Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
E [auth P]PF00540e7ovqP1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
R [auth X]PF00540e7ovqX1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
APF00540e7ovqA1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
BPF00540e7ovqB1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
CPF00540e7ovqC1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
DPF00540e7ovqD1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
F [auth b]PF00540e7ovqb1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
G [auth E]PF00540e7ovqE1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
H [auth Q]PF00540e7ovqQ1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
I [auth c]PF00540e7ovqc1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
J [auth F]PF00540e7ovqF1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
K [auth R]PF00540e7ovqR1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
L [auth d]PF00540e7ovqd1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
M [auth S]PF00540e7ovqS1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
N [auth f]PF00540e7ovqf1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
O [auth I]PF00540e7ovqI1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
P [auth h]PF00540e7ovqh1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
Q [auth K]PF00540e7ovqK1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
S [auth M]PF00540e7ovqM1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
T [auth Y]PF00540e7ovqY1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
U [auth Z]PF00540e7ovqZ1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
V [auth l]PF00540e7ovql1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
W [auth O]PF00540e7ovqO1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)
X [auth m]PF00540e7ovqm1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: PF00540ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00540gag gene protein p17 (matrix protein) (Gag_p17)gag gene protein p17 (matrix protein)The matrix protein forms an icosahedral shell associated with the inner membrane of the mature immunodeficiency virus.Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR000071Immunodeficiency lentiviral matrix, N-terminalDomain
IPR045345Retroviral nucleocapsid Gag protein p24, C-terminal domainDomain
IPR036875Zinc finger, CCHC-type superfamilyHomologous Superfamily
IPR001878Zinc finger, CCHC-typeDomain
IPR008919Retrovirus capsid, N-terminalHomologous Superfamily
IPR010999Retroviral matrix proteinHomologous Superfamily
IPR012344Matrix protein, lentiviral and alpha-retroviral, N-terminalHomologous Superfamily
IPR014817Gag protein p6Domain
IPR008916Retrovirus capsid, C-terminalHomologous Superfamily