7OSM | pdb_00007osm

Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
MB [auth eS19]	SCOP2 Family	Rps19E-like	8105651	4000222	SCOP2 (2022-06-29)
MB [auth eS19]	SCOP2 Superfamily	Winged helix DNA-binding domain	8105652	3000034	SCOP2 (2022-06-29)
HB [auth uS11]	SCOP2 Family	Ribosomal protein L18p and S11	8105641	4000555	SCOP2 (2022-06-29)
HB [auth uS11]	SCOP2 Superfamily	Translational machinery components	8105642	3000571	SCOP2 (2022-06-29)
ZA [auth uS7]	SCOP2B Superfamily	Ribosomal protein S7	8065999	3000799	SCOP2B (2022-06-29)
SA [auth eL43]	SCOP2B Superfamily	Zn-binding ribosomal proteins	8103126	3001320	SCOP2B (2022-06-29)
OA [auth eL39]	SCOP2 Family	ribosomal protein l39e	8105645	4001518	SCOP2 (2022-06-29)
OA [auth eL39]	SCOP2 Superfamily	Ribosomal protein L39e	8105646	3001756	SCOP2 (2022-06-29)
LA [auth eL36]	SCOP2B Superfamily	Ribosomal protein L36e	8053115	3002161	SCOP2B (2022-06-29)
HA [auth eL32]	SCOP2 Family	Ribosomal protein L32e	8105667	4003517	SCOP2 (2022-06-29)
HA [auth eL32]	SCOP2 Superfamily	Ribosomal protein L32e	8105668	3000982	SCOP2 (2022-06-29)
BA [auth uL24]	SCOP2B Superfamily	Translation proteins SH3-like KOW motif containing domain	8076760	3000334	SCOP2B (2022-06-29)
U [auth eL19]	SCOP2B Superfamily	Ribosomal protein L19 (L19e)	8077485	3000890	SCOP2B (2022-06-29)
Q [auth eL15]	SCOP2B Superfamily	Ribosomal proteins S24e, L23 and L15e	8082481	3000210	SCOP2B (2022-06-29)
K [auth eL8]	SCOP2B Superfamily	L30e-like	8063962	3001739	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
PA [auth eL40]	Pup_ligase	e7osmeL401	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
ZB [auth eS31]	Pup_ligase	e7osmeS311	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
I [auth eL6]	Pup_ligase	e7osmeL61	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
EC [auth uL11]	SBP_bac_1	e7osmuL111	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SBP_bac_1	ECOD (v294.2)
H [auth uL18]	SBP_bac_1	e7osmuL181	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SBP_bac_1	ECOD (v294.2)
AC [auth eEF2]	Pup_ligase	e7osmeEF21	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
YB [auth RACK]	Pup_ligase	e7osmRACK1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
XB [auth eS30]	Pup_ligase	e7osmeS301	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
WB [auth uS14]	Pup_ligase	e7osmuS141	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
VB [auth eS28]	Pup_ligase	e7osmeS281	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
UB [auth eS27]	SBP_bac_1	e7osmeS271	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SBP_bac_1	ECOD (v294.2)
TB [auth eS26]	Pup_ligase	e7osmeS261	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
SB [auth eS25]	Pup_ligase	e7osmeS251	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
RB [auth eS24]	SBP_bac_1	e7osmeS241	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SBP_bac_1	ECOD (v294.2)
G [auth uL4]	SBP_bac_1	e7osmuL41	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SBP_bac_1	ECOD (v294.2)
QB [auth uS12]	SBP_bac_1	e7osmuS121	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SBP_bac_1	ECOD (v294.2)
PB [auth uS8]	Pup_ligase	e7osmuS81	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
OB [auth eS21]	Pup_ligase	e7osmeS211	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
MB [auth eS19]	Pup_ligase	e7osmeS191	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
LB [auth uS13]	Pup_ligase	e7osmuS131	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
KB [auth eS17]	Pup_ligase	e7osmeS171	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
JB [auth uS9]	Pup_ligase	e7osmuS91	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
IB [auth uS19]	SBP_bac_1	e7osmuS191	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SBP_bac_1	ECOD (v294.2)
HB [auth uS11]	Pup_ligase	e7osmuS111	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
F [auth uL3]	Pup_ligase	e7osmuL31	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
GB [auth uS15]	Pup_ligase	e7osmuS151	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
FB [auth uS17]	Ion_trans	e7osmuS171	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ion_trans	ECOD (v294.2)
EB [auth eS10]	Ion_trans	e7osmeS101	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ion_trans	ECOD (v294.2)
DB [auth uS4]	Pup_ligase	e7osmuS41	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
CB [auth eS8]	Pup_ligase	e7osmeS81	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
BB [auth eS7]	Pup_ligase	e7osmeS71	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
AB [auth eS6]	Pup_ligase	e7osmeS61	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
ZA [auth uS7]	Pup_ligase	e7osmuS71	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
YA [auth eS4]	SBP_bac_1	e7osmeS41	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SBP_bac_1	ECOD (v294.2)
XA [auth uS3]	Pup_ligase	e7osmuS31	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
E [auth uL2]	Pup_ligase	e7osmuL21	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
WA [auth uS5]	SBP_bac_1	e7osmuS51	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SBP_bac_1	ECOD (v294.2)
VA [auth eS1]	Pup_ligase	e7osmeS11	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
UA [auth uS2]	Pup_ligase	e7osmuS21	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
SA [auth eL43]	Pup_ligase	e7osmeL431	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
RA [auth eL42]	Pup_ligase	e7osmeL421	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
QA [auth eL41]	Pup_ligase	e7osmeL411	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
OA [auth eL39]	Pup_ligase	e7osmeL391	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
NA [auth eL38]	Pup_ligase	e7osmeL381	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
D [auth uL10]	Pup_ligase	e7osmuL101	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
MA [auth eL37]	Pup_ligase	e7osmeL371	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
LA [auth eL36]	Pup_ligase	e7osmeL361	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
KA [auth uL29]	SBP_bac_1	e7osmuL291	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SBP_bac_1	ECOD (v294.2)
JA [auth eL34]	Pup_ligase	e7osmeL341	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
IA [auth eL33]	Pup_ligase	e7osmeL331	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
HA [auth eL32]	Pup_ligase	e7osmeL321	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
GA [auth eL31]	Pup_ligase	e7osmeL311	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
FA [auth eL30]	Pup_ligase	e7osmeL301	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
EA [auth eL29]	Pup_ligase	e7osmeL291	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
DA [auth uL15]	Pup_ligase	e7osmuL151	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
CA [auth eL27]	Pup_ligase	e7osmeL271	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
BA [auth uL24]	Pup_ligase	e7osmuL241	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
AA [auth uL23]	SBP_bac_1	e7osmuL231	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SBP_bac_1	ECOD (v294.2)
Z [auth eL24]	Pup_ligase	e7osmeL241	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
Y [auth uL14]	Pup_ligase	e7osmuL141	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
X [auth eL22]	Pup_ligase	e7osmeL221	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
W [auth eL21]	SBP_bac_1	e7osmeL211	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SBP_bac_1	ECOD (v294.2)
V [auth eL20]	SBP_bac_1	e7osmeL201	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SBP_bac_1	ECOD (v294.2)
U [auth eL19]	Pup_ligase	e7osmeL191	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
T [auth eL18]	Pup_ligase	e7osmeL181	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
S [auth uL22]	Pup_ligase	e7osmuL221	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
R [auth uL13]	Pup_ligase	e7osmuL131	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
Q [auth eL15]	Pup_ligase	e7osmeL151	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
P [auth eL14]	Pup_ligase	e7osmeL141	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
O [auth eL13]	Pup_ligase	e7osmeL131	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
N [auth uL5]	Pup_ligase	e7osmuL51	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
M [auth uL16]	SBP_bac_1	e7osmuL161	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SBP_bac_1	ECOD (v294.2)
L [auth uL6]	Pup_ligase	e7osmuL61	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
K [auth eL8]	Pup_ligase	e7osmeL81	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)
J [auth uL30]	Pup_ligase	e7osmuL301	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Pup_ligase	ECOD (v294.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
PA [auth eL40]	Ubiquitin	-	-	-
ZB [auth eS31]	Ubiquitin-40S ribosomal protein S31	-	-	-
I [auth eL6]	60S ribosomal protein L6	-	-	-
EC [auth uL11]	60S ribosomal protein L12-B	-	-	-
DC [auth mRNA]	MRNA	-	-	-
CC [auth PSIT]	FMET tRNA	-	-	-
BC [auth ASIT]	PHE tRNA	-	-	-
H [auth uL18]	60S ribosomal protein L5	-	-	-
AC [auth eEF2]	Elongation factor 2	-	-	-
YB [auth RACK]	BJ4_G0022010.mRNA.1.CDS.1	-	-	-
XB [auth eS30]	40S ribosomal protein S30	-	-	-
WB [auth uS14]	HLJ1_G0030400.mRNA.1.CDS.1	-	-	-
VB [auth eS28]	eS28	-	-	-
UB [auth eS27]	40S ribosomal protein S27-A	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding RNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal small subunit assembly protein-RNA complex assembly ribosomal small subunit biogenesis cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly protein-containing complex assembly ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal small subunit assembly protein-RNA complex assembly ribosomal small subunit biogenesis cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly protein-containing complex assembly cellular process cellular component organization or biogenesis ribosome assembly RNA metabolic process rRNA processing maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process maturation of SSU-rRNA RNA processing rRNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process biosynthetic process metabolic process macromolecule metabolic process protein metabolic process translation protein biosynthetic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome
TB [auth eS26]	40S ribosomal protein S26	-	-	-
SB [auth eS25]	40S ribosomal protein S25	-	-	-
RB [auth eS24]	40S ribosomal protein S24	-	-	-
G [auth uL4]	BJ4_G0008850.mRNA.1.CDS.1	-	-	-
QB [auth uS12]	40S ribosomal protein S23	-	-	-
PB [auth uS8]	40S ribosomal protein S22-A	-	-	-
OB [auth eS21]	40S ribosomal protein S21	-	-	-
NB [auth uS10]	40S ribosomal protein S20	-	-	-
MB [auth eS19]	40S ribosomal protein S19-A	-	-	-
LB [auth uS13]	40S ribosomal protein S18-B	-	-	-
KB [auth eS17]	BJ4_G0020710.mRNA.1.CDS.1	-	-	-
JB [auth uS9]	BJ4_G0008010.mRNA.1.CDS.1	-	-	-
IB [auth uS19]	40S ribosomal protein S15	-	-	-
HB [auth uS11]	40S ribosomal protein S14-A	-	-	-
F [auth uL3]	60S ribosomal protein L3	-	-	-
GB [auth uS15]	40S ribosomal protein S13	-	-	-
FB [auth uS17]	40S ribosomal protein S11-B	-	-	-
EB [auth eS10]	40S ribosomal protein S10-A	-	-	-
DB [auth uS4]	BJ4_G0026100.mRNA.1.CDS.1	-	-	-
CB [auth eS8]	40S ribosomal protein S8	-	-	-
BB [auth eS7]	40S ribosomal protein S7	-	-	-
AB [auth eS6]	40S ribosomal protein S6	-	-	-
ZA [auth uS7]	Rps5p	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome
YA [auth eS4]	40S ribosomal protein S4	-	-	-
XA [auth uS3]	BJ4_G0045400.mRNA.1.CDS.1	-	-	-
E [auth uL2]	60S ribosomal protein L2-B	-	-	-
WA [auth uS5]	40S ribosomal protein S2	-	-	-
VA [auth eS1]	40S ribosomal protein S1	-	-	-
UA [auth uS2]	40S ribosomal protein S0	-	-	-
TA [auth 18S]	18S rRNA	-	-	-
SA [auth eL43]	60S ribosomal protein L43-A	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome large ribosomal subunit
RA [auth eL42]	BJ4_G0001880.mRNA.1.CDS.1	-	-	-
QA [auth eL41]	eL41	-	-	-
OA [auth eL39]	60S ribosomal protein L39	-	-	-
NA [auth eL38]	BJ4_G0032190.mRNA.1.CDS.1	-	-	-
D [auth uL10]	60S acidic ribosomal protein P0	-	-	-
MA [auth eL37]	Ribosomal protein L37	-	-	-
LA [auth eL36]	60S ribosomal protein L36-A	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization cytosolic large ribosomal subunit assembly membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization cellular component assembly protein-RNA complex organization cytosolic ribosome assembly ribosomal large subunit assembly protein-containing complex assembly cellular component organization or biogenesis ribosome assembly RNA metabolic process rRNA processing nucleobase-containing compound biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process RNA processing rRNA metabolic process maturation of LSU-rRNA	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome large ribosomal subunit
KA [auth uL29]	BJ4_G0044250.mRNA.1.CDS.1	-	-	-
JA [auth eL34]	60S ribosomal protein L34-A	-	-	-
IA [auth eL33]	BJ4_G0025510.mRNA.1.CDS.1	-	-	-
HA [auth eL32]	HN1_G0013350.mRNA.1.CDS.1	-	-	-
GA [auth eL31]	BJ4_G0008090.mRNA.1.CDS.1	-	-	-
FA [auth eL30]	BJ4_G0020000.mRNA.1.CDS.1	-	-	-
EA [auth eL29]	60S ribosomal protein L29	-	-	-
DA [auth uL15]	60S ribosomal protein L28	-	-	-
C [auth 58S]	5.8S rRNA	-	-	-
CA [auth eL27]	60S ribosomal protein L27	-	-	-
BA [auth uL24]	60S ribosomal protein L26-A	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular component organization or biogenesis ribosomal large subunit biogenesis	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome large ribosomal subunit
AA [auth uL23]	60S ribosomal protein L25	-	-	-
Z [auth eL24]	60S ribosomal protein L24-A	-	-	-
Y [auth uL14]	60S ribosomal protein L23-B	-	-	-
X [auth eL22]	60S ribosomal protein L22-A	-	-	-
W [auth eL21]	BJ4_G0003770.mRNA.1.CDS.1	-	-	-
V [auth eL20]	60S ribosomal protein L20	-	-	-
U [auth eL19]	60S ribosomal protein L19-A	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome large ribosomal subunit
T [auth eL18]	BJ4_G0033900.mRNA.1.CDS.1	-	-	-
B [auth AB]	5S rRNA	-	-	-
S [auth uL22]	BJ4_G0005750.mRNA.1.CDS.1	-	-	-
R [auth uL13]	60S ribosomal protein L16-A	-	-	-
Q [auth eL15]	60S ribosomal protein L15-A	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization cytosolic large ribosomal subunit assembly membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization cellular component assembly protein-RNA complex organization cytosolic ribosome assembly ribosomal large subunit assembly protein-containing complex assembly cellular component organization or biogenesis ribosome assembly RNA metabolic process rRNA processing nucleobase-containing compound biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process RNA processing rRNA metabolic process maturation of LSU-rRNA	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome large ribosomal subunit
P [auth eL14]	60S ribosomal protein L14-A	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	catabolic process macroautophagy autophagy cellular process metabolic process process utilizing autophagic mechanism primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation protein metabolic process catabolic process macroautophagy autophagy cellular process metabolic process process utilizing autophagic mechanism primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation protein metabolic process macromolecule metabolic process cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular component organization or biogenesis ribosomal large subunit biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly protein-RNA complex assembly cellular component organization organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly ribosome assembly RNA metabolic process rRNA processing nucleobase-containing compound biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process RNA processing rRNA metabolic process maturation of LSU-rRNA	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytoplasm cytosol protein-containing complex ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome ribonucleoprotein complex ribosome large ribosomal subunit
O [auth eL13]	60S ribosomal protein L13	-	-	-
N [auth uL5]	BJ4_G0027750.mRNA.1.CDS.1	-	-	-
M [auth uL16]	60S ribosomal protein L10	-	-	-
L [auth uL6]	60S ribosomal protein L9-A	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome large ribosomal subunit
K [auth eL8]	60S ribosomal protein L8-A	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process ribonucleoprotein complex biogenesis RNA metabolic process rRNA processing primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process ribonucleoprotein complex biogenesis RNA metabolic process rRNA processing nucleobase-containing compound biosynthetic process ribosomal large subunit biogenesis nucleic acid metabolic process cellular component biogenesis nucleobase-containing compound metabolic process RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process cellular component organization or biogenesis RNA processing rRNA metabolic process maturation of LSU-rRNA	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome large ribosomal subunit
J [auth uL30]	60S ribosomal protein L7-A	-	-	-
A [auth 25S]	25S rRNA	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
UB [auth eS27]	IPR023407	Small ribosomal subunit protein eS27, zinc-binding domain superfamily	Homologous Superfamily
UB [auth eS27]	IPR000592	Small ribosomal subunit protein eS27	Family
UB [auth eS27]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
ZA [auth uS7]	IPR020606	Small ribosomal subunit protein uS7, conserved site	Conserved Site
ZA [auth uS7]	IPR000235	Small ribosomal subunit protein uS7	Family
ZA [auth uS7]	IPR036823	Small ribosomal subunit protein uS7 domain superfamily	Homologous Superfamily
ZA [auth uS7]	IPR023798	Small ribosomal subunit protein uS7 domain	Domain
ZA [auth uS7]	IPR005716	Ribosomal protein uS7, eukaryotic/archaeal	Family
SA [auth eL43]	IPR002674	Large ribosomal subunit protein eL43	Family
SA [auth eL43]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
SA [auth eL43]	IPR011331	Large ribosomal subunit protein eL37/eL43	Homologous Superfamily
SA [auth eL43]	IPR050522	Eukaryotic ribosomal protein eL43	Family
LA [auth eL36]	IPR000509	Large ribosomal subunit protein eL36	Family
LA [auth eL36]	IPR038097	Large ribosomal subunit protein eL36 domain superfamily	Homologous Superfamily
BA [auth uL24]	IPR005756	Large ribosomal subunit protein uL24, eukaryota_archaea	Family
BA [auth uL24]	IPR041988	Large ribosomal subunit protein uL24, KOW domain	Domain
BA [auth uL24]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
BA [auth uL24]	IPR005824	KOW	Domain
BA [auth uL24]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
BA [auth uL24]	IPR005825	Large ribosomal subunit protein uL24, conserved site	Conserved Site
U [auth eL19]	IPR039547	Large ribosomal subunit protein eL19	Family
U [auth eL19]	IPR023638	Large ribosomal subunit protein eL19, conserved site	Conserved Site
U [auth eL19]	IPR057260	Ribosomal protein L19e, C-terminal domain	Domain
U [auth eL19]	IPR033935	Large ribosomal subunit protein eL19, eukaryotic	Domain
U [auth eL19]	IPR015972	Large ribosomal subunit protein eL19, domain 1	Homologous Superfamily
U [auth eL19]	IPR057259	Ribosomal protein L19e, N-terminal domain	Domain
U [auth eL19]	IPR035970	Large ribosomal subunit protein eL19 superfamily	Homologous Superfamily
U [auth eL19]	IPR000196	Large ribosomal subunit protein eL19 domain	Domain
Q [auth eL15]	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
Q [auth eL15]	IPR020925	Large ribosomal subunit protein eL15, conserved site	Conserved Site
Q [auth eL15]	IPR024794	Large ribosomal subunit protein eL15 core domain superfamily	Homologous Superfamily
Q [auth eL15]	IPR000439	Large ribosomal subunit protein eL15	Family
P [auth eL14]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
P [auth eL14]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
P [auth eL14]	IPR039660	Large ribosomal subunit protein eL14	Family
P [auth eL14]	IPR002784	Large ribosomal subunit protein eL14 domain	Domain
P [auth eL14]	IPR005824	KOW	Domain
L [auth uL6]	IPR020040	Large ribosomal subunit protein uL6, alpha-beta domain	Domain
L [auth uL6]	IPR002359	Large ribosomal subunit protein uL6, conserved site-2	Conserved Site
L [auth uL6]	IPR036789	Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily	Homologous Superfamily
L [auth uL6]	IPR000702	Large ribosomal subunit protein uL6-like	Family
K [auth eL8]	IPR050257	Large ribosomal subunit protein eL8/uL1-like	Family
K [auth eL8]	IPR004038	Ribosomal protein eL8/eL30/eS12/Gadd45	Domain
K [auth eL8]	IPR004037	Large ribosomal subunit protein eL8-like, conserved site	Conserved Site
K [auth eL8]	IPR029064	Ribosomal protein eL30-like superfamily	Homologous Superfamily
K [auth eL8]	IPR018492	Ribosomal protein eL8/Nhp2 family	Family
K [auth eL8]	IPR001921	Large ribosomal subunit protein eL8, eukaryota	Family

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
BC [auth ASIT]	YG	Parent Component: G
AC [auth eEF2]	DDE	Parent Component: HIS : AA0040 : 2'-[3-carboxamido-3-(trimethylammonio)propyl]-L-histidine MOD:00049

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.