology)	H: Ribosomal protein S5 domain 2-like (From Topology)	T: Ribosomal protein S5 domain 2-like	F: PF00380	ECOD (1.6)
RA [auth R]	PF01280	e7oydR2	A: alpha arrays	X: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)	H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)	T: Ribosomal protein L19 (L19e) N-terminal domain	F: PF01280	ECOD (1.6)
RA [auth R]	PF01280	e7oydR1	A: alpha bundles	X: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)	H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)	T: Ribosomal protein L19 (L19e) C-terminal domain	F: PF01280	ECOD (1.6)
SA [auth RR]	PF00833	e7oydRR1	A: alpha arrays	X: HTH	H: HTH	T: FF domain	F: PF00833	ECOD (1.6)
TA [auth S]	F_UNCLASSIFIED	e7oydS1	A: a+b two layers	X: GP2-like	H: RplX-like (From Topology)	T: RplX-like	F: F_UNCLASSIFIED	ECOD (1.6)
TA [auth S]	PF01775	e7oydS2	A: a+b two layers	X: GP2-like	H: RplX-like (From Topology)	T: RplX-like	F: PF01775	ECOD (1.6)
VA [auth T]	PF01157	e7oydT1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: PF01157	ECOD (1.6)
WA [auth TT]	PF01090	e7oydTT1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: PF01090	ECOD (1.6)
XA [auth U]	PF01776	e7oydU1	A: a+b two layers	X: Ribosomal protein L22e (From Topology)	H: Ribosomal protein L22e (From Topology)	T: Ribosomal protein L22e	F: PF01776	ECOD (1.6)
YA [auth UU]	PF00338	e7oydUU1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal protein S10 (From Topology)	T: Ribosomal protein S10	F: PF00338	ECOD (1.6)
ZA [auth V]	PF00238	e7oydV1	A: beta barrels	X: Ribosomal protein L14-like	H: Ribosomal protein L14-related (From Topology)	T: Ribosomal protein L14-related	F: PF00238	ECOD (1.6)
AB [auth VV]	PF01249	e7oydVV1	A: a+b two layers	X: 40S ribosomal protein rpS21 (S21e) (From Topology)	H: 40S ribosomal protein rpS21 (S21e) (From Topology)	T: 40S ribosomal protein rpS21 (S21e)	F: PF01249	ECOD (1.6)
BB [auth W]	PF01246	e7oydW1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: LIM domain-like	F: PF01246	ECOD (1.6)
CB [auth WW]	PF00410	e7oydWW2	A: a+b two layers	X: R3H domain-like	H: Ribosomal protein S8, N-terminal domain (From Topology)	T: Ribosomal protein S8, N-terminal domain	F: PF00410	ECOD (1.6)
CB [auth WW]	PF00410	e7oydWW1	A: a+b two layers	X: Ribosomal protein S8, C-terminal domain (From Topology)	H: Ribosomal protein S8, C-terminal domain (From Topology)	T: Ribosomal protein S8, C-terminal domain	F: PF00410	ECOD (1.6)
DB [auth X]	PF00276,PF03939	e7oydX1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal proteins S24e, L23 and L15e (From Topology)	T: Ribosomal proteins S24e, L23 and L15e	F: PF00276,PF03939	ECOD (1.6)
FB [auth Y]	PF16906	e7oydY1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: PF16906	ECOD (1.6)
GB [auth YY]	PF01282	e7oydYY1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal proteins S24e, L23 and L15e (From Topology)	T: Ribosomal proteins S24e, L23 and L15e	F: PF01282	ECOD (1.6)
JB [auth a]	PF00828	e7oyda1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal proteins L15p and L18e (From Topology)	T: Ribosomal proteins L15p and L18e	F: PF00828	ECOD (1.6)
LB [auth c]	PF01248	e7oydc1	A: a+b three layers	X: Bacillus chorismate mutase-like	H: L30e-like (From Topology)	T: L30e-like	F: PF01248	ECOD (1.6)
NB [auth e]	PF01655	e7oyde1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal protein L32e (From Topology)	T: Ribosomal protein L32e	F: PF01655	ECOD (1.6)
PB [auth g]	PF01199	e7oydg1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: RPL34 (From Topology)	T: RPL34	F: PF01199	ECOD (1.6)
RB [auth i]	PF01158	e7oydi1	A: alpha arrays	X: 60S ribosomal protein rpL36 (L36e) (From Topology)	H: 60S ribosomal protein rpL36 (L36e) (From Topology)	T: 60S ribosomal protein rpL36 (L36e)	F: PF01158	ECOD (1.6)
TB [auth k]	PF01781	e7oydk1	A: a+b two layers	X: SRP9/14-like	H: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)	T: Signal recognition particle alu RNA binding heterodimer SRP9/14-related	F: PF01781	ECOD (1.6)
UB [auth l]	PF00832	e7oydl1	A: extended segments	X: Ribosomal protein L39e (From Topology)	H: Ribosomal protein L39e (From Topology)	T: Ribosomal protein L39e	F: PF00832	ECOD (1.6)
VB [auth m]	PF01020	e7oydm1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: PF01020	ECOD (1.6)
WB [auth n]	PF05162	e7oydn1	A: extended segments	X: Ribosomal protein L41-A (From Topology)	H: Ribosomal protein L41-A (From Topology)	T: Ribosomal protein L41-A	F: PF05162	ECOD (1.6)
XB [auth o]	PF00935	e7oydo1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: PF00935	ECOD (1.6)
YB [auth p]	PF01780	e7oydp1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: PF01780	ECOD (1.6)
ZB [auth r]	PF01778	e7oydr1	A: a+b two layers	X: RPL28 (From Topology)	H: RPL28 (From Topology)	T: RPL28	F: PF01778	ECOD (1.6)
AC [auth s]	PF00466	e7oyds1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal protein L10-like (From Topology)	T: Ribosomal protein L10-like	F: PF00466	ECOD (1.6)
AC [auth s]	PF17777	e7oyds2	A: a+b two layers	X: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)	H: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)	T: Insertion domain in 60S ribosomal protein rpP0 (L10P)	F: PF17777	ECOD (1.6)
CC [auth t]	PF01287	e7oydt1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: PF01287	ECOD (1.6)
CC [auth t]	PF21485	e7oydt2	A: beta barrels	X: SH3	H: SH3	T: SH3	F: PF21485	ECOD (1.6)
DC [auth v]	F_UNCLASSIFIED	e7oydv4	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: F_UNCLASSIFIED	ECOD (1.6)
DC [auth v]	PF03764	e7oydv2	A: a+b two layers	X: Ribosomal protein S5 domain 2-like (From Topology)	H: Ribosomal protein S5 domain 2-like (From Topology)	T: Ribosomal protein S5 domain 2-like	F: PF03764	ECOD (1.6)
DC [auth v]	PF00679	e7oydv3	A: a+b two layers	X: Alpha-beta plaits	H: EF-G C-terminal domain-like (From Topology)	T: EF-G C-terminal domain-like	F: PF00679	ECOD (1.6)
DC [auth v]	PF14492	e7oydv5	A: a+b two layers	X: Alpha-beta plaits	H: EF-G C-terminal domain-like (From Topology)	T: EF-G C-terminal domain-like	F: PF14492	ECOD (1.6)
DC [auth v]	PF00009	e7oydv1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00009	ECOD (1.6)
A [auth x]	PF00687	e7oydx2	A: a+b two layers	X: a+b domain in Ribosomal protein L1 (From Topology)	H: a+b domain in Ribosomal protein L1 (From Topology)	T: a+b domain in Ribosomal protein L1	F: PF00687	ECOD (1.6)
A [auth x]	PF00687	e7oydx1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Rossmann-like domain in Ribosomal protein L1 (From Topology)	T: Rossmann-like domain in Ribosomal protein L1	F: PF00687	ECOD (1.6)
J [auth Bb]	PF01667	e7oydBb1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: PF01667	ECOD (1.6)
M [auth Cc]	PF01200	e7oydCc1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: PF01200	ECOD (1.6)
R [auth EE]	PF00900	e7oydEE2	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: PF00900	ECOD (1.6)
R [auth EE]	PF00467,PF16121	e7oydEE3	A: beta barrels	X: SH3	H: SH3	T: SH3	F: PF00467,PF16121	ECOD (1.6)
R [auth EE]	PF00900,PF01479,PF08071	e7oydEE1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Alpha-L RNA-binding motif	F: PF00900,PF01479,PF08071	ECOD (1.6)
X [auth Gg]	PF00400	e7oydGg1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: PF00400	ECOD (1.6)
Y [auth H]	PF00347	e7oydH2	A: a+b two layers	X: Ribosomal protein L6 (From Topology)	H: Ribosomal protein L6 (From Topology)	T: Ribosomal protein L6	F: PF00347	ECOD (1.6)
GA [auth L]	PF01294	e7oydL1	A: extended segments	X: RPL13 (From Topology)	H: RPL13 (From Topology)	T: RPL13	F: PF01294	ECOD (1.6)
LA [auth O]	PF00572	e7oydO1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal protein L13 and L16-A (From Topology)	T: Ribosomal protein L13 and L16-A	F: PF00572	ECOD (1.6)
NA [auth P]	PF00237	e7oydP1	A: a+b two layers	X: Enolase-N/ribosomal protein	H: Ribosomal protein L22 (From Topology)	T: Ribosomal protein L22	F: PF00237	ECOD (1.6)
UA [auth SS]	PF00416	e7oydSS1	A: alpha arrays	X: HhH/H2TH	H: H2TH (From Topology)	T: H2TH	F: PF00416	ECOD (1.6)
EB [auth XX]	PF00164	e7oydXX1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: PF00164	ECOD (1.6)
HB [auth Z]	PF00467,PF01777	e7oydZ1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: PF00467,PF01777	ECOD (1.6)
IB [auth ZZ]	PF03297	e7oydZZ1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: PF03297	ECOD (1.6)
KB [auth b]	PF01779	e7oydb1	A: extended segments	X: RPL29 (From Topology)	H: RPL29 (From Topology)	T: RPL29	F: PF01779	ECOD (1.6)
MB [auth d]	PF01198	e7oydd1	A: a+b two layers	X: Ribosomal protein L31e-like	H: Ribosomal protein L31e/gp120 outer domain (From Topology)	T: Ribosomal protein L31e/gp120 outer domain	F: PF01198	ECOD (1.6)
OB [auth f]	PF01247	e7oydf1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: PF01247	ECOD (1.6)
QB [auth h]	PF00831	e7oydh1	A: alpha bundles	X: Long alpha-hairpin	H: Ribosomal protein L29 (L29p) (From Topology)	T: Ribosomal protein L29 (L29p)	F: PF00831	ECOD (1.6)
SB [auth j]	PF01907	e7oydj1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: PF01907	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
F [auth AA]	PF00318	Ribosomal protein S2 (Ribosomal_S2)	Ribosomal protein S2	-	Family
F [auth AA]	PF16122	40S ribosomal protein SA C-terminus (40S_SA_C)	40S ribosomal protein SA C-terminus	-	Family
H [auth B]	PF00297	Ribosomal protein L3 (Ribosomal_L3)	Ribosomal protein L3	-	Family
I [auth BB]	PF01015	Ribosomal S3Ae family (Ribosomal_S3Ae)	Ribosomal S3Ae family	-	Family
K [auth C]	PF14374	60S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)	60S ribosomal protein L4 C-terminal domain	This family is found at the very C-terminal of 60 ribosomal L4 proteins.	Domain
K [auth C]	PF00573	Ribosomal protein L4/L1 family (Ribosomal_L4)	Ribosomal protein L4/L1 family	-	Family
N [auth D]	PF17144	Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)	Ribosomal large subunit proteins 60S L5, and 50S L18	-	Family
N [auth D]	PF14204	Ribosomal L18 C-terminal region (Ribosomal_L18_c)	Ribosomal L18 C-terminal region	This domain is the C-terminal end of ribosomal L18/L5 proteins.	Domain
O [auth DD]	PF07650	KH domain (KH_2)	KH domain	-	Domain
O [auth DD]	PF00189	Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)	Ribosomal protein S3, C-terminal domain	This family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.	Domain
P [auth Dd]	PF00253	Ribosomal protein S14p/S29e (Ribosomal_S14)	Ribosomal protein S14p/S29e	-	Family
Q [auth E]	PF03868	Ribosomal protein L6, N-terminal domain (Ribosomal_L6e_N)	Ribosomal protein L6, N-terminal domain	-	Domain
Q [auth E]	PF01159	Ribosomal protein L6e (Ribosomal_L6e)	Ribosomal protein L6e	-	Family
S [auth Ee]	PF04758	Ribosomal protein S30 (Ribosomal_S30)	Ribosomal protein S30	-	Family
T [auth F]	PF08079	Ribosomal L30 N-terminal domain (Ribosomal_L30_N)	Ribosomal L30 N-terminal domain	This presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].	Domain
T [auth F]	PF00327	Ribosomal protein L30p/L7e (Ribosomal_L30)	Ribosomal protein L30p/L7e	This family includes prokaryotic L30 and eukaryotic L7.	Domain
U [auth FF]	PF00177	Ribosomal protein S7p/S5e (Ribosomal_S7)	Ribosomal protein S7p/S5e	This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.	Domain
W [auth GG]	PF01092	Ribosomal protein S6e (Ribosomal_S6e)	Ribosomal protein S6e	-	Family
Z [auth HH]	PF01251	Ribosomal protein S7e (Ribosomal_S7e)	Ribosomal protein S7e	-	Family
AA [auth I]	PF00252	Ribosomal protein L16p/L10e (Ribosomal_L16)	Ribosomal protein L16p/L10e	-	Domain
BA [auth II]	PF01201	Ribosomal protein S8e (Ribosomal_S8e)	Ribosomal protein S8e	-	Family
CA [auth J]	PF00281	Ribosomal protein L5 (Ribosomal_L5)	Ribosomal protein L5	-	Domain
CA [auth J]	PF00673	ribosomal L5P family C-terminus (Ribosomal_L5_C)	ribosomal L5P family C-terminus	This region is found associated with Pfam:PF00281.	Domain
DA [auth JJ]	PF00163	Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)	Ribosomal protein S4/S9 N-terminal domain	-	Family
DA [auth JJ]	PF01479	S4 domain (S4)	S4 domain	The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...	The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.	Domain
FA [auth KK]	PF03501	Plectin/S10 domain (S10_plectin)	Plectin/S10 domain	This presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.	Domain
HA [auth LL]	PF00366	Ribosomal protein S17 (Ribosomal_S17)	Ribosomal protein S17	-	Domain
HA [auth LL]	PF16205	Ribosomal_S17 N-terminal (Ribosomal_S17_N)	Ribosomal_S17 N-terminal	-	Family
IA [auth M]	PF01929	Ribosomal protein L14 (Ribosomal_L14e)	Ribosomal protein L14	-	Family
JA [auth N]	PF00827	Ribosomal L15 (Ribosomal_L15e)	Ribosomal L15	-	Family
KA [auth NN]	PF08069	Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)	Ribosomal S13/S15 N-terminal domain	This domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1].	Domain
KA [auth NN]	PF00312	Ribosomal protein S15 (Ribosomal_S15)	Ribosomal protein S15	-	Domain
OA [auth PP]	PF00203	Ribosomal protein S19 (Ribosomal_S19)	Ribosomal protein S19	-	Domain
QA [auth QQ]	PF00380	Ribosomal protein S9/S16 (Ribosomal_S9)	Ribosomal protein S9/S16	-	Family
RA [auth R]	PF01280	Ribosomal protein L19e (Ribosomal_L19e)	Ribosomal protein L19e	-	Family
SA [auth RR]	PF00833	Ribosomal S17 (Ribosomal_S17e)	Ribosomal S17	-	Family
VA [auth T]	PF01157	Ribosomal protein L21e (Ribosomal_L21e)	Ribosomal protein L21e	-	Family
WA [auth TT]	PF01090	Ribosomal protein S19e (Ribosomal_S19e)	Ribosomal protein S19e	-	Family
YA [auth UU]	PF00338	Ribosomal protein S10p/S20e (Ribosomal_S10)	Ribosomal protein S10p/S20e	This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.	Domain
ZA [auth V]	PF00238	Ribosomal protein L14p/L23e (Ribosomal_L14)	Ribosomal protein L14p/L23e	-	Domain
BB [auth W]	PF01246	Ribosomal protein L24e (Ribosomal_L24e)	Ribosomal protein L24e	-	Domain
CB [auth WW]	PF00410	Ribosomal protein S8 (Ribosomal_S8)	Ribosomal protein S8	-	Domain
FB [auth Y]	PF16906	Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)	Ribosomal proteins L26 eukaryotic, L24P archaeal	-	Family
FB [auth Y]	PF00467	KOW motif (KOW)	KOW motif	-	Family
GB [auth YY]	PF01282	Ribosomal protein S24e (Ribosomal_S24e)	Ribosomal protein S24e	-	Family
JB [auth a]	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A	-	Family
LB [auth c]	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].	Domain
NB [auth e]	PF01655	Ribosomal protein L32 (Ribosomal_L32e)	Ribosomal protein L32	-	Family
PB [auth g]	PF01199	Ribosomal protein L34e (Ribosomal_L34e)	Ribosomal protein L34e	-	Family
RB [auth i]	PF01158	Ribosomal protein L36e (Ribosomal_L36e)	Ribosomal protein L36e	-	Family
TB [auth k]	PF01781	Ribosomal L38e protein family (Ribosomal_L38e)	Ribosomal L38e protein family	-	Family
UB [auth l]	PF00832	Ribosomal L39 protein (Ribosomal_L39)	Ribosomal L39 protein	-	Family
WB [auth n]	PF05162	Ribosomal protein L41 (Ribosomal_L41)	Ribosomal protein L41	-	Family
XB [auth o]	PF00935	Ribosomal protein L44 (Ribosomal_L44)	Ribosomal protein L44	-	Family
YB [auth p]	PF01780	Ribosomal L37ae protein family (Ribosomal_L37ae)	Ribosomal L37ae protein family	-	Family
ZB [auth r]	PF01778	Ribosomal L28e protein family (Ribosomal_L28e)	Ribosomal L28e protein family	-	Family
BC [auth s1]	PF15228	Death-associated protein (DAP)	Death-associated protein	-	Family
CC [auth t]	PF21485	Translation initiation factor 5A-like, N-terminal (IF5A-like_N)	Translation initiation factor 5A-like, N-terminal	This is the N-terminal domain of Translation initiation factor 5A from eukaryotes and archaea, which has a SH2-like fold. These proteins are involved in translation elongation and eIF5A is specifically required to promote peptide-bond formation betwe ...	This is the N-terminal domain of Translation initiation factor 5A from eukaryotes and archaea, which has a SH2-like fold. These proteins are involved in translation elongation and eIF5A is specifically required to promote peptide-bond formation between consecutive proline residues [1-5]. This entry also includes Woronin body major protein Hex1, which is similar to eIF5A.	Domain
CC [auth t]	PF01287	Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold (eIF-5a)	Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold	eIF5A, previously thought to be an initiation factor, has been shown to be required for peptide chain elongation in yeast [1].	Domain
EC [auth w]	PF04774	Hyaluronan / mRNA binding family (HABP4_PAI-RBP1)	Hyaluronan / mRNA binding family	-	Family
A [auth x]	PF00687	Ribosomal protein L1p/L10e family (Ribosomal_L1)	Ribosomal protein L1p/L10e family	This family includes prokaryotic L1 and eukaryotic L10.	Domain
J [auth Bb]	PF01667	Ribosomal protein S27 (Ribosomal_S27e)	Ribosomal protein S27	-	Family
M [auth Cc]	PF01200	Ribosomal protein S28e (Ribosomal_S28e)	Ribosomal protein S28e	-	Family
R [auth EE]	PF00900	Ribosomal family S4e (Ribosomal_S4e)	Ribosomal family S4e	-	Family
R [auth EE]	PF16121	40S ribosomal protein S4 C-terminus (40S_S4_C)	40S ribosomal protein S4 C-terminus	-	Family
R [auth EE]	PF08071	RS4NT (NUC023) domain (RS4NT)	RS4NT (NUC023) domain	This is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].	Domain
R [auth EE]	PF00467	KOW motif (KOW)	KOW motif	-	Family
X [auth Gg]	PF00400	WD domain, G-beta repeat (WD40)	WD domain, G-beta repeat	-	Repeat
Y [auth H]	PF00347	Ribosomal protein L6 (Ribosomal_L6)	Ribosomal protein L6	-	Domain
GA [auth L]	PF01294	Ribosomal protein L13e (Ribosomal_L13e)	Ribosomal protein L13e	-	Family
NA [auth P]	PF00237	Ribosomal protein L22p/L17e (Ribosomal_L22)	Ribosomal protein L22p/L17e	This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.	Domain
UA [auth SS]	PF00416	Ribosomal protein S13/S18 (Ribosomal_S13)	Ribosomal protein S13/S18	-	Family
EB [auth XX]	PF00164	Ribosomal protein S12/S23 (Ribosom_S12_S23)	Ribosomal protein S12/S23	-	Family
HB [auth Z]	PF01777	Ribosomal L27e protein family (Ribosomal_L27e)	Ribosomal L27e protein family	-	Family
HB [auth Z]	PF00467	KOW motif (KOW)	KOW motif	-	Family
IB [auth ZZ]	PF03297	S25 ribosomal protein (Ribosomal_S25)	S25 ribosomal protein	-	Family
KB [auth b]	PF01779	Ribosomal L29e protein family (Ribosomal_L29e)	Ribosomal L29e protein family	-	Family
MB [auth d]	PF01198	Ribosomal protein L31e (Ribosomal_L31e)	Ribosomal protein L31e	-	Family
OB [auth f]	PF01247	Ribosomal protein L35Ae (Ribosomal_L35Ae)	Ribosomal protein L35Ae	-	Domain
QB [auth h]	PF00831	Ribosomal L29 protein (Ribosomal_L29)	Ribosomal L29 protein	-	Family
SB [auth j]	PF01907	Ribosomal protein L37e (Ribosomal_L37e)	Ribosomal protein L37e	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth 5]	28S rRNA	-	-	-
D [auth 9]	18S rRNA	-	-	-
E [auth A]	60S ribosomal protein L8	-	-	-
F [auth AA]	40S ribosomal protein SA	-	-	-
G [auth Aa]	40S ribosomal protein S26-like	-	-	-
H [auth B]	Ribosomal protein L3	-	-	-
I [auth BB]	40S ribosomal protein S3a	-	-	-
K [auth C]	60S ribosomal protein L4	-	-	-
L [auth CC]	40S ribosomal protein S2	-	-	-
N [auth D]	60S ribosomal protein L5	-	-	-
O [auth DD]	Ribosomal protein S3	-	-	-
P [auth Dd]	40S ribosomal protein S29	-	-	-
Q [auth E]	60S ribosomal protein L6	-	-	-
S [auth Ee]	40S ribosomal protein S30	-	-	-
T [auth F]	60S ribosomal protein L7	-	-	-
U [auth FF]	Ribosomal protein S5	-	-	-
V [auth G]	60S ribosomal protein L7a	-	-	-
W [auth GG]	40S ribosomal protein S6	-	-	-
Z [auth HH]	40S ribosomal protein S7	-	-	-
AA [auth I]	60S ribosomal protein L10	-	-	-
BA [auth II]	40S ribosomal protein S8	-	-	-
CA [auth J]	60S ribosomal protein L11	-	-	-
DA [auth JJ]	40S ribosomal protein S9	-	-	-
EA [auth K]	5S rRNA	-	-	-
FA [auth KK]	S10_plectin domain-containing protein	-	-	-
HA [auth LL]	40S ribosomal protein S11	-	-	-
IA [auth M]	60S ribosomal protein L14	-	-	-
JA [auth N]	Ribosomal protein L15	-	-	-
KA [auth NN]	40S ribosomal protein S13	-	-	-
MA [auth OO]	40S ribosomal protein S14-like	-	-	-
OA [auth PP]	40S ribosomal protein uS19	-	-	-
PA [auth Q]	Ribosomal protein L18	-	-	-
QA [auth QQ]	Ribosomal protein S16	-	-	-
RA [auth R]	Ribosomal protein L19	-	-	-
SA [auth RR]	40S ribosomal protein eS17	-	-	-
TA [auth S]	60S ribosomal protein L18a	-	-	-
VA [auth T]	60S ribosomal protein L21	-	-	-
WA [auth TT]	40S ribosomal protein S19	-	-	-
XA [auth U]	60S ribosomal protein L22-like	-	-	-
YA [auth UU]	40S ribosomal protein uS10	-	-	-
ZA [auth V]	Ribosomal protein L23	-	-	-
AB [auth VV]	40S ribosomal protein S21	-	-	-
BB [auth W]	Ribosomal protein L24	-	-	-
CB [auth WW]	Ribosomal protein S15a	-	-	-
DB [auth X]	60S ribosomal protein L23a	-	-	-
FB [auth Y]	Ribosomal protein L26	-	-	-
GB [auth YY]	40S ribosomal protein S24	-	-	-
JB [auth a]	60S ribosomal protein L27a	-	-	-
LB [auth c]	60S ribosomal protein L30	-	-	-
NB [auth e]	60S ribosomal protein L32	-	-	-
PB [auth g]	60S ribosomal protein L34	-	-	-
RB [auth i]	60S ribosomal protein L36	-	-	-
TB [auth k]	60S ribosomal protein L38	-	-	-
UB [auth l]	60S ribosomal protein L39-like	structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex ribonucleoprotein complex intracellular organelle intracellular anatomical structure organelle intracellular non-membrane-bounded organelle ribosome cellular anatomical entity non-membrane-bounded organelle
VB [auth m]	Ubiquitin-60S ribosomal protein L40	-	-	-
WB [auth n]	60s ribosomal protein l41	-	-	-
XB [auth o]	60S ribosomal protein L36a-like	-	-	-
YB [auth p]	60S ribosomal protein L37a	-	-	-
ZB [auth r]	60S ribosomal protein L28	-	-	-
AC [auth s]	60S ribosomal protein L10E	-	-	-
BC [auth s1]	Dap1b	protein binding binding translation initiation factor binding translation regulator activity translation repressor activity death domain binding protein domain specific binding ribonucleoprotein complex binding protein-containing complex binding ribosome binding	cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation cell death cell communication apoptotic signaling pathway cellular process signal transduction apoptotic process programmed cell death response to nutrient levels cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation cell death cell communication apoptotic signaling pathway cellular process signal transduction apoptotic process programmed cell death response to nutrient levels cellular response to amino acid starvation cellular response to starvation cellular response to nutrient levels cellular response to stress response to stress response to amino acid starvation response to starvation cellular biosynthetic process organonitrogen compound biosynthetic process negative regulation of biological process negative regulation of cellular metabolic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation organic substance metabolic process organic substance biosynthetic process negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process ribosome hibernation organonitrogen compound metabolic process cellular metabolic process regulation of protein metabolic process negative regulation of metabolic process regulation of cellular metabolic process primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process negative regulation of cellular biosynthetic process regulation of cellular biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process regulation of translation negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process metabolic process macromolecule metabolic process regulation of metabolic process negative regulation of cellular catabolic process negative regulation of catabolic process catabolic process autophagy regulation of catabolic process regulation of autophagy cellular catabolic process negative regulation of autophagy regulation of cellular catabolic process process utilizing autophagic mechanism	-
CC [auth t]	Eukaryotic translation initiation factor 5A-1	translation regulator activity binding organic cyclic compound binding translation regulator activity, nucleic acid binding translation elongation factor activity nucleic acid binding translation factor activity, RNA binding ribonucleoprotein complex binding protein-containing complex binding ribosome binding RNA binding	regulation of cellular process cellular biosynthetic process positive regulation of protein metabolic process organonitrogen compound biosynthetic process positive regulation of biological process positive regulation of translation positive regulation of cellular metabolic process positive regulation of macromolecule biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression positive regulation of metabolic process organic substance metabolic process positive regulation of biosynthetic process organic substance biosynthetic process regulation of cellular process cellular biosynthetic process positive regulation of protein metabolic process organonitrogen compound biosynthetic process positive regulation of biological process positive regulation of translation positive regulation of cellular metabolic process positive regulation of macromolecule biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression positive regulation of metabolic process organic substance metabolic process positive regulation of biosynthetic process organic substance biosynthetic process positive regulation of macromolecule metabolic process protein metabolic process positive regulation of cellular process regulation of biosynthetic process regulation of biological process organonitrogen compound metabolic process cellular metabolic process regulation of protein metabolic process biological regulation regulation of cellular metabolic process primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process regulation of cellular biosynthetic process regulation of gene expression biosynthetic process positive regulation of gene expression regulation of translation regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process positive regulation of cellular biosynthetic process regulation of translational elongation positive regulation of translational elongation translational elongation protein-containing complex disassembly regulation of protein-containing complex disassembly translational termination cellular component disassembly regulation of translational termination positive regulation of translational termination regulation of cellular component organization positive regulation of cellular component organization cellular component organization cellular component organization or biogenesis positive regulation of protein-containing complex disassembly protein-containing complex organization	membrane-bounded organelle intracellular organelle intracellular anatomical structure organelle nucleus intracellular membrane-bounded organelle cellular anatomical entity organelle subcompartment membrane endomembrane system endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasm membrane-bounded organelle intracellular organelle intracellular anatomical structure organelle nucleus intracellular membrane-bounded organelle cellular anatomical entity organelle subcompartment membrane endomembrane system endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasm organelle membrane endoplasmic reticulum membrane
DC [auth v]	Elongation factor 2	-	-	-
EC [auth w]	SERPINE1 mRNA binding protein 1	ribonucleoprotein complex binding protein-containing complex binding binding ribosome binding SUMO binding protein binding ubiquitin-like protein binding mRNA 3'-UTR binding RNA binding organic cyclic compound binding nucleic acid binding mRNA binding translation regulator activity translation repressor activity ribonucleoprotein complex binding protein-containing complex binding binding ribosome binding SUMO binding protein binding ubiquitin-like protein binding mRNA 3'-UTR binding RNA binding organic cyclic compound binding nucleic acid binding mRNA binding translation regulator activity translation repressor activity translation elongation factor binding	cellular component organization nuclear body organization nucleus organization organelle organization cellular process PML body organization cellular component organization or biogenesis regulation of cellular process cellular biosynthetic process organonitrogen compound biosynthetic process negative regulation of biological process negative regulation of cellular metabolic process regulation of primary metabolic process post-transcriptional regulation of gene expression cellular component organization nuclear body organization nucleus organization organelle organization cellular process PML body organization cellular component organization or biogenesis regulation of cellular process cellular biosynthetic process organonitrogen compound biosynthetic process negative regulation of biological process negative regulation of cellular metabolic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation organic substance metabolic process organic substance biosynthetic process negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process organonitrogen compound metabolic process cellular metabolic process regulation of protein metabolic process negative regulation of metabolic process biological regulation regulation of cellular metabolic process primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process negative regulation of cellular biosynthetic process regulation of cellular biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process regulation of translation negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process metabolic process macromolecule metabolic process regulation of metabolic process ribosome hibernation	intracellular anatomical structure cytoplasm cellular anatomical entity cytosol membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle
A [auth x]	Ribosomal protein uL1	-	-	-
J [auth Bb]	40S ribosomal protein S27	-	-	-
M [auth Cc]	40S ribosomal protein S28	-	-	-
R [auth EE]	40S ribosomal protein S4	-	-	-
X [auth Gg]	RACK1	-	-	-
Y [auth H]	60S ribosomal protein L9	-	-	-
C [auth 8]	5.8S rRNA	-	-	-
GA [auth L]	60S ribosomal protein L13	-	-	-
LA [auth O]	60S ribosomal protein L13a	-	-	-
NA [auth P]	60S ribosomal protein L17	-	-	-
UA [auth SS]	40S ribosomal protein uS13	-	-	-
EB [auth XX]	40S ribosomal protein S23	-	-	-
HB [auth Z]	60S ribosomal protein L27	-	-	-
IB [auth ZZ]	40S ribosomal protein S25	-	-	-
KB [auth b]	60S ribosomal protein L29	-	-	-
MB [auth d]	60S ribosomal protein L31	-	-	-
OB [auth f]	60S ribosomal protein L35a	-	-	-
QB [auth h]	60S ribosomal protein L35	-	-	-
SB [auth j]	Ribosomal protein L37	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
FA [auth KK]	IPR037447	Small ribosomal subunit protein eS10	Family
FA [auth KK]	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
FA [auth KK]	IPR005326	Plectin/eS10, N-terminal	Domain
UB [auth l]	IPR023626	Large ribosomal subunit protein eL39 domain superfamily	Homologous Superfamily
UB [auth l]	IPR000077	Large ribosomal subunit protein eL39	Family
UB [auth l]	IPR020083	Large ribosomal subunit protein eL39, conserved site	Conserved Site
BC [auth s1]	IPR024130	DAP1/DAPL1	Family
CC [auth t]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
CC [auth t]	IPR020189	Translation elongation factor, IF5A C-terminal	Domain
CC [auth t]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
CC [auth t]	IPR019769	Translation elongation factor, IF5A, hypusine site	PTM
CC [auth t]	IPR001884	Translation elongation factor IF5A-like	Family
CC [auth t]	IPR048670	Translation initiation factor 5A-like, N-terminal	Domain
CC [auth t]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
EC [auth w]	IPR039764	RNA binding protein HABP4/SERBP1-like	Family
EC [auth w]	IPR006861	Hyaluronan/mRNA-binding protein	Domain
EC [auth w]	IPR032381	Intracellular hyaluronan-binding protein 4, N-terminal domain	Domain

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
B [auth 5]	1MA	Parent Component: A
B [auth 5]	2MG	Parent Component: G
B [auth 5]	5MC	Parent Component: C
B [auth 5]	5MU	Parent Component: U
B [auth 5]	6MZ	Parent Component: A
B [auth 5]	7MG	Parent Component: G
B [auth 5]	A2M	Parent Component: A
B [auth 5]	B8H	Parent Component: U
B [auth 5]	B8K	Parent Component: G
B [auth 5]	B8Q	Parent Component: C
B [auth 5]	B8T	Parent Component: C
B [auth 5]	B8W	Parent Component: G
B [auth 5]	B9B	Parent Component: G
B [auth 5]	B9H	Parent Component: C
B [auth 5]	BGH	Parent Component: G
B [auth 5]	E6G	Parent Component: G
B [auth 5]	E7G	Parent Component: G
B [auth 5]	I4U	Parent Component: U
B [auth 5]	M7A	Parent Component: A
B [auth 5]	MHG	Parent Component: G
B [auth 5]	OMC	Parent Component: C
B [auth 5]	OMG	Parent Component: G
B [auth 5]	OMU	Parent Component: U
B [auth 5]	P4U	Parent Component: U
B [auth 5]	P7G	Parent Component: G
B [auth 5]	PSU	Parent Component: U
B [auth 5]	UR3	Parent Component: U
D [auth 9]	4AC
D [auth 9]	5MC	Parent Component: C
D [auth 9]	5MU	Parent Component: U
D [auth 9]	6MZ	Parent Component: A
D [auth 9]	A2M	Parent Component: A
D [auth 9]	B8N
D [auth 9]	B8Q	Parent Component: C
D [auth 9]	E3C	Parent Component: C
D [auth 9]	M7A	Parent Component: A
D [auth 9]	MA6	Parent Component: A
D [auth 9]	OMC	Parent Component: C
D [auth 9]	OMG	Parent Component: G
D [auth 9]	OMU	Parent Component: U
D [auth 9]	PSU	Parent Component: U
D [auth 9]	UR3	Parent Component: U
K [auth C]	MLZ	Parent Component: LYS RESID: AA0076 PSI-MOD : N6-methyl-L-lysine MOD:00085
VB [auth m]	MLZ	Parent Component: LYS RESID: AA0076 , AA0076 PSI-MOD : N6-methyl-L-lysine MOD:00085 , N6-methyl-L-lysine MOD:00085
CC [auth t]	5CT	Parent Component: LYS RESID: AA0076 , AA0076
DC [auth v]	DDE	Parent Component: HIS RESID: AA0076 , AA0076 , AA0040 PSI-MOD : N6-methyl-L-lysine MOD:00085 , N6-methyl-L-lysine MOD:00085 , 2'-[3-carboxamido-3-(trimethylammonio)propyl]-L-histidine MOD:00049
C [auth 8]	OMU	Parent Component: U RESID: AA0076 , AA0076 , AA0040