7NQL

55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
M [auth BN]SCOP2B SuperfamilyRibosomal protein L138098010 3001134 SCOP2B (2022-06-29)
P [auth BQ]SCOP2B SuperfamilyRibosomal protein L16p/L10e8076055 3000884 SCOP2B (2022-06-29)
S [auth BT]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8089132 3000334 SCOP2B (2022-06-29)
U [auth BV]SCOP2B Superfamilyl21p-like8082451 3002005 SCOP2B (2022-06-29)
X [auth BY]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8082519 3000334 SCOP2B (2022-06-29)
C [auth B9]SCOP2B SuperfamilyRibosomal protein L368083322 3001346 SCOP2B (2022-06-29)
YA [auth AB]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8063848 3001397 SCOP2B (2022-06-29)
FB [auth AK]SCOP2B SuperfamilyTranslational machinery components8096616 3000571 SCOP2B (2022-06-29)
GB [auth AL]SCOP2B SuperfamilyNucleic acid-binding proteins8096284 3000135 SCOP2B (2022-06-29)
HB [auth AN]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052589 3000068 SCOP2B (2022-06-29)
NB [auth AU]SCOP2B SuperfamilyRibosomal protein S218083456 3002159 SCOP2B (2022-06-29)
RB [auth Aa]SCOP2B SuperfamilyMitochondrial 28S ribosomal protein S22-like8096620 3002074 SCOP2B (2022-06-29)
YB [auth Ah]SCOP2B SuperfamilyMitochondrial 28S ribosomal protein S31-like8090912 3002471 SCOP2B (2022-06-29)
AC [auth Aj]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8104445 3000334 SCOP2B (2022-06-29)
H [auth BF]SCOP2B SuperfamilyRibosomal protein L48096626 3001146 SCOP2B (2022-06-29)
I [auth BI]SCOP2B SuperfamilyL9 N-domain-like8070579 3000338 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth B7]PF00468e7nqlB71 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: PF00468ECOD (1.6)
K [auth BK]PF00298e7nqlBK2 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: PF00298ECOD (1.6)
K [auth BK]PF03946e7nqlBK1 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: PF03946ECOD (1.6)
L [auth BL]PF00472e7nqlBL1 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: PF00472ECOD (1.6)
M [auth BN]PF00572e7nqlBN1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
N [auth BO]PF00238e7nqlBO1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
O [auth BP]PF00828e7nqlBP1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
P [auth BQ]PF00252e7nqlBQ1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
Q [auth BR]PF01196e7nqlBR1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: PF01196ECOD (1.6)
R [auth BS]PF00861e7nqlBS1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00861ECOD (1.6)
S [auth BT]PF01245e7nqlBT1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01245ECOD (1.6)
B [auth B8]PF01632e7nqlB81 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: PF01632ECOD (1.6)
T [auth BU]PF00453e7nqlBU1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: PF00453ECOD (1.6)
U [auth BV]PF00829e7nqlBV1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: PF00829ECOD (1.6)
V [auth BW]PF00237e7nqlBW1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
W [auth BX]PF00276e7nqlBX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276ECOD (1.6)
X [auth BY]PF00467,PF17136e7nqlBY1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF17136ECOD (1.6)
Y [auth Ba]PF07147e7nqlBa1 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: PF07147ECOD (1.6)
Z [auth Bb]PF01161e7nqlBb1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: PEBP-likeF: PF01161ECOD (1.6)
AA [auth Bc]PF02824e7nqlBc1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: PF02824ECOD (1.6)
AA [auth Bc]F_UNCLASSIFIEDe7nqlBc2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: ThrRS/AlaRS editing domainF: F_UNCLASSIFIEDECOD (1.6)
BA [auth Bd]PF09812e7nqlBd1 A: extended segmentsX: Mitochondrial 54S ribosomal protein L28 (From Topology)H: Mitochondrial 54S ribosomal protein L28 (From Topology)T: Mitochondrial 54S ribosomal protein L28F: PF09812ECOD (1.6)
CA [auth Be]PF09809e7nqlBe1 A: extended segmentsX: Mitochondrial 54S ribosomal protein L27 (From Topology)H: Mitochondrial 54S ribosomal protein L27 (From Topology)T: Mitochondrial 54S ribosomal protein L27F: PF09809ECOD (1.6)
C [auth B9]PF00444e7nqlB91 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: PF00444ECOD (1.6)
DA [auth Bf]PF10210e7nqlBf1 A: extended segmentsX: Mitoribosomal protein mL42 (From Topology)H: Mitoribosomal protein mL42 (From Topology)T: Mitoribosomal protein mL42F: PF10210ECOD (1.6)
EA [auth Bg]PF05047e7nqlBg1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: PF05047ECOD (1.6)
FA [auth Bh]PF22935e7nqlBh1 A: alpha arraysX: RNase III catalytic domain-like (From Topology)H: RNase III catalytic domain-like (From Topology)T: RNase III catalytic domain-likeF: PF22935ECOD (1.6)
FA [auth Bh]PF22892e7nqlBh2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF22892ECOD (1.6)
GA [auth Bi]PF04280e7nqlBi1 A: a+b two layersX: Cystatin-likeH: NTF2-like (From Topology)T: NTF2-likeF: PF04280ECOD (1.6)
HA [auth Bj]PF11788e7nqlBj1 A: a+b two layersX: beta-GraspH: Nudix (From Topology)T: NudixF: PF11788ECOD (1.6)
IA [auth Bk]PF00338e7nqlBk1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
JA [auth Bl]PF05046e7nqlBl1 A: a+b two layersX: Glucose permease domain IIB-likeH: eIF1-like (From Topology)T: eIF1-likeF: PF05046ECOD (1.6)
KA [auth Bm]PF10501e7nqlBm1 A: alpha bundlesX: ACP-likeH: Acyl-carrier protein (ACP) (From Topology)T: Acyl-carrier protein (ACP)F: PF10501ECOD (1.6)
LA [auth Bn]PF10244e7nqlBn1 A: alpha bundlesX: Long alpha-hairpinH: Mitoribosomal protein mL51 (From Topology)T: Mitoribosomal protein mL51F: PF10244ECOD (1.6)
MA [auth Bo]PF18699e7nqlBo1 A: extended segmentsX: Mitoribosomal protein mL52 (From Topology)H: Mitoribosomal protein mL52 (From Topology)T: Mitoribosomal protein mL52F: PF18699ECOD (1.6)
NA [auth Bp]PF10780e7nqlBp1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: PF10780ECOD (1.6)
PA [auth Bt]PF14978e7nqlBt1 A: extended segmentsX: Mitoribosomal protein mL63 (From Topology)H: Mitoribosomal protein mL63 (From Topology)T: Mitoribosomal protein mL63F: PF14978ECOD (1.6)
QA [auth Bu]PF00472e7nqlBu1 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: PF00472ECOD (1.6)
RA [auth Bv]PF10147e7nqlBv1 A: extended segmentsX: Mitochondrial 54S ribosomal protein L25 (From Topology)H: Mitochondrial 54S ribosomal protein L25 (From Topology)T: Mitochondrial 54S ribosomal protein L25F: PF10147ECOD (1.6)
SA [auth Bw]PF07147e7nqlBw1 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: PF07147ECOD (1.6)
TA [auth Bx]PF01084e7nqlBx1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF01084ECOD (1.6)
GC [auth GL]PF16320e7nqlGL1 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: PF16320ECOD (1.6)
HC [auth HL]PF16320e7nqlHL1 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: PF16320ECOD (1.6)
LB [auth FL]PF16320e7nqlFL1 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: PF16320ECOD (1.6)
VA [auth CL]PF16320e7nqlCL1 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: PF16320ECOD (1.6)
WA [auth DL]PF16320e7nqlDL1 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: PF16320ECOD (1.6)
XA [auth EL]PF16320e7nqlEL1 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: PF16320ECOD (1.6)
YA [auth AB]PF00318e7nqlAB1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
ZA [auth AC]PF14955e7nqlAC1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF14955ECOD (1.6)
AB [auth AE]PF03719e7nqlAE2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
AB [auth AE]PF00333e7nqlAE1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
AB [auth AE]PF21251e7nqlAE3 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: PF21251ECOD (1.6)
BB [auth AF]PF01250e7nqlAF1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: PF01250ECOD (1.6)
CB [auth AG]PF00177e7nqlAG1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
DB [auth AI]PF00380e7nqlAI1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
EB [auth AJ]PF00338e7nqlAJ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
FB [auth AK]PF00411e7nqlAK1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
GB [auth AL]PF00164e7nqlAL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
HB [auth AN]PF00253e7nqlAN1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
IB [auth AO]PF00312e7nqlAO1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
F [auth BD]PF00181e7nqlBD1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
F [auth BD]PF03947e7nqlBD2 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
JB [auth AP]PF00886e7nqlAP1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: PF00886ECOD (1.6)
KB [auth AQ]PF00366e7nqlAQ1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366ECOD (1.6)
MB [auth AR]PF01084e7nqlAR1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF01084ECOD (1.6)
NB [auth AU]PF01165e7nqlAU1 A: extended segmentsX: 30S ribosomal protein S21 (From Topology)H: 30S ribosomal protein S21 (From Topology)T: 30S ribosomal protein S21F: PF01165ECOD (1.6)
RB [auth Aa]PF10245e7nqlAa1 A: a+b complex topologyX: Mitoribosomal protein mS22 (From Topology)H: Mitoribosomal protein mS22 (From Topology)T: Mitoribosomal protein mS22F: PF10245ECOD (1.6)
SB [auth Ab]PF10484e7nqlAb1 A: alpha arraysX: RuvA-CH: Mitoribosomal protein mS23 (From Topology)T: Mitoribosomal protein mS23F: PF10484ECOD (1.6)
TB [auth Ac]PF05047e7nqlAc1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: PF05047ECOD (1.6)
G [auth BE]PF00297e7nqlBE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
UB [auth Ad]PF14943e7nqlAd1 A: extended segmentsX: Mitoribosomal protein mS26 (From Topology)H: Mitoribosomal protein mS26 (From Topology)T: Mitoribosomal protein mS26F: PF14943ECOD (1.6)
VB [auth Ae]PF10037e7nqlAe1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: PF10037ECOD (1.6)
WB [auth Af]PF10246e7nqlAf1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF10246ECOD (1.6)
XB [auth Ag]PF10236e7nqlAg2 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF10236ECOD (1.6)
XB [auth Ag]PF10236e7nqlAg1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF10236ECOD (1.6)
YB [auth Ah]PF15433e7nqlAh1 A: extended segmentsX: Mitoribosomal protein mS31 (From Topology)H: Mitoribosomal protein mS31 (From Topology)T: Mitoribosomal protein mS31F: PF15433ECOD (1.6)
ZB [auth Ai]PF08293e7nqlAi1 A: extended segmentsX: Mitoribosomal protein mS33 (From Topology)H: Mitoribosomal protein mS33 (From Topology)T: Mitoribosomal protein mS33F: PF08293ECOD (1.6)
AC [auth Aj]PF16053e7nqlAj1 A: beta barrelsX: SH3H: Mitoribosomal protein mS34 (From Topology)T: Mitoribosomal protein mS34F: PF16053ECOD (1.6)
BC [auth Ak]PF10213e7nqlAk1 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: PF10213ECOD (1.6)
CC [auth Am]PF06747e7nqlAm1 A: few secondary structure elementsX: p8-MTCP1-related (From Topology)H: p8-MTCP1-related (From Topology)T: p8-MTCP1-relatedF: PF06747ECOD (1.6)
DC [auth An]PF08213e7nqlAn1 A: extended segmentsX: Mitoribosomal protein mS38 (From Topology)H: Mitoribosomal protein mS38 (From Topology)T: Mitoribosomal protein mS38F: PF08213ECOD (1.6)
H [auth BF]PF00573e7nqlBF1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
FC [auth Ap]PF01084e7nqlAp1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF01084ECOD (1.6)
IC [auth B0]PF01016e7nqlB01 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: PF01016ECOD (1.6)
JC [auth B1]PF00830e7nqlB11 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Mitoribosomal protein bL28mF: PF00830ECOD (1.6)
KC [auth B2]PF06984e7nqlB21 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF06984ECOD (1.6)
LC [auth B3]PF00327e7nqlB31 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327ECOD (1.6)
MC [auth B4]PF09776e7nqlB41 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: PF09776ECOD (1.6)
NC [auth B5]PF01783e7nqlB51 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01783ECOD (1.6)
OC [auth B6]PF00471e7nqlB61 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00471ECOD (1.6)
I [auth BI]PF01281e7nqlBI1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: PF01281ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth B7]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
J [auth BJ]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
K [auth BK]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
L [auth BL]PF00472RF-1 domain (RF-1)RF-1 domain- Family
M [auth BN]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
N [auth BO]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
O [auth BP]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
P [auth BQ]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
Q [auth BR]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
R [auth BS]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
S [auth BT]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
T [auth BU]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
U [auth BV]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
V [auth BW]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
W [auth BX]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
X [auth BY]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
X [auth BY]PF00467KOW motif (KOW)KOW motif- Family
Y [auth Ba]PF07147Mitochondrial 28S ribosomal protein S30 (PDCD9) (PDCD9)Mitochondrial 28S ribosomal protein S30 (PDCD9)- Family
Z [auth Bb]PF01161Phosphatidylethanolamine-binding protein (PBP)Phosphatidylethanolamine-binding protein- Domain
BA [auth Bd]PF09812Mitochondrial ribosomal protein L28 (MRP-L28)Mitochondrial ribosomal protein L28- Family
CA [auth Be]PF09809Mitochondrial ribosomal protein L27 (MRP-L27)Mitochondrial ribosomal protein L27- Family
C [auth B9]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36- Domain
DA [auth Bf]PF10210Mitochondrial 28S ribosomal protein S32 (MRP-S32)Mitochondrial 28S ribosomal protein S32- Family
EA [auth Bg]PF05047Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)Mitochondrial ribosomal protein L51 / S25 / CI-B8 domainThe proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.
Domain
GA [auth Bi]PF04280Tim44-like domain (Tim44)Tim44-like domainTim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostati ...Tim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostatic interactions and by penetrating the polar head group region [1]. This family includes the C-terminal region of Tim44 that has been shown to form a stable proteolytic fragment in yeast. This region is also found in a set of smaller bacterial proteins. The molecular function of the bacterial members of this family is unknown but transport seems likely. The crystal structure of the C terminal of Tim44 has revealed a large hydrophobic pocket which might play an important role in interacting with the acyl chains of lipid molecules in the mitochondrial membrane [3].
Domain
HA [auth Bj]PF1178839S mitochondrial ribosomal protein L46 (MRP-L46)39S mitochondrial ribosomal protein L46- Family
IA [auth Bk]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
JA [auth Bl]PF05046Mitochondrial large subunit ribosomal protein (Img2) (Img2)Mitochondrial large subunit ribosomal protein (Img2)This family of proteins have been identified as part of the mitochondrial large ribosomal subunit in yeast [1].Domain
KA [auth Bm]PF10501Ribosomal subunit 39S (Ribosomal_L50)Ribosomal subunit 39SThe 39S ribosomal protein appears to be a subunit of one of the larger mitochondrial 66S or 70S units [1]. Under conditions of ethanol-stress in rats the larger subunit is largely dissociated into its smaller components [2]. In E. coli, in the absenc ...The 39S ribosomal protein appears to be a subunit of one of the larger mitochondrial 66S or 70S units [1]. Under conditions of ethanol-stress in rats the larger subunit is largely dissociated into its smaller components [2]. In E. coli, in the absence of the enzyme pseudouridine synthase (RluD) synthase, there is an accumulation of 50S and 30S subunits and the appearance of abnormal particles (62S and 39S), with concomitant loss of 70S ribosomes [2].
Domain
LA [auth Bn]PF10244Mitochondrial ribosomal subunit (MRP-L51)Mitochondrial ribosomal subunit- Family
MA [auth Bo]PF18699Mitoribosomal protein mL52 (MRPL52)Mitoribosomal protein mL52- Family
NA [auth Bp]PF1078039S ribosomal protein L53/MRP-L53 (MRP_L53)39S ribosomal protein L53/MRP-L53- Family
OA [auth Bq]PF08561Mitochondrial ribosomal protein L37 (Ribosomal_L37)Mitochondrial ribosomal protein L37- Family
PA [auth Bt]PF14978Mitochondrial ribosome protein 63 (MRP-63)Mitochondrial ribosome protein 63- Family
QA [auth Bu]PF00472RF-1 domain (RF-1)RF-1 domain- Family
RA [auth Bv]PF10147Growth arrest and DNA-damage-inducible proteins-interacting protein 1 (CR6_interact)Growth arrest and DNA-damage-inducible proteins-interacting protein 1- Family
SA [auth Bw]PF07147Mitochondrial 28S ribosomal protein S30 (PDCD9) (PDCD9)Mitochondrial 28S ribosomal protein S30 (PDCD9)- Family
TA [auth Bx]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
PF16320Ribosomal protein L7/L12 dimerisation domain (Ribosomal_L12_N)Ribosomal protein L7/L12 dimerisation domainThis is the N-terminal dimerisation domain of ribosomal protein L7/L12 [1].Domain
YA [auth AB]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
ZA [auth AC]PF14955Mitochondrial ribosome subunit S24 (MRP-S24)Mitochondrial ribosome subunit S24- Family
AB [auth AE]PF2125140S ribosomal protein rpS2 (S5p), N-terminal (S5p_N)40S ribosomal protein rpS2 (S5p), N-terminalThis entry represents an extension found at the N-terminal of mammalian 28S ribosomal protein S5 [1,2]. This lines a part of the mRNA entry path and connects the 28S subunit body to the head forming a latch across the mRNA channel entrance [2].Domain
AB [auth AE]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
AB [auth AE]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
BB [auth AF]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
CB [auth AG]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
DB [auth AI]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
EB [auth AJ]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
FB [auth AK]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
GB [auth AL]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
HB [auth AN]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
F [auth BD]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
JB [auth AP]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
KB [auth AQ]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
MB [auth AR]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
NB [auth AU]PF01165Ribosomal protein S21 (Ribosomal_S21)Ribosomal protein S21- Family
RB [auth Aa]PF10245Mitochondrial 28S ribosomal protein S22 (MRP-S22)Mitochondrial 28S ribosomal protein S22- Family
SB [auth Ab]PF10484Mitochondrial ribosomal protein S23 (MRP-S23)Mitochondrial ribosomal protein S23- Family
TB [auth Ac]PF05047Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)Mitochondrial ribosomal protein L51 / S25 / CI-B8 domainThe proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.
Domain
G [auth BE]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
VB [auth Ae]PF10037Mitochondrial 28S ribosomal protein S27 (MRP-S27)Mitochondrial 28S ribosomal protein S27- Repeat
WB [auth Af]PF10246Mitochondrial ribosomal protein MRP-S35 (MRP-S35)Mitochondrial ribosomal protein MRP-S35- Family
XB [auth Ag]PF10236Mitochondrial ribosomal death-associated protein 3 (DAP3)Mitochondrial ribosomal death-associated protein 3- Family
YB [auth Ah]PF15433Mitochondrial 28S ribosomal protein S31 (MRP-S31)Mitochondrial 28S ribosomal protein S31- Family
ZB [auth Ai]PF08293Mitochondrial ribosomal subunit S27 (MRP-S33)Mitochondrial ribosomal subunit S27- Family
AC [auth Aj]PF16053Mitochondrial 28S ribosomal protein S34 (MRP-S34)Mitochondrial 28S ribosomal protein S34- Family
BC [auth Ak]PF10213Mitochondrial ribosomal subunit protein (MRP-S28)Mitochondrial ribosomal subunit protein- Family
CC [auth Am]PF06747CHCH domain (CHCH)CHCH domainwe have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extende ...we have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extended) and C (C-terminal extended) subgroups. All three sub-groups of proteins have in common that they contain a predicted conserved [coiled coil 1]-[helix 1]-[coiled coil 2]-[helix 2] domain (CHCH domain). Within each helix of the CHCH domain, there are two cysteines present in a C-X9-C motif. The N-group contains an additional double helix domain, and each helix contains the C-X9-C motif. This family contains a number of characterised proteins: Cox19 protein - a nuclear gene of Saccharomyces cerevisiae, codes for an 11-kDa protein (Cox19p) required for expression of cytochrome oxidase. Because cox19 mutants are able to synthesise the mitochondrial and nuclear gene products of cytochrome oxidase, Cox19p probably functions post-translationally during assembly of the enzyme. Cox19p is present in the cytoplasm and mitochondria, where it exists as a soluble intermembrane protein. This dual location is similar to what was previously reported for Cox17p, a low molecular weight copper protein thought to be required for maturation of the CuA centre of subunit 2 of cytochrome oxidase. Cox19p have four conserved potential metal ligands, these are three cysteines and one histidine. Mrp10 - belongs to the class of yeast mitochondrial ribosomal proteins that are essential for translation [2]. Eukaryotic NADH-ubiquinone oxidoreductase 19 kDa (NDUFA8) subunit [3]. The CHCH domain was previously called DUF657 [4].
Domain
DC [auth An]PF08213Mitochondrial mRNA-processing protein COX24, C-terminal (COX24_C)Mitochondrial mRNA-processing protein COX24, C-terminalThis domain of unknown function is found at the C terminal end of Mitochondrial small ribosomal subunit protein mS38, also known as Mitochondrial mRNA-processing protein COX24 in yeast which is involved in the splicing of the COX1 mRNA [1]. COX24 is ...This domain of unknown function is found at the C terminal end of Mitochondrial small ribosomal subunit protein mS38, also known as Mitochondrial mRNA-processing protein COX24 in yeast which is involved in the splicing of the COX1 mRNA [1]. COX24 is a component of the mitochondrial ribosome (mitoribosome), responsible for the synthesis of mitochondrial genome-encoded proteins, including at least some of the essential transmembrane subunits of the mitochondrial respiratory chain. The mitoribosomes are attached to the mitochondrial inner membrane and translation products are cotranslationally integrated into the membrane [2,3]. This domain is also found in COX24 mammalian homologue Aurora kinase A-interacting protein [4]. This entry also includes uncharacterised proteins from bacteria.
Domain
H [auth BF]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
EC [auth Ao]PF13812Pentatricopeptide repeat domain (PPR_3)Pentatricopeptide repeat domain- Repeat
FC [auth Ap]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
IC [auth B0]PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
JC [auth B1]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
KC [auth B2]PF06984Mitochondrial 39-S ribosomal protein L47 (MRP-L47) (MRP-L47)Mitochondrial 39-S ribosomal protein L47 (MRP-L47)- Family
LC [auth B3]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
MC [auth B4]PF09776Mitochondrial ribosomal protein L55 (Mitoc_L55)Mitochondrial ribosomal protein L55- Family
NC [auth B5]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
OC [auth B6]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
I [auth BI]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth B7]Mitochondrial ribosomal protein L34
J [auth BJ]Mitochondrial ribosomal protein L10- -
K [auth BK]Mitochondrial ribosomal protein L11
L [auth BL]Peptidyl-tRNA hydrolase ICT1, mitochondrial
M [auth BN]uL13m
N [auth BO]uL14m
O [auth BP]uL15m---
P [auth BQ]uL16m
Q [auth BR]bL17m
R [auth BS]Mitochondrial ribosomal protein L18
S [auth BT]Mitochondrial ribosomal protein L19
B [auth B8]Mitochondrial ribosomal protein L35- -
T [auth BU]Mitochondrial ribosomal protein L20
U [auth BV]Mitochondrial ribosomal protein L21
V [auth BW]uL22m
W [auth BX]uL23m---
X [auth BY]uL24m
Y [auth Ba]Mitochondrial ribosomal protein L37
Z [auth Bb]Mitochondrial ribosomal protein L38- -
AA [auth Bc]Mitochondrial ribosomal protein L39 - -
BA [auth Bd]Mitochondrial ribosomal protein L40- -
CA [auth Be]Mitochondrial ribosomal protein L41
C [auth B9]Ribosomal protein
DA [auth Bf]mL42- -
EA [auth Bg]Mitochondrial ribosomal protein L43
FA [auth Bh]mL44
GA [auth Bi]Mitochondrial ribosomal protein L45- -
HA [auth Bj]Mitochondrial ribosomal protein L46 -
IA [auth Bk]39S ribosomal protein L48, mitochondrial- -
JA [auth Bl]Mrpl34
KA [auth Bm]Mitochondrial ribosomal protein L50- -
LA [auth Bn]Mitochondrial ribosomal protein L51
MA [auth Bo]mL52
D [auth BA]16S rRNA---
NA [auth Bp]mL53- -
OA [auth Bq]mL54 -
PA [auth Bt]Mitochondrial ribosomal protein L57
QA [auth Bu]mL62 (ICT1)
RA [auth Bv]mL64-
SA [auth Bw]39S ribosomal protein S30, mitochondrial
TA [auth Bx]Mitochondrial ribosomal protein S18A
UA [auth AA]12S rRNA---
Mitochondrial ribosomal protein L12
YA [auth AB]Mitochondrial ribosomal protein S2
E [auth BB]CP tRNAPhe---
ZA [auth AC]Mitochondrial ribosomal protein S24- -
AB [auth AE]Mitochondrial ribosomal protein S5
BB [auth AF]bS6m---
CB [auth AG]Mitochondrial ribosomal protein S7
DB [auth AI]uS9m
EB [auth AJ]Mitochondrial ribosomal protein S10- -
FB [auth AK]uS11m
GB [auth AL]Mitochondrial ribosomal protein S12
HB [auth AN]Mitochondrial ribosomal protein S14
IB [auth AO]uS15m
F [auth BD]uL2m
JB [auth AP]28S ribosomal protein S16, mitochondrial
KB [auth AQ]uS17m
MB [auth AR]Mitochondrial ribosomal protein S18C
NB [auth AU]bS21m
OB [auth AV]fMet-tRNAMet (P site)---
PB [auth AX]mRNA---
QB [auth AZ]unknown---
RB [auth Aa]Mitochondrial ribosomal protein S22 -
SB [auth Ab]mS23
TB [auth Ac]Mitochondrial ribosomal protein S25 -
G [auth BE]ICT1
UB [auth Ad]Mitochondrial ribosomal protein S26
VB [auth Ae]Mitochondrial ribosomal protein S27- -
WB [auth Af]Mitoribosomal protein ms28, mrps28-
XB [auth Ag]Death associated protein 3-
YB [auth Ah]Mitochondrial ribosomal protein S31 -
ZB [auth Ai]mS33- -
AC [auth Aj]mS34
BC [auth Ak]Mitochondrial ribosomal protein S35
CC [auth Am]mS37-
DC [auth An]Aurora kinase A interacting protein 1-
H [auth BF]Mitochondrial ribosomal protein L4
EC [auth Ao]Pentatricopeptide repeat domain 3
FC [auth Ap]28S ribosomal protein S18b, mitochondrial
IC [auth B0]Mitochondrial ribosomal protein L27
JC [auth B1]Mitochondrial ribosomal protein L28 -
KC [auth B2]Mitochondrial ribosomal protein L47
LC [auth B3]uL30m
MC [auth B4]bL31m -
NC [auth B5]bL32m
OC [auth B6]bL33m
I [auth BI]Mitochondrial ribosomal protein L9

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth B7]IPR000271Large ribosomal subunit protein bL34Family
J [auth BJ]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
J [auth BJ]IPR001790Large ribosomal subunit protein uL10Family
J [auth BJ]IPR047865Large ribosomal subunit protein uL10, bacterial typeFamily
K [auth BK]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
K [auth BK]IPR000911Ribosomal protein uL11Family
K [auth BK]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
K [auth BK]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
L [auth BL]IPR000352Peptide chain release factor class IDomain
M [auth BN]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
M [auth BN]IPR005822Large ribosomal subunit protein uL13Family
M [auth BN]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
M [auth BN]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
N [auth BO]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
N [auth BO]IPR000218Large ribosomal subunit protein uL14Family
P [auth BQ]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
P [auth BQ]IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
P [auth BQ]IPR016180Large ribosomal subunit protein uL16 domainDomain
P [auth BQ]IPR047873Large ribosomal subunit protein uL16Family
Q [auth BR]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
Q [auth BR]IPR000456Large ribosomal subunit protein bL17Family
R [auth BS]IPR005484Large ribosomal subunit protein uL18Family
R [auth BS]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
S [auth BT]IPR001857Large ribosomal subunit protein bL19Family
S [auth BT]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
S [auth BT]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
B [auth B8]IPR019338Large ribosomal subunit protein bL35mFamily
T [auth BU]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
T [auth BU]IPR005813Large ribosomal subunit protein bL20Family
U [auth BV]IPR028909Large ribosomal subunit protein bL21-likeFamily
U [auth BV]IPR001787Large ribosomal subunit protein bL21Family
U [auth BV]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
V [auth BW]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
V [auth BW]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
V [auth BW]IPR001063Large ribosomal subunit protein uL22Family
X [auth BY]IPR003256Large ribosomal subunit protein uL24Family
X [auth BY]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
X [auth BY]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
X [auth BY]IPR005824KOWDomain
X [auth BY]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
X [auth BY]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
Y [auth Ba]IPR010793Large ribosomal subunit protein mL37/mL65Family
Z [auth Bb]IPR036610PEBP-like superfamilyHomologous Superfamily
Z [auth Bb]IPR008914Phosphatidylethanolamine-binding proteinFamily
Z [auth Bb]IPR035810Phosphatidylethanolamine-binding protein, eukaryoticFamily
AA [auth Bc]IPR012676TGS-likeHomologous Superfamily
AA [auth Bc]IPR018163Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyHomologous Superfamily
AA [auth Bc]IPR004095TGSDomain
AA [auth Bc]IPR012675Beta-grasp domain superfamilyHomologous Superfamily
BA [auth Bd]IPR019192Large ribosomal subunit protein mL40Family
BA [auth Bd]IPR039145Large ribosomal subunit protein mL40, metazoa/plantsFamily
CA [auth Be]IPR019189Large ribosomal subunit protein mL41Family
C [auth B9]IPR000473Large ribosomal subunit protein bL36Family
C [auth B9]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
DA [auth Bf]IPR019346Large ribosomal subunit protein mL42Family
EA [auth Bg]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
EA [auth Bg]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
EA [auth Bg]IPR039927Large ribosomal subunit protein mL43Family
FA [auth Bh]IPR011907Ribonuclease IIIFamily
FA [auth Bh]IPR036389Ribonuclease III, endonuclease domain superfamilyHomologous Superfamily
FA [auth Bh]IPR044444Large ribosomal subunit protein mL44, dsRNA binding domain, metazoaDomain
FA [auth Bh]IPR014720Double-stranded RNA-binding domainDomain
GA [auth Bi]IPR032710NTF2-like domain superfamilyHomologous Superfamily
GA [auth Bi]IPR007379Tim44-like domainDomain
HA [auth Bj]IPR015797NUDIX hydrolase-like domain superfamilyHomologous Superfamily
HA [auth Bj]IPR021757Large ribosomal subunit protein mL46, N-terminalDomain
HA [auth Bj]IPR040008Large ribosomal subunit protein mL46Family
HA [auth Bj]IPR033650Large ribosomal subunit protein mL46, NUDIX domainDomain
IA [auth Bk]IPR027486Small ribosomal subunit protein uS10 domainDomain
IA [auth Bk]IPR027487Large ribosomal subunit protein mL48Family
IA [auth Bk]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
JA [auth Bl]IPR007740Large ribosomal subunit protein mL49Family
KA [auth Bm]IPR018305Large ribosomal subunit protein mL50Family
LA [auth Bn]IPR019373Large ribosomal subunit protein mL51Family
MA [auth Bo]IPR034596Large ribosomal subunit protein mL52Family
NA [auth Bp]IPR019716Large ribosomal subunit protein mL53Family
OA [auth Bq]IPR013870Large ribosomal subunit protein mL54Family
PA [auth Bt]IPR016576Large ribosomal subunit protein mL63Family
QA [auth Bu]IPR000352Peptide chain release factor class IDomain
RA [auth Bv]IPR018472Large ribosomal subunit protein mL64Family
RA [auth Bv]IPR043035Large ribosomal subunit protein mL64 domain superfamilyHomologous Superfamily
SA [auth Bw]IPR039982Large ribosomal subunit protein mL65Family
SA [auth Bw]IPR010793Large ribosomal subunit protein mL37/mL65Family
TA [auth Bx]IPR001648Small ribosomal subunit protein bS18Family
TA [auth Bx]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
IPR008932Large ribosomal subunit protein bL12, oligomerizationDomain
IPR013823Large ribosomal subunit protein bL12, C-terminalDomain
IPR036235Large ribosomal subunit protein bL12, oligomerization domain superfamilyHomologous Superfamily
IPR014719Ribosomal protein bL12, C-terminal/adaptor protein ClpS-likeHomologous Superfamily
IPR000206Large ribosomal subunit protein bL12Family
YA [auth AB]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
YA [auth AB]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
YA [auth AB]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
YA [auth AB]IPR001865Small ribosomal subunit protein uS2Family
ZA [auth AC]IPR026146Small ribosomal subunit protein uS3m, metazoanFamily
AB [auth AE]IPR000851Small ribosomal subunit protein uS5Family
AB [auth AE]IPR048584Small ribosomal subunit protein uS5m, N-terminal domainDomain
AB [auth AE]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
AB [auth AE]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
AB [auth AE]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
AB [auth AE]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
AB [auth AE]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
CB [auth AG]IPR000235Small ribosomal subunit protein uS7Family
CB [auth AG]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
CB [auth AG]IPR023798Small ribosomal subunit protein uS7 domainDomain
DB [auth AI]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
DB [auth AI]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
DB [auth AI]IPR000754Small ribosomal subunit protein uS9Family
DB [auth AI]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
EB [auth AJ]IPR027486Small ribosomal subunit protein uS10 domainDomain
EB [auth AJ]IPR040055Small ribosomal subunit protein uS10mFamily
EB [auth AJ]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
FB [auth AK]IPR001971Small ribosomal subunit protein uS11Family
FB [auth AK]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
FB [auth AK]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
GB [auth AL]IPR006032Small ribosomal subunit protein uS12Family
GB [auth AL]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
GB [auth AL]IPR005679Ribosomal protein uS12, bacterial-typeFamily
HB [auth AN]IPR001209Small ribosomal subunit protein uS14Family
IB [auth AO]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
IB [auth AO]IPR000589Small ribosomal subunit protein uS15Family
F [auth BD]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
F [auth BD]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
F [auth BD]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
F [auth BD]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
F [auth BD]IPR002171Large ribosomal subunit protein uL2Family
JB [auth AP]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
JB [auth AP]IPR000307Small ribosomal subunit protein bS16Family
KB [auth AQ]IPR039193Small ribosomal subunit protein uS17m, metazoaFamily
KB [auth AQ]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
KB [auth AQ]IPR000266Small ribosomal subunit protein uS17Family
MB [auth AR]IPR001648Small ribosomal subunit protein bS18Family
MB [auth AR]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
MB [auth AR]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
NB [auth AU]IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
NB [auth AU]IPR001911Small ribosomal subunit protein bS21Family
RB [auth Aa]IPR019374Small ribosomal subunit protein mS22Family
SB [auth Ab]IPR023611Small ribosomal subunit protein mS23, conserved domainDomain
SB [auth Ab]IPR019520Small ribosomal subunit protein mS23, metazoaFamily
TB [auth Ac]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
TB [auth Ac]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
TB [auth Ac]IPR040049Ribosomal subunit protein mS25/mL61, mitochondrialFamily
G [auth BE]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
G [auth BE]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
G [auth BE]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
G [auth BE]IPR000597Large ribosomal subunit protein uL3Family
UB [auth Ad]IPR002012Gonadotropin-releasing hormoneConserved Site
UB [auth Ad]IPR019792GonadoliberinFamily
VB [auth Ae]IPR019266Small ribosomal subunit protein mS27Family
VB [auth Ae]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
VB [auth Ae]IPR034913mS27/PTCD2Family
VB [auth Ae]IPR002885Pentatricopeptide repeatRepeat
WB [auth Af]IPR019375Small ribosomal subunit protein bS1mFamily
XB [auth Ag]IPR008092Small ribosomal subunit protein mS29, metazoan-typeFamily
XB [auth Ag]IPR019368Small ribosomal subunit protein mS29Family
XB [auth Ag]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
YB [auth Ah]IPR026299Mitochondrial 28S ribosomal protein S31Family
ZB [auth Ai]IPR013219Small ribosomal subunit protein mS33Family
AC [auth Aj]IPR032053Small ribosomal subunit protein mS34Family
BC [auth Ak]IPR039848Small ribosomal subunit protein mS35, mitochondrialFamily
BC [auth Ak]IPR019349Small ribosomal subunit protein mS35, mitochondrial, conserved domainDomain
CC [auth Am]IPR010625CHCHDomain
CC [auth Am]IPR009069Cysteine alpha-hairpin motif superfamilyHomologous Superfamily
CC [auth Am]IPR033620Small ribosomal subunit protein mS37, metazoanFamily
DC [auth An]IPR013177Ribosomal protein mS38, C-terminalDomain
H [auth BF]IPR013005Large ribosomal subunit protein uL4-likeFamily
H [auth BF]IPR002136Large ribosomal subunit protein uL4Family
H [auth BF]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
EC [auth Ao]IPR037387Pentatricopeptide repeat domain-containing protein 3Family
EC [auth Ao]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
EC [auth Ao]IPR002885Pentatricopeptide repeatRepeat
FC [auth Ap]IPR040054Small ribosomal subunit protein mS40Family
FC [auth Ap]IPR001648Small ribosomal subunit protein bS18Family
FC [auth Ap]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
IC [auth B0]IPR001684Large ribosomal subunit protein bL27Family
JC [auth B1]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
JC [auth B1]IPR026569Large ribosomal subunit protein bL28Family
JC [auth B1]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
KC [auth B2]IPR038340MRP-L47 superfamily, mitochondrialHomologous Superfamily
KC [auth B2]IPR010729Large ribosomal subunit protein uL29m, mitochondrialFamily
LC [auth B3]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
LC [auth B3]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
LC [auth B3]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
MC [auth B4]IPR044884Large ribosomal subunit protein mL55 superfamilyHomologous Superfamily
MC [auth B4]IPR018615Large ribosomal subunit protein mL55Family
NC [auth B5]IPR002677Large ribosomal subunit protein bL32Family
NC [auth B5]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
OC [auth B6]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
OC [auth B6]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
OC [auth B6]IPR001705Large ribosomal subunit protein bL33Family
I [auth BI]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
I [auth BI]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
I [auth BI]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
I [auth BI]IPR000244Large ribosomal subunit protein bL9Family