7OVQ | pdb_00007ovq

Immature HIV-1 matrix structure


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
X [auth m]Trypsine7ovqm1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (develop294)
W [auth O]Trypsine7ovqO1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (develop294)
V [auth l]Trypsine7ovql1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (develop294)
U [auth Z]Trypsine7ovqZ1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (develop294)
T [auth Y]Trypsine7ovqY1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (develop294)
S [auth M]Trypsine7ovqM1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (develop294)
R [auth X]Trypsine7ovqX1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (develop294)
Q [auth K]Trypsine7ovqK1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (develop294)
P [auth h]Trypsine7ovqh1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (develop294)
O [auth I]Trypsine7ovqI1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (develop294)
N [auth f]Trypsine7ovqf1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (develop294)
M [auth S]Trypsine7ovqS1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (develop294)
L [auth d]Trypsine7ovqd1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (develop294)
K [auth R]Trypsine7ovqR1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (develop294)
J [auth F]Trypsine7ovqF1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (develop294)
I [auth c]Trypsine7ovqc1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (develop294)
H [auth Q]Trypsine7ovqQ1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (develop294)
G [auth E]Trypsine7ovqE1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (develop294)
F [auth b]Trypsine7ovqb1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (develop294)
E [auth P]Trypsine7ovqP1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (develop294)
DTrypsine7ovqD1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (develop294)
CTrypsine7ovqC1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (develop294)
BTrypsine7ovqB1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (develop294)
ALyase_8_Ce7ovqA1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Lyase_8_CECOD (develop294)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR000071Immunodeficiency lentiviral matrix, N-terminalDomain
IPR045345Retroviral nucleocapsid Gag protein p24, C-terminal domainDomain
IPR036875Zinc finger, CCHC-type superfamilyHomologous Superfamily
IPR050195Primate lentivirus group Gag polyprotein-likeDomain
IPR001878Zinc finger, CCHC-typeDomain
IPR008919Retrovirus capsid, N-terminalHomologous Superfamily
IPR010999Retroviral matrix proteinHomologous Superfamily
IPR012344Matrix protein, lentiviral and alpha-retroviral, N-terminalHomologous Superfamily
IPR014817Gag protein p6Domain
IPR008916Retrovirus capsid, C-terminalHomologous Superfamily