7O4A
Crystal structure of Penicillin-Binding Protein 1 (PBP1) from Staphylococcus aureus in complex with piperacillin
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth BBB] | PF03717 | e7o4aBBB4 | A: beta complex topology | X: Penicillin binding protein dimerisation domain (From Topology) | H: Penicillin binding protein dimerisation domain (From Topology) | T: Penicillin binding protein dimerisation domain | F: PF03717 | ECOD (1.6) |
B [auth BBB] | PF00905 | e7o4aBBB2 | A: alpha complex topology | X: alpha-helical domain in beta-lactamase/transpeptidase-like proteins (From Topology) | H: alpha-helical domain in beta-lactamase/transpeptidase-like proteins (From Topology) | T: alpha-helical domain in beta-lactamase/transpeptidase-like proteins | F: PF00905 | ECOD (1.6) |
B [auth BBB] | F_UNCLASSIFIED | e7o4aBBB1 | A: a+b two layers | X: ClpS-like | H: Penicillin binding protein ClpS-like domain (From Topology) | T: Penicillin binding protein ClpS-like domain | F: F_UNCLASSIFIED | ECOD (1.6) |
B [auth BBB] | PF00905 | e7o4aBBB3 | A: a+b three layers | X: Profilin-like | H: a+b domain in beta-lactamase/transpeptidase-like proteins (From Topology) | T: a+b domain in beta-lactamase/transpeptidase-like proteins | F: PF00905 | ECOD (1.6) |
A [auth AAA] | PF03717 | e7o4aAAA2 | A: beta complex topology | X: Penicillin binding protein dimerisation domain (From Topology) | H: Penicillin binding protein dimerisation domain (From Topology) | T: Penicillin binding protein dimerisation domain | F: PF03717 | ECOD (1.6) |
A [auth AAA] | PF00905 | e7o4aAAA1 | A: alpha complex topology | X: alpha-helical domain in beta-lactamase/transpeptidase-like proteins (From Topology) | H: alpha-helical domain in beta-lactamase/transpeptidase-like proteins (From Topology) | T: alpha-helical domain in beta-lactamase/transpeptidase-like proteins | F: PF00905 | ECOD (1.6) |
A [auth AAA] | F_UNCLASSIFIED | e7o4aAAA4 | A: a+b two layers | X: ClpS-like | H: Penicillin binding protein ClpS-like domain (From Topology) | T: Penicillin binding protein ClpS-like domain | F: F_UNCLASSIFIED | ECOD (1.6) |
A [auth AAA] | PF00905 | e7o4aAAA3 | A: a+b three layers | X: Profilin-like | H: a+b domain in beta-lactamase/transpeptidase-like proteins (From Topology) | T: a+b domain in beta-lactamase/transpeptidase-like proteins | F: PF00905 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth AAA], B [auth BBB] | PF00905 | Penicillin binding protein transpeptidase domain (Transpeptidase) | Penicillin binding protein transpeptidase domain | The active site serine (residue 337 in Swiss:P14677) is conserved in all members of this family. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth AAA], B [auth BBB] | Penicillin-binding protein 1 | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth AAA], B [auth BBB] | IPR005543 | PASTA domain | Domain |
A [auth AAA], B [auth BBB] | IPR012338 | Beta-lactamase/transpeptidase-like | Homologous Superfamily |
A [auth AAA], B [auth BBB] | IPR005311 | Penicillin-binding protein, dimerisation domain | Domain |
A [auth AAA], B [auth BBB] | IPR001460 | Penicillin-binding protein, transpeptidase | Domain |
A [auth AAA], B [auth BBB] | IPR036138 | Penicillin-binding protein, dimerisation domain superfamily | Homologous Superfamily |