7OD9 | pdb_00007od9

Crystal structure of activated CheY fused to the C-terminal domain of CheF

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B [auth A]	SCOP2 Family	CheY-related	8107251	4003632	SCOP2 (2022-06-29)
B [auth A]	SCOP2 Superfamily	CheY-like	8107252	3001156	SCOP2 (2022-06-29)
A [auth B]	SCOP2B Superfamily	CheY-like	8107252	3001156	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D [auth F]	TFIIE_alpha	e7od9F1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: TFIIE_alpha	ECOD (1.6)
C	F_UNCLASSIFIED	e7od9C1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: F_UNCLASSIFIED	ECOD (1.6)
B [auth A]	Response_reg	e7od9A1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: CheY-like	F: Response_reg	ECOD (1.6)
A [auth B]	Response_reg	e7od9B1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: CheY-like	F: Response_reg	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B [auth A]	3.40.50.2300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Response regulator	CATH (utative)
A [auth B]	3.40.50.2300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Response regulator	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth B], B [auth A]	PF00072	Response regulator receiver domain (Response_reg)	Response regulator receiver domain	This domain receives the signal from the sensor partner in bacterial two-component systems. It is usually found N-terminal to a DNA binding effector domain.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C, D [auth F]	C-terminal domain of CheF from Methanococcus maripaludis	-	chemotaxis response to stimulus taxis response to chemical response to external stimulus locomotion	-
A [auth B], B [auth A]	Response regulator receiver protein	cation binding ion binding binding metal ion binding small molecule binding	cellular response to stimulus regulation of biological process phosphorelay signal transduction system regulation of cellular process response to stimulus signaling biological regulation intracellular signal transduction cell communication cellular process signal transduction	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C, D [auth F]	IPR007381	Taxis protein CheF1/F2	Family
A [auth B], B [auth A]	IPR052048	Signal Transduction Response Regulator	Family
A [auth B], B [auth A]	IPR011006	CheY-like superfamily	Homologous Superfamily
A [auth B], B [auth A]	IPR001789	Signal transduction response regulator, receiver domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.