7OJS

Complex structure 2 of the Bacillus subtilis CdaA c-di-AMP cyclase domain (CdaACD) and the phosphoglucomutase GlmM short variant (GlmMF369)

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
L	SCOP2B Superfamily	DacA-like	8094673	3001724	SCOP2B (2022-06-29)
C [auth H]	SCOP2B Superfamily	DacA-like	8094673	3001724	SCOP2B (2022-06-29)
D [auth I]	SCOP2B Superfamily	DacA-like	8094673	3001724	SCOP2B (2022-06-29)
G [auth D]	SCOP2B Superfamily	DacA-like	8094673	3001724	SCOP2B (2022-06-29)
H [auth E]	SCOP2B Superfamily	DacA-like	8094673	3001724	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	DacA-like	8094673	3001724	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
E [auth A]	PF02878	e7ojsA1	A: a/b three-layered sandwiches	X: Phosphoglucomutase, first 3 domains (From Topology)	H: Phosphoglucomutase, first 3 domains (From Topology)	T: Phosphoglucomutase, first 3 domains	F: PF02878	ECOD (1.6)
E [auth A]	PF02879	e7ojsA2	A: a/b three-layered sandwiches	X: Phosphoglucomutase, first 3 domains (From Topology)	H: Phosphoglucomutase, first 3 domains (From Topology)	T: Phosphoglucomutase, first 3 domains	F: PF02879	ECOD (1.6)
E [auth A]	PF02880	e7ojsA3	A: a/b three-layered sandwiches	X: Phosphoglucomutase, first 3 domains (From Topology)	H: Phosphoglucomutase, first 3 domains (From Topology)	T: Phosphoglucomutase, first 3 domains	F: PF02880	ECOD (1.6)
A [auth C]	PF02878	e7ojsC1	A: a/b three-layered sandwiches	X: Phosphoglucomutase, first 3 domains (From Topology)	H: Phosphoglucomutase, first 3 domains (From Topology)	T: Phosphoglucomutase, first 3 domains	F: PF02878	ECOD (1.6)
A [auth C]	PF02879	e7ojsC2	A: a/b three-layered sandwiches	X: Phosphoglucomutase, first 3 domains (From Topology)	H: Phosphoglucomutase, first 3 domains (From Topology)	T: Phosphoglucomutase, first 3 domains	F: PF02879	ECOD (1.6)
A [auth C]	PF02880	e7ojsC3	A: a/b three-layered sandwiches	X: Phosphoglucomutase, first 3 domains (From Topology)	H: Phosphoglucomutase, first 3 domains (From Topology)	T: Phosphoglucomutase, first 3 domains	F: PF02880	ECOD (1.6)
B [auth F]	PF02878	e7ojsF1	A: a/b three-layered sandwiches	X: Phosphoglucomutase, first 3 domains (From Topology)	H: Phosphoglucomutase, first 3 domains (From Topology)	T: Phosphoglucomutase, first 3 domains	F: PF02878	ECOD (1.6)
B [auth F]	PF02879	e7ojsF2	A: a/b three-layered sandwiches	X: Phosphoglucomutase, first 3 domains (From Topology)	H: Phosphoglucomutase, first 3 domains (From Topology)	T: Phosphoglucomutase, first 3 domains	F: PF02879	ECOD (1.6)
B [auth F]	PF02880	e7ojsF3	A: a/b three-layered sandwiches	X: Phosphoglucomutase, first 3 domains (From Topology)	H: Phosphoglucomutase, first 3 domains (From Topology)	T: Phosphoglucomutase, first 3 domains	F: PF02880	ECOD (1.6)
F [auth B]	PF02878	e7ojsB1	A: a/b three-layered sandwiches	X: Phosphoglucomutase, first 3 domains (From Topology)	H: Phosphoglucomutase, first 3 domains (From Topology)	T: Phosphoglucomutase, first 3 domains	F: PF02878	ECOD (1.6)
F [auth B]	PF02879	e7ojsB2	A: a/b three-layered sandwiches	X: Phosphoglucomutase, first 3 domains (From Topology)	H: Phosphoglucomutase, first 3 domains (From Topology)	T: Phosphoglucomutase, first 3 domains	F: PF02879	ECOD (1.6)
F [auth B]	PF02880	e7ojsB3	A: a/b three-layered sandwiches	X: Phosphoglucomutase, first 3 domains (From Topology)	H: Phosphoglucomutase, first 3 domains (From Topology)	T: Phosphoglucomutase, first 3 domains	F: PF02880	ECOD (1.6)
I [auth G]	PF02878	e7ojsG1	A: a/b three-layered sandwiches	X: Phosphoglucomutase, first 3 domains (From Topology)	H: Phosphoglucomutase, first 3 domains (From Topology)	T: Phosphoglucomutase, first 3 domains	F: PF02878	ECOD (1.6)
I [auth G]	PF02879	e7ojsG2	A: a/b three-layered sandwiches	X: Phosphoglucomutase, first 3 domains (From Topology)	H: Phosphoglucomutase, first 3 domains (From Topology)	T: Phosphoglucomutase, first 3 domains	F: PF02879	ECOD (1.6)
I [auth G]	PF02880	e7ojsG3	A: a/b three-layered sandwiches	X: Phosphoglucomutase, first 3 domains (From Topology)	H: Phosphoglucomutase, first 3 domains (From Topology)	T: Phosphoglucomutase, first 3 domains	F: PF02880	ECOD (1.6)
J	PF02878	e7ojsJ1	A: a/b three-layered sandwiches	X: Phosphoglucomutase, first 3 domains (From Topology)	H: Phosphoglucomutase, first 3 domains (From Topology)	T: Phosphoglucomutase, first 3 domains	F: PF02878	ECOD (1.6)
J	PF02879	e7ojsJ2	A: a/b three-layered sandwiches	X: Phosphoglucomutase, first 3 domains (From Topology)	H: Phosphoglucomutase, first 3 domains (From Topology)	T: Phosphoglucomutase, first 3 domains	F: PF02879	ECOD (1.6)
J	PF02880	e7ojsJ3	A: a/b three-layered sandwiches	X: Phosphoglucomutase, first 3 domains (From Topology)	H: Phosphoglucomutase, first 3 domains (From Topology)	T: Phosphoglucomutase, first 3 domains	F: PF02880	ECOD (1.6)
L	PF02457	e7ojsL1	A: a+b three layers	X: DisA nucleotide-binding domain (From Topology)	H: DisA nucleotide-binding domain (From Topology)	T: DisA nucleotide-binding domain	F: PF02457	ECOD (1.6)
C [auth H]	PF02457	e7ojsH1	A: a+b three layers	X: DisA nucleotide-binding domain (From Topology)	H: DisA nucleotide-binding domain (From Topology)	T: DisA nucleotide-binding domain	F: PF02457	ECOD (1.6)
D [auth I]	PF02457	e7ojsI1	A: a+b three layers	X: DisA nucleotide-binding domain (From Topology)	H: DisA nucleotide-binding domain (From Topology)	T: DisA nucleotide-binding domain	F: PF02457	ECOD (1.6)
G [auth D]	PF02457	e7ojsD1	A: a+b three layers	X: DisA nucleotide-binding domain (From Topology)	H: DisA nucleotide-binding domain (From Topology)	T: DisA nucleotide-binding domain	F: PF02457	ECOD (1.6)
H [auth E]	PF02457	e7ojsE1	A: a+b three layers	X: DisA nucleotide-binding domain (From Topology)	H: DisA nucleotide-binding domain (From Topology)	T: DisA nucleotide-binding domain	F: PF02457	ECOD (1.6)
K	PF02457	e7ojsK1	A: a+b three layers	X: DisA nucleotide-binding domain (From Topology)	H: DisA nucleotide-binding domain (From Topology)	T: DisA nucleotide-binding domain	F: PF02457	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth C], B [auth F], E [auth A], F [auth B], I [auth G], A [auth C], B [auth F], E [auth A], F [auth B], I [auth G], J	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I (PGM_PMM_I)	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I	-	Domain
A [auth C], B [auth F], E [auth A], F [auth B], I [auth G], A [auth C], B [auth F], E [auth A], F [auth B], I [auth G], J	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II (PGM_PMM_II)	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II	-	Domain
A [auth C], B [auth F], E [auth A], F [auth B], I [auth G], A [auth C], B [auth F], E [auth A], F [auth B], I [auth G], J	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III (PGM_PMM_III)	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III	-	Domain
C [auth H], D [auth I], G [auth D], H [auth E], K, C [auth H], D [auth I], G [auth D], H [auth E], K, L	PF02457	DisA bacterial checkpoint controller nucleotide-binding (DAC)	DisA bacterial checkpoint controller nucleotide-binding	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth C], B [auth F], E [auth A], F [auth B], I [auth G], A [auth C], B [auth F], E [auth A], F [auth B], I [auth G], J	Phosphoglucosamine mutase	cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding isomerase activity phosphoglucosamine mutase activity intramolecular phosphotransferase activity catalytic activity intramolecular transferase activity phosphomannomutase activity	carbohydrate metabolic process organic substance metabolic process primary metabolic process metabolic process carbohydrate derivative biosynthetic process amino sugar biosynthetic process nucleotide-sugar metabolic process cellular metabolic process carbohydrate derivative metabolic process nucleobase-containing compound biosynthetic process UDP-N-acetylglucosamine biosynthetic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process biosynthetic process carbohydrate metabolic process organic substance metabolic process primary metabolic process metabolic process carbohydrate derivative biosynthetic process amino sugar biosynthetic process nucleotide-sugar metabolic process cellular metabolic process carbohydrate derivative metabolic process nucleobase-containing compound biosynthetic process UDP-N-acetylglucosamine biosynthetic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process biosynthetic process nucleobase-containing small molecule metabolic process organic cyclic compound biosynthetic process organic substance biosynthetic process amino sugar metabolic process small molecule metabolic process cellular process nucleotide-sugar biosynthetic process UDP-N-acetylglucosamine metabolic process phosphorus metabolic process cellular biosynthetic process cell wall organization or biogenesis glycosaminoglycan metabolic process organonitrogen compound biosynthetic process cellular component biogenesis peptidoglycan metabolic process glycosaminoglycan biosynthetic process cellular component organization or biogenesis peptidoglycan-based cell wall biogenesis organonitrogen compound metabolic process macromolecule biosynthetic process peptidoglycan biosynthetic process cell wall biogenesis cell wall macromolecule biosynthetic process aminoglycan metabolic process aminoglycan biosynthetic process macromolecule metabolic process	intracellular anatomical structure cytoplasm cellular anatomical entity cytosol
C [auth H], D [auth I], G [auth D], H [auth E], K, C [auth H], D [auth I], G [auth D], H [auth E], K, L	Cyclic di-AMP synthase CdaA	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding diadenylate cyclase activity transferase activity nucleotidyltransferase activity catalytic activity transferase activity, transferring phosphorus-containing groups phosphorus-oxygen lyase activity cyclase activity lyase activity adenylate cyclase activity	ribose phosphate metabolic process nucleotide biosynthetic process organonitrogen compound biosynthetic process carbohydrate derivative metabolic process purine ribonucleotide biosynthetic process cAMP biosynthetic process cyclic nucleotide metabolic process nucleobase-containing compound metabolic process ribonucleotide biosynthetic process purine nucleotide metabolic process organic substance metabolic process ribonucleotide metabolic process nucleobase-containing small molecule metabolic process purine-containing compound biosynthetic process cyclic nucleotide biosynthetic process ribose phosphate metabolic process nucleotide biosynthetic process organonitrogen compound biosynthetic process carbohydrate derivative metabolic process purine ribonucleotide biosynthetic process cAMP biosynthetic process cyclic nucleotide metabolic process nucleobase-containing compound metabolic process ribonucleotide biosynthetic process purine nucleotide metabolic process organic substance metabolic process ribonucleotide metabolic process nucleobase-containing small molecule metabolic process purine-containing compound biosynthetic process cyclic nucleotide biosynthetic process phosphate-containing compound metabolic process organic substance biosynthetic process small molecule metabolic process phosphorus metabolic process ribose phosphate biosynthetic process nucleoside phosphate metabolic process carbohydrate derivative biosynthetic process organonitrogen compound metabolic process cAMP metabolic process cyclic purine nucleotide metabolic process cellular metabolic process primary metabolic process nucleotide metabolic process nucleobase-containing compound biosynthetic process purine-containing compound metabolic process organic cyclic compound metabolic process biosynthetic process organophosphate metabolic process organophosphate biosynthetic process organic cyclic compound biosynthetic process nucleoside phosphate biosynthetic process metabolic process cellular process purine ribonucleotide metabolic process purine nucleotide biosynthetic process	cell periphery plasma membrane membrane cellular anatomical entity

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth C], B [auth F], E [auth A], F [auth B], I [auth G], A [auth C], B [auth F], E [auth A], F [auth B], I [auth G], J	IPR005843	Alpha-D-phosphohexomutase, C-terminal	Domain
A [auth C], B [auth F], E [auth A], F [auth B], I [auth G], A [auth C], B [auth F], E [auth A], F [auth B], I [auth G], J	IPR006352	Phosphoglucosamine mutase, bacterial type	Family
A [auth C], B [auth F], E [auth A], F [auth B], I [auth G], A [auth C], B [auth F], E [auth A], F [auth B], I [auth G], J	IPR005846	Alpha-D-phosphohexomutase, alpha/beta/alpha domain III	Domain
A [auth C], B [auth F], E [auth A], F [auth B], I [auth G], A [auth C], B [auth F], E [auth A], F [auth B], I [auth G], J	IPR005845	Alpha-D-phosphohexomutase, alpha/beta/alpha domain II	Domain
A [auth C], B [auth F], E [auth A], F [auth B], I [auth G], A [auth C], B [auth F], E [auth A], F [auth B], I [auth G], J	IPR016055	Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III	Homologous Superfamily
A [auth C], B [auth F], E [auth A], F [auth B], I [auth G], A [auth C], B [auth F], E [auth A], F [auth B], I [auth G], J	IPR016066	Alpha-D-phosphohexomutase, conserved site	Conserved Site
A [auth C], B [auth F], E [auth A], F [auth B], I [auth G], A [auth C], B [auth F], E [auth A], F [auth B], I [auth G], J	IPR005844	Alpha-D-phosphohexomutase, alpha/beta/alpha domain I	Domain
A [auth C], B [auth F], E [auth A], F [auth B], I [auth G], A [auth C], B [auth F], E [auth A], F [auth B], I [auth G], J	IPR005841	Alpha-D-phosphohexomutase superfamily	Family
A [auth C], B [auth F], E [auth A], F [auth B], I [auth G], A [auth C], B [auth F], E [auth A], F [auth B], I [auth G], J	IPR036900	Alpha-D-phosphohexomutase, C-terminal domain superfamily	Homologous Superfamily
C [auth H], D [auth I], G [auth D], H [auth E], K, C [auth H], D [auth I], G [auth D], H [auth E], K, L	IPR045585	Diadenylate cyclase CdaA, N-terminal domain	Domain
C [auth H], D [auth I], G [auth D], H [auth E], K, C [auth H], D [auth I], G [auth D], H [auth E], K, L	IPR036888	DNA integrity scanning protein, DisA, N-terminal domain superfamily	Homologous Superfamily
C [auth H], D [auth I], G [auth D], H [auth E], K, C [auth H], D [auth I], G [auth D], H [auth E], K, L	IPR014046	Diadenylate cyclase	Family
C [auth H], D [auth I], G [auth D], H [auth E], K, C [auth H], D [auth I], G [auth D], H [auth E], K, L	IPR003390	DNA integrity scanning protein, DisA, N-terminal	Domain
C [auth H], D [auth I], G [auth D], H [auth E], K, C [auth H], D [auth I], G [auth D], H [auth E], K, L	IPR034701	Diadenylate cyclase CdaA	Family