7OU8 | pdb_00007ou8

Human O-GlcNAc hydrolase in complex with DNJNAc-thiazolidines

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B [auth BBB]	SCOP2B Superfamily	(Trans)glycosidases	8037813	3000313	SCOP2B (2022-06-29)
B [auth BBB]	SCOP2B Superfamily	Hyaluronidase post-catalytic domain-like	8037810	3001475	SCOP2B (2022-06-29)
B [auth BBB]	SCOP2B Superfamily	beta-N-acetylhexosaminidase-like domain	8037815	3000192	SCOP2B (2022-06-29)
A [auth AAA]	SCOP2B Superfamily	Hyaluronidase post-catalytic domain-like	8037810	3001475	SCOP2B (2022-06-29)
A [auth AAA]	SCOP2B Superfamily	beta-N-acetylhexosaminidase-like domain	8037815	3000192	SCOP2B (2022-06-29)
A [auth AAA]	SCOP2B Superfamily	(Trans)glycosidases	8037813	3000313	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B [auth BBB]	F5_F8_type_C_like_1	e7ou8BBB3	A: beta sandwiches	X: jelly-roll	H: Concanavalin A-like	T: Galactose-binding domain-like	F: F5_F8_type_C_like_1	ECOD (1.6)
B [auth BBB]	Glyco_hydro_84_helical	e7ou8BBB2	A: alpha bundles	X: Hyaluronidase domain-like	H: Hyaluronidase post-catalytic domain-like (From Topology)	T: Hyaluronidase post-catalytic domain-like	F: Glyco_hydro_84_helical	ECOD (1.6)
B [auth BBB]	NAGidase	e7ou8BBB1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: NAGidase	ECOD (1.6)
B [auth BBB]	Glyco_hydro_20b	e7ou8BBB4	A: mixed a+b and a/b	X: Zincin-like	H: beta-N-acetylhexosaminidase-like domain (From Topology)	T: beta-N-acetylhexosaminidase-like domain	F: Glyco_hydro_20b	ECOD (1.6)
A [auth AAA]	F5_F8_type_C_like_1	e7ou8AAA2	A: beta sandwiches	X: jelly-roll	H: Concanavalin A-like	T: Galactose-binding domain-like	F: F5_F8_type_C_like_1	ECOD (1.6)
A [auth AAA]	Glyco_hydro_84_helical	e7ou8AAA3	A: alpha bundles	X: Hyaluronidase domain-like	H: Hyaluronidase post-catalytic domain-like (From Topology)	T: Hyaluronidase post-catalytic domain-like	F: Glyco_hydro_84_helical	ECOD (1.6)
A [auth AAA]	NAGidase	e7ou8AAA1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: NAGidase	ECOD (1.6)
A [auth AAA]	Glyco_hydro_20b	e7ou8AAA4	A: mixed a+b and a/b	X: Zincin-like	H: beta-N-acetylhexosaminidase-like domain (From Topology)	T: beta-N-acetylhexosaminidase-like domain	F: Glyco_hydro_20b	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth AAA], B [auth BBB]	PF21809	Bacterial GH84, post-catalytic domain (Glyco_hydro_84_hel)	Bacterial GH84, post-catalytic domain	This is a helical domain found after the catalytic domain of enzymes from the Glycoside hydrolase family 84 from Bacteroides spp. and certain pathogenic Clostridia spp [1-5].	Domain
A [auth AAA], B [auth BBB]	PF18344	Carbohydrate binding module family 32 (CBM32)	Carbohydrate binding module family 32	This domain is found in GH84C present in Clostridium perfringens. GH84C is a beta-N-acetylglucosaminidase. This domain is a family 32 carbohydrate binding module (CBM) which preferentially recognizes the non-reducing terminus of N-acetyllactosamine [ ...	This domain is found in GH84C present in Clostridium perfringens. GH84C is a beta-N-acetylglucosaminidase. This domain is a family 32 carbohydrate binding module (CBM) which preferentially recognizes the non-reducing terminus of N-acetyllactosamine [1].	Domain
A [auth AAA], B [auth BBB]	PF07555	beta-N-acetylglucosaminidase (NAGidase)	beta-N-acetylglucosaminidase	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth AAA], B [auth BBB]	O-GlcNAcase BT_4395	hydrolase activity, acting on glycosyl bonds hexosaminidase activity beta-N-acetylhexosaminidase activity beta-N-acetylglucosaminidase activity hydrolase activity, hydrolyzing O-glycosyl compounds hydrolase activity catalytic activity [protein]-3-O-(N-acetyl-D-glucosaminyl)-L-serine/L-threonine O-N-acetyl-alpha-D-glucosaminase activity catalytic activity, acting on a protein identical protein binding protein binding binding	carbohydrate metabolic process primary metabolic process metabolic process cellular process macromolecule modification protein deglycosylation carbohydrate derivative metabolic process protein metabolic process macromolecule metabolic process protein modification process glycoprotein metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth AAA], B [auth BBB]	IPR051822	Glycosyl Hydrolase Family 84	Family
A [auth AAA], B [auth BBB]	IPR017853	Glycoside hydrolase superfamily	Homologous Superfamily
A [auth AAA], B [auth BBB]	IPR029018	Beta-hexosaminidase-like, domain 2	Homologous Superfamily
A [auth AAA], B [auth BBB]	IPR049478	O-GlcNAcase BT_4395-like, post-catalytic domain	Domain
A [auth AAA], B [auth BBB]	IPR011496	Beta-N-acetylglucosaminidase, catalytic domain	Domain
A [auth AAA], B [auth BBB]	IPR048162	O-GlcNAcase BT_4395-like	Family
A [auth AAA], B [auth BBB]	IPR013780	Glycosyl hydrolase, all-beta	Homologous Superfamily
A [auth AAA], B [auth BBB]	IPR015882	Beta-hexosaminidase, bacterial type, N-terminal	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.