7O3D
Cooperation between the intrinsically disordered and ordered regions of Spt6 regulates nucleosome and Pol II CTD binding, and nucleosome assembly
External Resource: Annotation
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF14639 | Holliday-junction resolvase-like of SPT6 (YqgF) | Holliday-junction resolvase-like of SPT6 | The YqgF domain of SPT6 proteins is homologous to the E.coli RuvC [1] but its putative catalytic site lacks the carboxylate side chains critical for coordinating magnesium ions that mediate phosphodiester bond-cleavage [2] | Domain | |
PF21710 | Spt6, S1/OB domain (Spt6_S1) | Spt6, S1/OB domain | This entry represents the S1/OB-fold domain of Spt6. This domain has structural similarity to S1 domain but lacks the typical S1 binding cleft residues involved in nucleic acid binding [1], therefore, this domain in Spt6 may be involved in interacti ... | Domain | |
PF14635 | Helix-hairpin-helix motif (HHH_7) | Helix-hairpin-helix motif | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR042066 | Spt6, Death-like domain | Homologous Superfamily | |
IPR028231 | Transcription elongation factor Spt6, YqgF domain | Domain | |
IPR037027 | YqgF/RNase H-like domain superfamily | Homologous Superfamily | |
IPR036860 | SH2 domain superfamily | Homologous Superfamily | |
IPR000980 | SH2 domain | Domain | |
IPR006641 | YqgF/RNase H-like domain | Domain | |
IPR010994 | RuvA domain 2-like | Homologous Superfamily | |
IPR023319 | Tex-like protein, HTH domain superfamily | Homologous Superfamily | |
IPR012337 | Ribonuclease H-like superfamily | Homologous Superfamily | |
IPR017072 | Transcription elongation factor Spt6 | Family | |
IPR035420 | Spt6, SH2 domain | Domain | |
IPR032706 | Transcription elongation factor Spt6, helix-hairpin-helix motif | Domain | |
IPR049540 | Spt6-like, S1/OB domain | Domain | |
IPR023323 | Tex-like domain superfamily | Homologous Superfamily | |
IPR028088 | Helix-turn-helix DNA-binding domain of Spt6 | Domain | |
IPR035019 | Spt6, SH2 domain, N terminus | Domain | |
IPR035018 | Spt6, SH2 domain, C terminus | Domain | |
IPR028083 | Spt6 acidic, N-terminal domain | Domain |