7NHP

Structure of PSII-I (PSII with Psb27, Psb28, and Psb34)

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: MemProtMD
Membrane Protein Annotation: mpstruc

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d7nhpa_	Membrane and cell surface proteins and peptides	Bacterial photosystem II reaction centre, L and M subunits	Bacterial photosystem II reaction centre, L and M subunits	Bacterial photosystem II reaction centre, L and M subunits	automated matches	(Thermosynechococcus vestitus BP-1 ) [TaxId: 197221 ],	SCOPe (2.08)
J [auth L]	d7nhpl_	Membrane and cell surface proteins and peptides	Single transmembrane helix	Photosystem II reaction center protein L, PsbL	PsbL-like	Photosystem II reaction center protein L, PsbL	(Thermosynechococcus vestitus BP-1 ) [TaxId: 197221 ],	SCOPe (2.08)
K [auth M]	d7nhpm_	Membrane and cell surface proteins and peptides	Single transmembrane helix	Photosystem II reaction center protein M, PsbM	PsbM-like	Photosystem II reaction center protein M, PsbM	(Thermosynechococcus vestitus BP-1 ) [TaxId: 197221 ],	SCOPe (2.08)
L [auth T]	d7nhpt_	Membrane and cell surface proteins and peptides	Single transmembrane helix	Photosystem II reaction center protein T, PsbT	PsbT-like	Photosystem II reaction center protein T, PsbT	(Thermosynechococcus vestitus BP-1 ) [TaxId: 197221 ],	SCOPe (2.08)
M [auth X]	d7nhpx_	Membrane and cell surface proteins and peptides	Single transmembrane helix	Photosystem II reaction center protein X, PsbX	PsbX-like	automated matches	(Thermosynechococcus vestitus BP-1 ) [TaxId: 197221 ],	SCOPe (2.08)
O [auth Z]	d7nhpz_	Membrane and cell surface proteins and peptides	Transmembrane helix hairpin	PsbZ-like	PsbZ-like	Photosystem II reaction center protein Z, PsbZ	(Thermosynechococcus vestitus BP-1 ) [TaxId: 197221 ],	SCOPe (2.08)
B	d7nhpb_	Membrane and cell surface proteins and peptides	Photosystem II antenna protein-like	Photosystem II antenna protein-like	Photosystem II antenna protein-like	Photosystem II core light harvesting protein PsbB	(Thermosynechococcus vestitus BP-1 ) [TaxId: 197221 ],	SCOPe (2.08)
C	d7nhpc_	Membrane and cell surface proteins and peptides	Photosystem II antenna protein-like	Photosystem II antenna protein-like	Photosystem II antenna protein-like	automated matches	(Thermosynechococcus vestitus BP-1 ) [TaxId: 197221 ],	SCOPe (2.08)
D	d7nhpd_	Membrane and cell surface proteins and peptides	Bacterial photosystem II reaction centre, L and M subunits	Bacterial photosystem II reaction centre, L and M subunits	Bacterial photosystem II reaction centre, L and M subunits	Photosystem II reaction center d2 protein PsbD2	(Thermosynechococcus vestitus BP-1 ) [TaxId: 197221 ],	SCOPe (2.08)
E	d7nhpe_	Membrane and cell surface proteins and peptides	Single transmembrane helix	Cytochrome b559 subunits	Cytochrome b559 subunits	Cytochrome b559 subunit alpha, PsbE	(Thermosynechococcus vestitus BP-1 ) [TaxId: 197221 ],	SCOPe (2.08)
F	d7nhpf_	Membrane and cell surface proteins and peptides	Single transmembrane helix	Cytochrome b559 subunits	Cytochrome b559 subunits	Cytochrome b559 subunit beta, PsbF	(Thermosynechococcus vestitus BP-1 ) [TaxId: 197221 ],	SCOPe (2.08)
G [auth H]	d7nhph_	Membrane and cell surface proteins and peptides	Single transmembrane helix	Photosystem II 10 kDa phosphoprotein PsbH	PsbH-like	Photosystem II reaction center protein H, PsbH	(Thermosynechococcus vestitus BP-1 ) [TaxId: 197221 ],	SCOPe (2.08)
H [auth I]	d7nhpi_	Membrane and cell surface proteins and peptides	Single transmembrane helix	Photosystem II reaction center protein I, PsbI	PsbI-like	Photosystem II reaction center protein I, PsbI	(Thermosynechococcus vestitus BP-1 ) [TaxId: 197221 ],	SCOPe (2.08)
I [auth K]	d7nhpk_	Membrane and cell surface proteins and peptides	Single transmembrane helix	Photosystem II reaction center protein K, PsbK	PsbK-like	automated matches	(Thermosynechococcus vestitus BP-1 ) [TaxId: 197221 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Bacterial photosystem II reaction centre L and M subunits	8032741	3000736	SCOP2B (2022-06-29)
J [auth L]	SCOP2B Superfamily	Photosystem II reaction center protein L PsbL	8032759	3001523	SCOP2B (2022-06-29)
K [auth M]	SCOP2B Superfamily	Photosystem II reaction center protein M PsbM	8032762	3001573	SCOP2B (2022-06-29)
L [auth T]	SCOP2B Superfamily	Photosystem II reaction center protein T PsbT	8032769	3001561	SCOP2B (2022-06-29)
N [auth y]	SCOP2B Superfamily	Photosystem II reaction center protein Ycf12	8093136	3002680	SCOP2B (2022-06-29)
O [auth Z]	SCOP2B Superfamily	PsbZ-like	8032770	3001624	SCOP2B (2022-06-29)
P [auth 1]	SCOP2B Superfamily	Psb27-like	8106712	3002869	SCOP2B (2022-06-29)
Q [auth 2]	SCOP2B Superfamily	Psb28-like	8056979	3002372	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Photosystem II antenna protein-like	8032743	3001674	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Photosystem II antenna protein-like	8032746	3001674	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Bacterial photosystem II reaction centre L and M subunits	8032750	3000736	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Cytochrome b559 subunits	8032749	3001602	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Cytochrome b559 subunits	8032752	3001602	SCOP2B (2022-06-29)
G [auth H]	SCOP2B Superfamily	Photosystem II 10 kDa phosphoprotein PsbH	8032753	3001547	SCOP2B (2022-06-29)
I [auth K]	SCOP2B Superfamily	Photosystem II reaction center protein K PsbK	8032757	3001585	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF00124	e7nhpA1	A: alpha bundles	X: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)	H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)	T: Bacterial photosystem II reaction centre L and M subunits-like	F: PF00124	ECOD (1.6)
J [auth L]	PF02419	e7nhpL1	A: extended segments	X: Photosystem II reaction center protein L, PsbL (From Topology)	H: Photosystem II reaction center protein L, PsbL (From Topology)	T: Photosystem II reaction center protein L, PsbL	F: PF02419	ECOD (1.6)
K [auth M]	PF05151	e7nhpM1	A: extended segments	X: Photosystem II reaction center protein M, PsbM (From Topology)	H: Photosystem II reaction center protein M, PsbM (From Topology)	T: Photosystem II reaction center protein M, PsbM	F: PF05151	ECOD (1.6)
L [auth T]	PF01405	e7nhpT1	A: extended segments	X: Photosystem II reaction center protein T, PsbT (From Topology)	H: Photosystem II reaction center protein T, PsbT (From Topology)	T: Photosystem II reaction center protein T, PsbT	F: PF01405	ECOD (1.6)
M [auth X]	PF06596	e7nhpX1	A: extended segments	X: Photosystem II PsbX protein (From Topology)	H: Photosystem II PsbX protein (From Topology)	T: Photosystem II PsbX protein	F: PF06596	ECOD (1.6)
N [auth y]	PF05969	e7nhpy1	A: extended segments	X: Photosystem II reaction center protein ycf12 (From Topology)	H: Photosystem II reaction center protein ycf12 (From Topology)	T: Photosystem II reaction center protein ycf12	F: PF05969	ECOD (1.6)
O [auth Z]	PF01737	e7nhpZ1	A: extended segments	X: PsbZ-like (From Topology)	H: PsbZ-like (From Topology)	T: PsbZ-like	F: PF01737	ECOD (1.6)
P [auth 1]	PF13326	e7nhp11	A: alpha bundles	X: Four-helical up-and-down bundle	H: Photosystem II lipoprotein Psb27 (From Topology)	T: Photosystem II lipoprotein Psb27	F: PF13326	ECOD (1.6)
Q [auth 2]	PF03912	e7nhp21	A: beta barrels	X: cradle loop barrel	H: Photosystem II accessory factor Psb28 (From Topology)	T: Photosystem II accessory factor Psb28	F: PF03912	ECOD (1.6)
B	PF00421	e7nhpB1	A: alpha bundles	X: Photosystem II antenna protein-like (From Topology)	H: Photosystem II antenna protein-like (From Topology)	T: Photosystem II antenna protein-like	F: PF00421	ECOD (1.6)
B	PF00421	e7nhpB2	A: a+b two layers	X: Photosystem II antenna protein PsbB insertion domain (From Topology)	H: Photosystem II antenna protein PsbB insertion domain (From Topology)	T: Photosystem II antenna protein PsbB insertion domain	F: PF00421	ECOD (1.6)
C	PF00421	e7nhpC1	A: alpha bundles	X: Photosystem II antenna protein-like (From Topology)	H: Photosystem II antenna protein-like (From Topology)	T: Photosystem II antenna protein-like	F: PF00421	ECOD (1.6)
D	PF00124	e7nhpD1	A: alpha bundles	X: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)	H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)	T: Bacterial photosystem II reaction centre L and M subunits-like	F: PF00124	ECOD (1.6)
E	PF00283,PF00284	e7nhpE1	A: extended segments	X: Cytochrome b559 subunits (From Topology)	H: Cytochrome b559 subunits (From Topology)	T: Cytochrome b559 subunits	F: PF00283,PF00284	ECOD (1.6)
F	PF00283	e7nhpF1	A: extended segments	X: Cytochrome b559 subunits (From Topology)	H: Cytochrome b559 subunits (From Topology)	T: Cytochrome b559 subunits	F: PF00283	ECOD (1.6)
G [auth H]	PF00737	e7nhpH1	A: extended segments	X: Photosystem II 10 kDa phosphoprotein PsbH (From Topology)	H: Photosystem II 10 kDa phosphoprotein PsbH (From Topology)	T: Photosystem II 10 kDa phosphoprotein PsbH	F: PF00737	ECOD (1.6)
H [auth I]	PF02532	e7nhpI1	A: extended segments	X: Photosystem II reaction center protein I, PsbI (From Topology)	H: Photosystem II reaction center protein I, PsbI (From Topology)	T: Photosystem II reaction center protein I, PsbI	F: PF02532	ECOD (1.6)
I [auth K]	PF02533	e7nhpK1	A: extended segments	X: Photosystem II reaction center protein K, PsbK (From Topology)	H: Photosystem II reaction center protein K, PsbK (From Topology)	T: Photosystem II reaction center protein K, PsbK	F: PF02533	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00124	Photosynthetic reaction centre protein (Photo_RC)	Photosynthetic reaction centre protein	-	Family
J [auth L]	PF02419	PsbL protein (PsbL)	PsbL protein	-	Family
K [auth M]	PF05151	Photosystem II reaction centre M protein (PsbM) (PsbM)	Photosystem II reaction centre M protein (PsbM)	-	Family
L [auth T]	PF01405	Photosystem II reaction centre T protein (PsbT)	Photosystem II reaction centre T protein	-	Family
M [auth X]	PF06596	Photosystem II reaction centre X protein (PsbX) (PsbX)	Photosystem II reaction centre X protein (PsbX)	-	Family
N [auth y]	PF05969	Photosystem II complex subunit Ycf12 (PSII_Ycf12)	Photosystem II complex subunit Ycf12	-	Family
O [auth Z]	PF01737	YCF9 (Ycf9)	YCF9	-	Family
P [auth 1]	PF13326	Photosystem II Pbs27 (PSII_Pbs27)	Photosystem II Pbs27	-	Family
Q [auth 2]	PF03912	Psb28 protein (Psb28)	Psb28 protein	-	Family
B	PF00421	Photosystem II protein (PSII)	Photosystem II protein	-	Family
C	PF00421	Photosystem II protein (PSII)	Photosystem II protein	-	Family
D	PF00124	Photosynthetic reaction centre protein (Photo_RC)	Photosynthetic reaction centre protein	-	Family
E	PF00283	Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits (Cytochrom_B559)	Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits	-	Family
E	PF00284	Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit (Cytochrom_B559a)	Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit	-	Family
F	PF00283	Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits (Cytochrom_B559)	Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits	-	Family
G [auth H]	PF00737	Photosystem II 10 kDa phosphoprotein (PsbH)	Photosystem II 10 kDa phosphoprotein	-	Family
H [auth I]	PF02532	Photosystem II reaction centre I protein (PSII 4.8 kDa protein) (PsbI)	Photosystem II reaction centre I protein (PSII 4.8 kDa protein)	-	Family
I [auth K]	PF02533	Photosystem II 4 kDa reaction centre component (PsbK)	Photosystem II 4 kDa reaction centre component	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Photosystem II protein D1 1	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor oxidoreductase activity oxidoreductase activity, acting on diphenols and related substances as donors catalytic activity electron transfer activity electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity oxygen evolving activity chlorophyll binding binding organic cyclic compound binding tetrapyrrole binding cation binding transition metal ion binding iron ion binding oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor oxidoreductase activity oxidoreductase activity, acting on diphenols and related substances as donors catalytic activity electron transfer activity electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity oxygen evolving activity chlorophyll binding binding organic cyclic compound binding tetrapyrrole binding cation binding transition metal ion binding iron ion binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction photosynthetic electron transport chain cellular metabolic process electron transport chain photosynthetic electron transport in photosystem II metabolic process cellular process generation of precursor metabolites and energy response to stimulus response to chemical response to stress response to herbicide response to toxic substance	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle plasma membrane-derived chromatophore membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle plasma membrane-derived chromatophore membrane plasma membrane plasma membrane-derived chromatophore thylakoid membrane cell periphery plasma membrane-derived thylakoid membrane plasma membrane region bacterial thylakoid cytoplasm
J [auth L]	Photosystem II reaction center protein L	-	photosynthesis cellular metabolic process metabolic process cellular process	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity photosystem II reaction center intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity photosystem II reaction center intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle plasma membrane-derived chromatophore membrane plasma membrane plasma membrane-derived chromatophore thylakoid membrane cell periphery plasma membrane-derived thylakoid membrane plasma membrane region bacterial thylakoid cytoplasm
K [auth M]	Photosystem II reaction center protein M	-	photosynthesis photosynthesis, light reaction cellular metabolic process metabolic process cellular process generation of precursor metabolites and energy	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle plasma membrane-derived chromatophore membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle plasma membrane-derived chromatophore membrane plasma membrane plasma membrane-derived chromatophore thylakoid membrane cell periphery plasma membrane-derived thylakoid membrane plasma membrane region bacterial thylakoid cytoplasm
L [auth T]	Photosystem II reaction center protein T	-	photosynthesis cellular metabolic process metabolic process cellular process	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity photosystem II reaction center intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity photosystem II reaction center intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle plasma membrane-derived chromatophore membrane plasma membrane plasma membrane-derived chromatophore thylakoid membrane cell periphery plasma membrane-derived thylakoid membrane plasma membrane region bacterial thylakoid cytoplasm
M [auth X]	Photosystem II reaction center X protein	-	photosynthesis cellular metabolic process metabolic process cellular process	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle plasma membrane-derived chromatophore membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle plasma membrane-derived chromatophore membrane plasma membrane plasma membrane-derived chromatophore thylakoid membrane cell periphery plasma membrane-derived thylakoid membrane plasma membrane region bacterial thylakoid cytoplasm
N [auth y]	Photosystem II reaction center protein Ycf12	-	photosynthesis cellular metabolic process metabolic process cellular process	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle plasma membrane-derived chromatophore membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle plasma membrane-derived chromatophore membrane plasma membrane plasma membrane-derived chromatophore thylakoid membrane cell periphery plasma membrane-derived thylakoid membrane plasma membrane region bacterial thylakoid cytoplasm
O [auth Z]	Photosystem II reaction center protein Z	-	photosynthesis cellular metabolic process metabolic process cellular process regulation of biological process regulation of cellular process regulation of photosynthesis photosynthesis, light reaction photosystem II stabilization regulation of photosynthesis, light reaction biological regulation regulation of cellular metabolic process regulation of generation of precursor metabolites and energy generation of precursor metabolites and energy photosynthesis cellular metabolic process metabolic process cellular process regulation of biological process regulation of cellular process regulation of photosynthesis photosynthesis, light reaction photosystem II stabilization regulation of photosynthesis, light reaction biological regulation regulation of cellular metabolic process regulation of generation of precursor metabolites and energy generation of precursor metabolites and energy regulation of metabolic process	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity photosystem II reaction center intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity photosystem II reaction center intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle plasma membrane-derived chromatophore membrane plasma membrane plasma membrane-derived chromatophore thylakoid membrane cell periphery plasma membrane-derived thylakoid membrane plasma membrane region bacterial thylakoid cytoplasm
P [auth 1]	Photosystem II lipoprotein Psb27	-	photosynthesis protein-containing complex organization photosynthesis, light reaction cellular metabolic process generation of precursor metabolites and energy photosystem II assembly cellular component organization cellular component biogenesis cellular component assembly protein-containing complex assembly cellular process metabolic process cellular component organization or biogenesis organonitrogen compound metabolic process photosynthesis protein-containing complex organization photosynthesis, light reaction cellular metabolic process generation of precursor metabolites and energy photosystem II assembly cellular component organization cellular component biogenesis cellular component assembly protein-containing complex assembly cellular process metabolic process cellular component organization or biogenesis organonitrogen compound metabolic process photosystem II repair photosynthesis, light harvesting primary metabolic process organic substance metabolic process protein repair protein metabolic process macromolecule metabolic process	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle plasma membrane-derived chromatophore membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle plasma membrane-derived chromatophore membrane plasma membrane plasma membrane-derived chromatophore thylakoid membrane cell periphery plasma membrane-derived thylakoid membrane plasma membrane region bacterial thylakoid cytoplasm thylakoid lumen
Q [auth 2]	Photosystem II reaction center Psb28 protein	-	photosynthesis cellular metabolic process metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane plasma membrane-derived chromatophore cellular anatomical entity thylakoid membrane intracellular organelle cell periphery plasma membrane-derived thylakoid membrane organelle intracellular non-membrane-bounded organelle plasma membrane region bacterial thylakoid intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane plasma membrane-derived chromatophore cellular anatomical entity thylakoid membrane intracellular organelle cell periphery plasma membrane-derived thylakoid membrane organelle intracellular non-membrane-bounded organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid non-membrane-bounded organelle protein-containing complex photosystem catalytic complex photosystem II membrane protein complex photosystem II oxygen evolving complex oxidoreductase complex
R [auth 3]	Tsl0063 protein	-	photosynthesis cellular metabolic process metabolic process cellular process	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle plasma membrane-derived chromatophore membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle plasma membrane-derived chromatophore membrane plasma membrane plasma membrane-derived chromatophore thylakoid membrane cell periphery plasma membrane-derived thylakoid membrane plasma membrane region bacterial thylakoid cytoplasm
B	Photosystem II CP47 reaction center protein	electron transfer activity electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity chlorophyll binding binding organic cyclic compound binding tetrapyrrole binding	photosynthesis photosynthesis, light reaction photosynthetic electron transport chain cellular metabolic process electron transport chain photosynthetic electron transport in photosystem II metabolic process cellular process generation of precursor metabolites and energy	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle plasma membrane-derived chromatophore membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle plasma membrane-derived chromatophore membrane plasma membrane plasma membrane-derived chromatophore thylakoid membrane cell periphery plasma membrane-derived thylakoid membrane plasma membrane region bacterial thylakoid cytoplasm
C	Photosystem II CP43 reaction center protein	electron transfer activity electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity chlorophyll binding binding organic cyclic compound binding tetrapyrrole binding cation binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction photosynthetic electron transport chain cellular metabolic process electron transport chain photosynthetic electron transport in photosystem II metabolic process cellular process generation of precursor metabolites and energy	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle plasma membrane-derived chromatophore membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle plasma membrane-derived chromatophore membrane plasma membrane plasma membrane-derived chromatophore thylakoid membrane cell periphery plasma membrane-derived thylakoid membrane plasma membrane region bacterial thylakoid cytoplasm
D	Photosystem II D2 protein	electron transfer activity electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity oxidoreductase activity oxygen evolving activity catalytic activity chlorophyll binding binding organic cyclic compound binding tetrapyrrole binding cation binding transition metal ion binding iron ion binding ion binding metal ion binding electron transfer activity electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity oxidoreductase activity oxygen evolving activity catalytic activity chlorophyll binding binding organic cyclic compound binding tetrapyrrole binding cation binding transition metal ion binding iron ion binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction photosynthetic electron transport chain cellular metabolic process electron transport chain photosynthetic electron transport in photosystem II metabolic process cellular process generation of precursor metabolites and energy	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle plasma membrane-derived chromatophore membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle plasma membrane-derived chromatophore membrane plasma membrane plasma membrane-derived chromatophore thylakoid membrane cell periphery plasma membrane-derived thylakoid membrane plasma membrane region bacterial thylakoid cytoplasm
E	Cytochrome b559 subunit alpha	binding organic cyclic compound binding tetrapyrrole binding heme binding electron transfer activity cation binding transition metal ion binding iron ion binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction photosynthetic electron transport chain cellular metabolic process electron transport chain metabolic process cellular process generation of precursor metabolites and energy	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity photosystem II reaction center intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity photosystem II reaction center intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle plasma membrane-derived chromatophore membrane plasma membrane plasma membrane-derived chromatophore thylakoid membrane cell periphery plasma membrane-derived thylakoid membrane plasma membrane region bacterial thylakoid cytoplasm
F	Cytochrome b559 subunit beta	binding organic cyclic compound binding tetrapyrrole binding heme binding electron transfer activity cation binding transition metal ion binding iron ion binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction photosynthetic electron transport chain cellular metabolic process electron transport chain metabolic process cellular process generation of precursor metabolites and energy	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity photosystem II reaction center intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity photosystem II reaction center intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle plasma membrane-derived chromatophore membrane plasma membrane plasma membrane-derived chromatophore thylakoid membrane cell periphery plasma membrane-derived thylakoid membrane plasma membrane region bacterial thylakoid cytoplasm
G [auth H]	Photosystem II reaction center protein H	ion binding binding anion binding phosphate ion binding small molecule binding	regulation of protein stability biological regulation regulation of biological quality protein stabilization photosynthesis cellular metabolic process metabolic process cellular process	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle plasma membrane-derived chromatophore membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle plasma membrane-derived chromatophore membrane plasma membrane plasma membrane-derived chromatophore thylakoid membrane cell periphery plasma membrane-derived thylakoid membrane plasma membrane region bacterial thylakoid cytoplasm
H [auth I]	Photosystem II reaction center protein I	-	photosynthesis cellular metabolic process metabolic process cellular process	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity photosystem II reaction center intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity photosystem II reaction center intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle plasma membrane-derived chromatophore membrane plasma membrane plasma membrane-derived chromatophore thylakoid membrane cell periphery plasma membrane-derived thylakoid membrane plasma membrane region bacterial thylakoid cytoplasm
I [auth K]	Photosystem II reaction center protein K	-	photosynthesis cellular metabolic process metabolic process cellular process	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity photosystem II reaction center intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity photosystem II reaction center intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle plasma membrane-derived chromatophore membrane plasma membrane plasma membrane-derived chromatophore thylakoid membrane cell periphery plasma membrane-derived thylakoid membrane plasma membrane region bacterial thylakoid cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR005867	Photosystem II protein D1	Family
A	IPR036854	Photosystem II protein D1/D2 superfamily	Homologous Superfamily
A	IPR000484	Photosynthetic reaction centre, L/M	Family
J [auth L]	IPR003372	Photosystem II PsbL	Family
J [auth L]	IPR037266	Photosystem II PsbL superfamily	Homologous Superfamily
K [auth M]	IPR007826	Photosystem II PsbM	Family
K [auth M]	IPR037269	Photosystem II PsbM superfamily	Homologous Superfamily
L [auth T]	IPR001743	Photosystem II PsbT	Family
L [auth T]	IPR037268	Photosystem II PsbT superfamily	Homologous Superfamily
M [auth X]	IPR009518	Photosystem II PsbX	Family
M [auth X]	IPR023431	Photosystem II PsbX, type 1 subfamily	Family
N [auth y]	IPR010284	Photosystem II reaction center protein Ycf12	Family
O [auth Z]	IPR036512	Photosystem II PsbZ superfamily	Homologous Superfamily
O [auth Z]	IPR002644	Photosystem II PsbZ, reaction centre	Family
P [auth 1]	IPR025585	Photosystem II Psb27	Family
P [auth 1]	IPR038450	Photosystem II Psb27 superfamily	Homologous Superfamily
P [auth 1]	IPR017488	Photosystem II Psb27, cyanobacteria	Family
Q [auth 2]	IPR005610	Photosystem II Psb28, class 1	Family
Q [auth 2]	IPR038676	Photosystem II Psb28, class 1 superfamily	Homologous Superfamily
R [auth 3]	IPR048028	Photosystem II assembly protein Psb34-like	Family
B	IPR036001	Photosystem antenna protein-like superfamily	Homologous Superfamily
B	IPR000932	Photosystem antenna protein-like	Family
B	IPR017486	Photosystem II CP47 reaction centre protein	Family
C	IPR036001	Photosystem antenna protein-like superfamily	Homologous Superfamily
C	IPR000932	Photosystem antenna protein-like	Family
C	IPR005869	Photosystem II CP43 reaction centre protein	Family
C	IPR044900	Photosystem II CP43 reaction centre protein superfamily	Homologous Superfamily
D	IPR036854	Photosystem II protein D1/D2 superfamily	Homologous Superfamily
D	IPR000484	Photosynthetic reaction centre, L/M	Family
D	IPR005868	Photosystem II D2 protein	Family
E	IPR013081	Photosystem II cytochrome b559, N-terminal	Domain
E	IPR006217	Photosystem II cytochrome b559, alpha subunit	Family
E	IPR013082	Photosystem II cytochrome b559, alpha subunit, lumenal region	Domain
E	IPR037025	Photosystem II cytochrome b559, alpha subunit superfamily	Homologous Superfamily
E	IPR006216	Photosystem II cytochrome b559, conserved site	Conserved Site
F	IPR006241	Photosystem II cytochrome b559, beta subunit	Family
F	IPR013081	Photosystem II cytochrome b559, N-terminal	Domain
F	IPR006216	Photosystem II cytochrome b559, conserved site	Conserved Site
G [auth H]	IPR036863	Photosystem II reaction centre protein H superfamily	Homologous Superfamily
G [auth H]	IPR001056	Photosystem II reaction centre protein H	Family
H [auth I]	IPR037271	Photosystem II PsbI superfamily	Homologous Superfamily
H [auth I]	IPR003686	Photosystem II PsbI	Family
I [auth K]	IPR037270	Photosystem II PsbK superfamily	Homologous Superfamily
I [auth K]	IPR003687	Photosystem II PsbK	Family

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A, B, C, D, E A, B, C, D, E, F, G [auth H], H [auth I], I [auth K], J [auth L], K [auth M], L [auth T], M [auth X], N [auth y], O [auth Z], P [auth 1], Q [auth 2], R [auth 3]	OPM	Transmembrane	Alpha-helical polytopic	Photosystems	Photosystem II

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A, B, C, D, E A, B, C, D, E, F, G [auth H], H [auth I], I [auth K], J [auth L], K [auth M], L [auth T], M [auth X], N [auth y], O [auth Z], P [auth 1], Q [auth 2], R [auth 3]	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

Chains	External Link	Comment
A, B, C, D, E A, B, C, D, E, F, G [auth H], H [auth I], I [auth K], J [auth L], K [auth M], L [auth T], M [auth X], N [auth y], O [auth Z], P [auth 1], Q [auth 2], R [auth 3]	MemProtMD	Annotated as membrane protein by MemProtMD

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A, B, C, D, E A, B, C, D, E, F, G [auth H], H [auth I], I [auth K], J [auth L], K [auth M], L [auth T], M [auth X], N [auth y], O [auth Z], P [auth 1], Q [auth 2], R [auth 3]	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	Photosystems	Photosystem II assembly intermediates, PSII-M