7NZ2 | pdb_00007nz2

Cryo-EM structure of the MukBEF-MatP-DNA tetrad

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
FA [auth I4]	MatP_C	e7nz2I42	A: alpha arrays	X: HTH	H: HTH	T: Ribbon-helix-helix	F: MatP_C	ECOD (1.6)
FA [auth I4]	MatP	e7nz2I41	A: alpha arrays	X: Macrodomain Ter protein MatP (From Topology)	H: Macrodomain Ter protein MatP (From Topology)	T: Macrodomain Ter protein MatP	F: MatP	ECOD (1.6)
IA [auth J3]	MatP_C	e7nz2J32	A: alpha arrays	X: HTH	H: HTH	T: Ribbon-helix-helix	F: MatP_C	ECOD (1.6)
IA [auth J3]	MatP	e7nz2J31	A: alpha arrays	X: Macrodomain Ter protein MatP (From Topology)	H: Macrodomain Ter protein MatP (From Topology)	T: Macrodomain Ter protein MatP	F: MatP	ECOD (1.6)
JA [auth J4]	MatP_C	e7nz2J42	A: alpha arrays	X: HTH	H: HTH	T: Ribbon-helix-helix	F: MatP_C	ECOD (1.6)
JA [auth J4]	MatP	e7nz2J41	A: alpha arrays	X: Macrodomain Ter protein MatP (From Topology)	H: Macrodomain Ter protein MatP (From Topology)	T: Macrodomain Ter protein MatP	F: MatP	ECOD (1.6)
HA [auth J2]	MatP_C	e7nz2J21	A: alpha arrays	X: HTH	H: HTH	T: Ribbon-helix-helix	F: MatP_C	ECOD (1.6)
HA [auth J2]	MatP	e7nz2J22	A: alpha arrays	X: Macrodomain Ter protein MatP (From Topology)	H: Macrodomain Ter protein MatP (From Topology)	T: Macrodomain Ter protein MatP	F: MatP	ECOD (1.6)
GA [auth J1]	MatP_C	e7nz2J11	A: alpha arrays	X: HTH	H: HTH	T: Ribbon-helix-helix	F: MatP_C	ECOD (1.6)
GA [auth J1]	MatP	e7nz2J12	A: alpha arrays	X: Macrodomain Ter protein MatP (From Topology)	H: Macrodomain Ter protein MatP (From Topology)	T: Macrodomain Ter protein MatP	F: MatP	ECOD (1.6)
EA [auth I3]	MatP_C	e7nz2I31	A: alpha arrays	X: HTH	H: HTH	T: Ribbon-helix-helix	F: MatP_C	ECOD (1.6)
EA [auth I3]	MatP	e7nz2I32	A: alpha arrays	X: Macrodomain Ter protein MatP (From Topology)	H: Macrodomain Ter protein MatP (From Topology)	T: Macrodomain Ter protein MatP	F: MatP	ECOD (1.6)
DA [auth I2]	MatP_C	e7nz2I21	A: alpha arrays	X: HTH	H: HTH	T: Ribbon-helix-helix	F: MatP_C	ECOD (1.6)
DA [auth I2]	MatP	e7nz2I22	A: alpha arrays	X: Macrodomain Ter protein MatP (From Topology)	H: Macrodomain Ter protein MatP (From Topology)	T: Macrodomain Ter protein MatP	F: MatP	ECOD (1.6)
CA [auth I1]	MatP_C	e7nz2I11	A: alpha arrays	X: HTH	H: HTH	T: Ribbon-helix-helix	F: MatP_C	ECOD (1.6)
CA [auth I1]	MatP	e7nz2I12	A: alpha arrays	X: Macrodomain Ter protein MatP (From Topology)	H: Macrodomain Ter protein MatP (From Topology)	T: Macrodomain Ter protein MatP	F: MatP	ECOD (1.6)
X [auth G4]	PP-binding	e7nz2G41	A: alpha bundles	X: ACP-like	H: Acyl-carrier protein (ACP) (From Topology)	T: Acyl-carrier protein (ACP)	F: PP-binding	ECOD (1.6)
Y [auth H1]	PP-binding	e7nz2H11	A: alpha bundles	X: ACP-like	H: Acyl-carrier protein (ACP) (From Topology)	T: Acyl-carrier protein (ACP)	F: PP-binding	ECOD (1.6)
Z [auth H2]	PP-binding	e7nz2H21	A: alpha bundles	X: ACP-like	H: Acyl-carrier protein (ACP) (From Topology)	T: Acyl-carrier protein (ACP)	F: PP-binding	ECOD (1.6)
W [auth G3]	PP-binding	e7nz2G31	A: alpha bundles	X: ACP-like	H: Acyl-carrier protein (ACP) (From Topology)	T: Acyl-carrier protein (ACP)	F: PP-binding	ECOD (1.6)
V [auth G2]	PP-binding	e7nz2G21	A: alpha bundles	X: ACP-like	H: Acyl-carrier protein (ACP) (From Topology)	T: Acyl-carrier protein (ACP)	F: PP-binding	ECOD (1.6)
U [auth G1]	PP-binding	e7nz2G11	A: alpha bundles	X: ACP-like	H: Acyl-carrier protein (ACP) (From Topology)	T: Acyl-carrier protein (ACP)	F: PP-binding	ECOD (1.6)
BA [auth H4]	PP-binding	e7nz2H41	A: alpha bundles	X: ACP-like	H: Acyl-carrier protein (ACP) (From Topology)	T: Acyl-carrier protein (ACP)	F: PP-binding	ECOD (1.6)
AA [auth H3]	PP-binding	e7nz2H31	A: alpha bundles	X: ACP-like	H: Acyl-carrier protein (ACP) (From Topology)	T: Acyl-carrier protein (ACP)	F: PP-binding	ECOD (1.6)
M [auth E1]	MukE_C	e7nz2E11	A: alpha arrays	X: HTH	H: HTH	T: winged	F: MukE_C	ECOD (1.6)
M [auth E1]	MukE_N	e7nz2E12	A: a+b two layers	X: Chromosome partition protein mukE N-terminal domain (From Topology)	H: Chromosome partition protein mukE N-terminal domain (From Topology)	T: Chromosome partition protein mukE N-terminal domain	F: MukE_N	ECOD (1.6)
Q [auth F1]	MukE_C	e7nz2F12	A: alpha arrays	X: HTH	H: HTH	T: winged	F: MukE_C	ECOD (1.6)
Q [auth F1]	MukE_N	e7nz2F11	A: a+b two layers	X: Chromosome partition protein mukE N-terminal domain (From Topology)	H: Chromosome partition protein mukE N-terminal domain (From Topology)	T: Chromosome partition protein mukE N-terminal domain	F: MukE_N	ECOD (1.6)
T [auth F4]	MukE_C	e7nz2F41	A: alpha arrays	X: HTH	H: HTH	T: winged	F: MukE_C	ECOD (1.6)
T [auth F4]	MukE_N	e7nz2F42	A: a+b two layers	X: Chromosome partition protein mukE N-terminal domain (From Topology)	H: Chromosome partition protein mukE N-terminal domain (From Topology)	T: Chromosome partition protein mukE N-terminal domain	F: MukE_N	ECOD (1.6)
S [auth F3]	MukE_C	e7nz2F32	A: alpha arrays	X: HTH	H: HTH	T: winged	F: MukE_C	ECOD (1.6)
S [auth F3]	MukE_N	e7nz2F31	A: a+b two layers	X: Chromosome partition protein mukE N-terminal domain (From Topology)	H: Chromosome partition protein mukE N-terminal domain (From Topology)	T: Chromosome partition protein mukE N-terminal domain	F: MukE_N	ECOD (1.6)
R [auth F2]	MukE_C	e7nz2F21	A: alpha arrays	X: HTH	H: HTH	T: winged	F: MukE_C	ECOD (1.6)
R [auth F2]	MukE_N	e7nz2F22	A: a+b two layers	X: Chromosome partition protein mukE N-terminal domain (From Topology)	H: Chromosome partition protein mukE N-terminal domain (From Topology)	T: Chromosome partition protein mukE N-terminal domain	F: MukE_N	ECOD (1.6)
P [auth E4]	MukE_C	e7nz2E42	A: alpha arrays	X: HTH	H: HTH	T: winged	F: MukE_C	ECOD (1.6)
P [auth E4]	MukE_N	e7nz2E41	A: a+b two layers	X: Chromosome partition protein mukE N-terminal domain (From Topology)	H: Chromosome partition protein mukE N-terminal domain (From Topology)	T: Chromosome partition protein mukE N-terminal domain	F: MukE_N	ECOD (1.6)
O [auth E3]	MukE_C	e7nz2E32	A: alpha arrays	X: HTH	H: HTH	T: winged	F: MukE_C	ECOD (1.6)
O [auth E3]	MukE_N	e7nz2E31	A: a+b two layers	X: Chromosome partition protein mukE N-terminal domain (From Topology)	H: Chromosome partition protein mukE N-terminal domain (From Topology)	T: Chromosome partition protein mukE N-terminal domain	F: MukE_N	ECOD (1.6)
N [auth E2]	MukE_C	e7nz2E22	A: alpha arrays	X: HTH	H: HTH	T: winged	F: MukE_C	ECOD (1.6)
N [auth E2]	MukE_N	e7nz2E21	A: a+b two layers	X: Chromosome partition protein mukE N-terminal domain (From Topology)	H: Chromosome partition protein mukE N-terminal domain (From Topology)	T: Chromosome partition protein mukE N-terminal domain	F: MukE_N	ECOD (1.6)
L [auth D2]	KicB	e7nz2D22	A: alpha arrays	X: HTH	H: HTH	T: winged	F: KicB	ECOD (1.6)
L [auth D2]	MukF_C	e7nz2D23	A: alpha arrays	X: HTH	H: HTH	T: winged	F: MukF_C	ECOD (1.6)
L [auth D2]	MukF_M	e7nz2D21	A: alpha bundles	X: STAT-like	H: MukF C-terminal domain-like (From Topology)	T: MukF C-terminal domain-like	F: MukF_M	ECOD (1.6)
K [auth D1]	KicB	e7nz2D12	A: alpha arrays	X: HTH	H: HTH	T: winged	F: KicB	ECOD (1.6)
K [auth D1]	MukF_C	e7nz2D13	A: alpha arrays	X: HTH	H: HTH	T: winged	F: MukF_C	ECOD (1.6)
K [auth D1]	MukF_M	e7nz2D11	A: alpha bundles	X: STAT-like	H: MukF C-terminal domain-like (From Topology)	T: MukF C-terminal domain-like	F: MukF_M	ECOD (1.6)
J [auth C2]	KicB	e7nz2C22	A: alpha arrays	X: HTH	H: HTH	T: winged	F: KicB	ECOD (1.6)
J [auth C2]	MukF_C	e7nz2C23	A: alpha arrays	X: HTH	H: HTH	T: winged	F: MukF_C	ECOD (1.6)
J [auth C2]	MukF_M	e7nz2C21	A: alpha bundles	X: STAT-like	H: MukF C-terminal domain-like (From Topology)	T: MukF C-terminal domain-like	F: MukF_M	ECOD (1.6)
I [auth C1]	KicB	e7nz2C12	A: alpha arrays	X: HTH	H: HTH	T: winged	F: KicB	ECOD (1.6)
I [auth C1]	MukF_C	e7nz2C13	A: alpha arrays	X: HTH	H: HTH	T: winged	F: MukF_C	ECOD (1.6)
I [auth C1]	MukF_M	e7nz2C11	A: alpha bundles	X: STAT-like	H: MukF C-terminal domain-like (From Topology)	T: MukF C-terminal domain-like	F: MukF_M	ECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
MA [auth L1], NA [auth L2], OA [auth M1], PA [auth M2]	matS2 DNA 80 b, oligo FBA770	-	-	-
KA [auth K1], LA [auth K2], QA [auth N1], RA [auth N2]	matS2 DNA 80 b, oligo FBA769	-	-	-
CA [auth I1], DA [auth I2], EA [auth I3], FA [auth I4], GA [auth J1], CA [auth I1], DA [auth I2], EA [auth I3], FA [auth I4], GA [auth J1], HA [auth J2], IA [auth J3], JA [auth J4]	Macrodomain Ter protein	sequence-specific DNA binding DNA binding binding nucleic acid binding	regulation of cellular process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of cellular process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process cellular process metabolic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription macromolecule metabolic process regulation of metabolic process cell division	cellular anatomical structure intracellular anatomical structure cytoplasm
AA [auth H3], BA [auth H4], U [auth G1], V [auth G2], W [auth G3], AA [auth H3], BA [auth H4], U [auth G1], V [auth G2], W [auth G3], X [auth G4], Y [auth H1], Z [auth H2]	Acyl carrier protein	-	-	-
M [auth E1], N [auth E2], O [auth E3], P [auth E4], Q [auth F1], M [auth E1], N [auth E2], O [auth E3], P [auth E4], Q [auth F1], R [auth F2], S [auth F3], T [auth F4]	Chromosome partition protein MukE	-	nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process cell division cell cycle chromosome segregation cell cycle process cellular component organization organelle organization nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process cell division cell cycle chromosome segregation cell cycle process cellular component organization organelle organization chromosome condensation chromosome organization cellular component organization or biogenesis	cellular anatomical structure nucleoid intracellular anatomical structure cytoplasm
I [auth C1], J [auth C2], K [auth D1], L [auth D2]	Chromosome partition protein MukF	cation binding ion binding binding calcium ion binding metal ion binding small molecule binding	nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process cell division cell cycle chromosome segregation cell cycle process cellular component organization organelle organization nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process cell division cell cycle chromosome segregation cell cycle process cellular component organization organelle organization chromosome condensation chromosome organization cellular component organization or biogenesis	cellular anatomical structure nucleoid intracellular anatomical structure cytoplasm
A [auth A1], B [auth A2], C [auth A3], D [auth A4], E [auth B1], A [auth A1], B [auth A2], C [auth A3], D [auth A4], E [auth B1], F [auth B2], G [auth B3], H [auth B4]	Chromosome partition protein MukB	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding DNA binding nucleic acid binding	nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process cell division cell cycle chromosome segregation cell cycle process cellular component organization organelle organization nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process cell division cell cycle chromosome segregation cell cycle process cellular component organization organelle organization chromosome condensation chromosome organization cellular component organization or biogenesis	cellular anatomical structure nucleoid intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
CA [auth I1], DA [auth I2], EA [auth I3], FA [auth I4], GA [auth J1], CA [auth I1], DA [auth I2], EA [auth I3], FA [auth I4], GA [auth J1], HA [auth J2], IA [auth J3], JA [auth J4]	IPR013321	Arc-type ribbon-helix-helix	Homologous Superfamily
CA [auth I1], DA [auth I2], EA [auth I3], FA [auth I4], GA [auth J1], CA [auth I1], DA [auth I2], EA [auth I3], FA [auth I4], GA [auth J1], HA [auth J2], IA [auth J3], JA [auth J4]	IPR009390	Macrodomain Ter protein, MatP	Family
CA [auth I1], DA [auth I2], EA [auth I3], FA [auth I4], GA [auth J1], CA [auth I1], DA [auth I2], EA [auth I3], FA [auth I4], GA [auth J1], HA [auth J2], IA [auth J3], JA [auth J4]	IPR035375	MatP, C-terminal ribbon-helix-helix domain	Domain
CA [auth I1], DA [auth I2], EA [auth I3], FA [auth I4], GA [auth J1], CA [auth I1], DA [auth I2], EA [auth I3], FA [auth I4], GA [auth J1], HA [auth J2], IA [auth J3], JA [auth J4]	IPR038339	MatP, N-terminal domain superfamily	Homologous Superfamily
CA [auth I1], DA [auth I2], EA [auth I3], FA [auth I4], GA [auth J1], CA [auth I1], DA [auth I2], EA [auth I3], FA [auth I4], GA [auth J1], HA [auth J2], IA [auth J3], JA [auth J4]	IPR035087	MatP, N-terminal	Domain
M [auth E1], N [auth E2], O [auth E3], P [auth E4], Q [auth F1], M [auth E1], N [auth E2], O [auth E3], P [auth E4], Q [auth F1], R [auth F2], S [auth F3], T [auth F4]	IPR042038	MukE, N-terminal domain	Homologous Superfamily
M [auth E1], N [auth E2], O [auth E3], P [auth E4], Q [auth F1], M [auth E1], N [auth E2], O [auth E3], P [auth E4], Q [auth F1], R [auth F2], S [auth F3], T [auth F4]	IPR042037	MukE, C-terminal domain	Homologous Superfamily
M [auth E1], N [auth E2], O [auth E3], P [auth E4], Q [auth F1], M [auth E1], N [auth E2], O [auth E3], P [auth E4], Q [auth F1], R [auth F2], S [auth F3], T [auth F4]	IPR007385	Prokaryotic chromosome segregation/condensation protein MukE	Family
I [auth C1], J [auth C2], K [auth D1], L [auth D2]	IPR005582	Chromosome partition protein MukF	Family
I [auth C1], J [auth C2], K [auth D1], L [auth D2]	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
I [auth C1], J [auth C2], K [auth D1], L [auth D2]	IPR036141	MukF, middle domain superfamily	Homologous Superfamily
I [auth C1], J [auth C2], K [auth D1], L [auth D2]	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily
I [auth C1], J [auth C2], K [auth D1], L [auth D2]	IPR033439	Chromosome partition protein MukF, winged-helix domain	Domain
I [auth C1], J [auth C2], K [auth D1], L [auth D2]	IPR038198	MukF, C-terminal domain superfamily	Homologous Superfamily
I [auth C1], J [auth C2], K [auth D1], L [auth D2]	IPR033441	Chromosome partition protein MukF, C-terminal domain	Domain
I [auth C1], J [auth C2], K [auth D1], L [auth D2]	IPR033440	Chromosome partition protein MukF, middle domain	Domain
A [auth A1], B [auth A2], C [auth A3], D [auth A4], E [auth B1], A [auth A1], B [auth A2], C [auth A3], D [auth A4], E [auth B1], F [auth B2], G [auth B3], H [auth B4]	IPR042501	MukB, hinge domain superfamily	Homologous Superfamily
A [auth A1], B [auth A2], C [auth A3], D [auth A4], E [auth B1], A [auth A1], B [auth A2], C [auth A3], D [auth A4], E [auth B1], F [auth B2], G [auth B3], H [auth B4]	IPR050308	Chromosome partition protein MukB/SMC	Family
A [auth A1], B [auth A2], C [auth A3], D [auth A4], E [auth B1], A [auth A1], B [auth A2], C [auth A3], D [auth A4], E [auth B1], F [auth B2], G [auth B3], H [auth B4]	IPR007406	MukB, N-terminal domain	Domain
A [auth A1], B [auth A2], C [auth A3], D [auth A4], E [auth B1], A [auth A1], B [auth A2], C [auth A3], D [auth A4], E [auth B1], F [auth B2], G [auth B3], H [auth B4]	IPR032520	MukB, hinge domain	Domain
A [auth A1], B [auth A2], C [auth A3], D [auth A4], E [auth B1], A [auth A1], B [auth A2], C [auth A3], D [auth A4], E [auth B1], F [auth B2], G [auth B3], H [auth B4]	IPR012090	Chromosome partition protein MukB	Family
A [auth A1], B [auth A2], C [auth A3], D [auth A4], E [auth B1], A [auth A1], B [auth A2], C [auth A3], D [auth A4], E [auth B1], F [auth B2], G [auth B3], H [auth B4]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily