Model of open pentamer of the Haliangium ochraceum encapsulin from symmetry expansion of icosahedral single particle reconstruction
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| J [auth E] | SCOP2B Superfamily | Phage coat protein-like | 8106529 | 3001529 | SCOP2B (2022-06-29) |
| I [auth D] | SCOP2B Superfamily | Phage coat protein-like | 8106529 | 3001529 | SCOP2B (2022-06-29) |
| H [auth C] | SCOP2B Superfamily | Phage coat protein-like | 8106529 | 3001529 | SCOP2B (2022-06-29) |
| G [auth B] | SCOP2 Family | Linocin M18-like | 8106528 | 4004781 | SCOP2 (2022-06-29) |
| G [auth B] | SCOP2 Superfamily | Phage coat protein-like | 8106529 | 3001529 | SCOP2 (2022-06-29) |
| A | SCOP2B Superfamily | Phage coat protein-like | 8106529 | 3001529 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| F [auth 5] | AAA_lid_RFC1 | e7oeu51 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: AAA_lid_RFC1 | ECOD (v295.2) |
| E [auth 4] | AAA_lid_RFC1 | e7oeu41 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: AAA_lid_RFC1 | ECOD (v295.2) |
| D [auth 3] | AAA_lid_RFC1 | e7oeu31 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: AAA_lid_RFC1 | ECOD (v295.2) |
| C [auth 2] | AAA_lid_RFC1 | e7oeu21 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: AAA_lid_RFC1 | ECOD (v295.2) |
| B [auth 1] | AAA_lid_RFC1 | e7oeu11 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: AAA_lid_RFC1 | ECOD (v295.2) |
| J [auth E] | ATP-cone | e7oeuE1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: ATP-cone | ECOD (v295.2) |
| I [auth D] | ATP-cone | e7oeuD1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: ATP-cone | ECOD (v295.2) |
| H [auth C] | ATP-cone | e7oeuC1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: ATP-cone | ECOD (v295.2) |
| G [auth B] | ATP-cone | e7oeuB1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: ATP-cone | ECOD (v295.2) |
| A | ATP-cone | e7oeuA1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: ATP-cone | ECOD (v295.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| A, G [auth B], H [auth C], I [auth D], J [auth E] | PF04454 | Encapsulating protein for peroxidase (Linocin_M18) | Encapsulating protein for peroxidase | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| B [auth 1], C [auth 2], D [auth 3], E [auth 4], F [auth 5] | Haliangium ochraceum encapsulated ferritin | - | ||
| A, G [auth B], H [auth C], I [auth D], J [auth E] | Linocin_M18 bacteriocin protein | - | - |