7NST
ColicinE9 partial translocation complex
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Porins | 8033399 | 3000224 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Porins | 8033399 | 3000224 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Porins | 8033399 | 3000224 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | YWTD domain-like | 8042387 | 3000494 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | TolB N-terminal domain-like | 8042388 | 3000482 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00267 | e7nstA1 | A: beta barrels | X: Outer membrane meander beta-barrels | H: Porins | T: Porin | F: PF00267 | ECOD (1.6) |
B | PF00267 | e7nstB1 | A: beta barrels | X: Outer membrane meander beta-barrels | H: Porins | T: Porin | F: PF00267 | ECOD (1.6) |
C | PF00267 | e7nstC1 | A: beta barrels | X: Outer membrane meander beta-barrels | H: Porins | T: Porin | F: PF00267 | ECOD (1.6) |
E | PF07676 | e7nstE1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 6-bladed | F: PF07676 | ECOD (1.6) |
E | PF04052 | e7nstE2 | A: a/b three-layered sandwiches | X: TolB, N-terminal domain (From Topology) | H: TolB, N-terminal domain (From Topology) | T: TolB, N-terminal domain | F: PF04052 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00267 | Gram-negative porin (Porin_1) | Gram-negative porin | - | Domain | |
PF03515 | Colicin-like bacteriocin tRNase domain (Cloacin) | Colicin-like bacteriocin tRNase domain | - | Family | |
PF04052 | TolB amino-terminal domain (TolB_N) | TolB amino-terminal domain | TolB is an essential periplasmic component of the tol-dependent translocation system. This function of this amino terminal domain is uncertain. | Domain | |
PF07676 | WD40-like Beta Propeller Repeat (PD40) | WD40-like Beta Propeller Repeat | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001897 | Porin, gammaproteobacterial | Family | |
IPR033900 | Porin domain, Gram-negative type | Domain | |
IPR023614 | Porin domain superfamily | Homologous Superfamily | |
IPR001702 | Porin, Gram-negative type | Family | |
IPR013793 | Porin, Gram-negative type, conserved site | Conserved Site | |
IPR024575 | Cloacin/colicin | Family | |
IPR016128 | Pyosin/cloacin translocation domain | Domain | |
IPR044925 | His-Me finger superfamily | Homologous Superfamily | |
IPR024566 | Colicin, receptor domain | Domain | |
IPR036302 | Pyosin/cloacin translocation domain superfamily | Homologous Superfamily | |
IPR037146 | Colicin/pyocin, DNase domain superfamily | Homologous Superfamily | |
IPR011042 | Six-bladed beta-propeller, TolB-like | Homologous Superfamily | |
IPR007195 | TolB, N-terminal | Domain | |
IPR011659 | WD40-like beta propeller | Repeat | |
IPR014167 | Tol-Pal system protein TolB | Family |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Beta-barrel transmembrane | Trimeric porins (n=16,S=20) | General Bacterial Porin (GBP) |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: BETA-BARREL | Beta-Barrel Membrane Proteins: Porins and Relatives | OmpF and BtuB Porin in complex with colicin E9 (colE9) |