7N9Y | pdb_00007n9y

Full-length TcdB and CSPG4 (401-560) complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
B [auth A]SCOP2B SuperfamilyNucleotide-diphospho-sugar transferases 8033597 3000077 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth A]CW_binding_1e7n9yA5 A: beta duplicates or obligate multimersX: beta-hairpin stack (From Topology)H: beta-hairpin stack (From Topology)T: beta-hairpin stackF: CW_binding_1ECOD (1.6)
B [auth A]TcdA_TcdB_pore_2nde7n9yA1 A: beta duplicates or obligate multimersX: Toxin A (TcdA) delivery domain (From Topology)H: Toxin A (TcdA) delivery domain (From Topology)T: Toxin A (TcdA) delivery domainF: TcdA_TcdB_pore_2ndECOD (1.6)
B [auth A]TcdA_TcdB_pore_1ste7n9yA4 A: alpha arraysX: Toxin A (TcdA) helical domain (From Topology)H: Toxin A (TcdA) helical domain (From Topology)T: Toxin A (TcdA) helical domainF: TcdA_TcdB_pore_1stECOD (1.6)
B [auth A]MLDe7n9yA9 A: alpha bundlesX: Bromodomain-likeH: PMT helical bundle domain-likeT: PMT helical bundle domain-likeF: MLDECOD (1.6)
B [auth A]TcdA_TcdBe7n9yA2 A: a/b three-layered sandwichesX: Nucleotide-diphospho-sugar transferases (From Topology)H: Nucleotide-diphospho-sugar transferases (From Topology)T: Nucleotide-diphospho-sugar transferasesF: TcdA_TcdBECOD (1.6)
B [auth A]Peptidase_C80e7n9yA3 A: a/b three-layered sandwichesX: Caspase-like (From Topology)H: Caspase-like (From Topology)T: Caspase-likeF: Peptidase_C80ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth B]PF16184Cadherin-like (Cadherin_3)Cadherin-likeDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth A]Toxin B
A [auth B]Chondroitin sulfate proteoglycan 4