7N30 | pdb_00007n30

Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
LA [auth LT]SCOP2B SuperfamilyRibosomal protein L20 8096382 3000563 SCOP2B (2022-06-29)
I [auth SI]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8082661 3000100 SCOP2B (2022-06-29)
H [auth SH]SCOP2B SuperfamilyRibosomal protein S8 8079059 3000709 SCOP2B (2022-06-29)
G [auth SG]SCOP2B SuperfamilyRibosomal protein S7 8077979 3000799 SCOP2B (2022-06-29)
F [auth SF]SCOP2B SuperfamilyRibosomal protein S6 8066495 3001323 SCOP2B (2022-06-29)
AB [auth Lj]SCOP2B SuperfamilyRibosomal protein L36 8035391 3001346 SCOP2B (2022-06-29)
ZA [auth Li]SCOP2B SuperfamilyL35p-like 8035388 3000790 SCOP2B (2022-06-29)
XA [auth Lg]SCOP2B SuperfamilyZn-binding ribosomal proteins 8096362 3001320 SCOP2B (2022-06-29)
WA [auth Lf]SCOP2B SuperfamilyZn-binding ribosomal proteins 8096380 3001320 SCOP2B (2022-06-29)
VA [auth Le]SCOP2B SuperfamilyL28p-like 8032740 3001966 SCOP2B (2022-06-29)
UA [auth Ld]SCOP2B SuperfamilyRibosomal protein L30p/L7e 8096372 3001378 SCOP2B (2022-06-29)
TA [auth Lc]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8096370 3000713 SCOP2B (2022-06-29)
SA [auth Lb]SCOP2B SuperfamilyL28p-like 8035424 3001966 SCOP2B (2022-06-29)
RA [auth La]SCOP2B SuperfamilyRibosomal L27 protein-like 8096338 3000539 SCOP2B (2022-06-29)
QA [auth LY]SCOP2B SuperfamilyRibosomal protein L25-like 8042538 3001161 SCOP2B (2022-06-29)
PA [auth LX]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8096358 3000334 SCOP2B (2022-06-29)
OA [auth LW]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8035415 3000210 SCOP2B (2022-06-29)
NA [auth LV]SCOP2B SuperfamilyRibosomal protein L22 8096336 3001078 SCOP2B (2022-06-29)
D [auth SD]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8083400 3001473 SCOP2B (2022-06-29)
MA [auth LU]SCOP2B Superfamilyl21p-like 8096354 3002005 SCOP2B (2022-06-29)
KA [auth LS]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8096364 3000334 SCOP2B (2022-06-29)
JA [auth LR]SCOP2B SuperfamilyTranslational machinery components 8032969 3000571 SCOP2B (2022-06-29)
IA [auth LQ]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8035409 3000995 SCOP2B (2022-06-29)
HA [auth LP]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8096366 3000884 SCOP2B (2022-06-29)
GA [auth LO]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8070553 3001045 SCOP2B (2022-06-29)
FA [auth LN]SCOP2B Superfamily50S Ribosomal protein L14-like 8103358 3000433 SCOP2B (2022-06-29)
EA [auth LM]SCOP2B SuperfamilyRibosomal protein L13 8096350 3001134 SCOP2B (2022-06-29)
DA [auth LI]SCOP2B SuperfamilyRibosomal protein L9 C-domain 8032958 3000329 SCOP2B (2022-06-29)
DA [auth LI]SCOP2B SuperfamilyL9 N-domain-like 8032960 3000338 SCOP2B (2022-06-29)
CA [auth LF]SCOP2B SuperfamilyRibosomal protein L6 8035398 3000724 SCOP2B (2022-06-29)
CA [auth LF]SCOP2B SuperfamilyRibosomal protein L6 8035397 3000724 SCOP2B (2022-06-29)
BA [auth LE]SCOP2B SuperfamilyRL5-like 8096352 3001709 SCOP2B (2022-06-29)
AA [auth LD]SCOP2B SuperfamilyRibosomal protein L4 8096356 3001146 SCOP2B (2022-06-29)
Z [auth LC]SCOP2B SuperfamilyTranslational proteins 8032955 3000811 SCOP2B (2022-06-29)
Y [auth LB]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8035393 3000334 SCOP2B (2022-06-29)
Y [auth LB]SCOP2B SuperfamilyNucleic acid-binding proteins 8035394 3000135 SCOP2B (2022-06-29)
U [auth SU]SCOP2B SuperfamilyRibosomal protein S21 8053090 3002159 SCOP2B (2022-06-29)
B [auth SB]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8063838 3001397 SCOP2B (2022-06-29)
S [auth SS]SCOP2B SuperfamilyRibosomal protein S19 8103915 3000686 SCOP2B (2022-06-29)
Q [auth SQ]SCOP2B SuperfamilyNucleic acid-binding proteins 8059276 3000135 SCOP2B (2022-06-29)
P [auth SP]SCOP2B SuperfamilyRibosomal protein S16 8106547 3000680 SCOP2B (2022-06-29)
O [auth SO]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8032375 3001284 SCOP2B (2022-06-29)
N [auth SN]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052568 3000068 SCOP2B (2022-06-29)
M [auth SM]SCOP2B SuperfamilyS13-like H2TH domain 8098358 3000053 SCOP2B (2022-06-29)
K [auth SK]SCOP2B SuperfamilyTranslational machinery components 8035368 3000571 SCOP2B (2022-06-29)
J [auth SJ]SCOP2B SuperfamilyRibosomal protein S10 8102681 3001336 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
E [auth SE]GP120e7n30SE1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
LA [auth LT]GP120e7n30LT1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
I [auth SI]GP120e7n30SI1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
H [auth SH]GP120e7n30SH1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
G [auth SG]GP120e7n30SG1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
F [auth SF]GP120e7n30SF1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
AB [auth Lj]GP120e7n30Lj1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
ZA [auth Li]GP120e7n30Li1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
YA [auth Lh]GP120e7n30Lh1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
XA [auth Lg]GP120e7n30Lg1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
WA [auth Lf]GP120e7n30Lf1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
VA [auth Le]GP120e7n30Le1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
UA [auth Ld]GP120e7n30Ld1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
TA [auth Lc]GP120e7n30Lc1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
SA [auth Lb]GP120e7n30Lb1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
RA [auth La]GP120e7n30La1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
QA [auth LY]GP120e7n30LY1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
PA [auth LX]GP120e7n30LX1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
OA [auth LW]WD40e7n30LW1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: WD40ECOD (develop294)
NA [auth LV]GP120e7n30LV1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
D [auth SD]GP120e7n30SD1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
MA [auth LU]GP120e7n30LU1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
KA [auth LS]GP120e7n30LS1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
JA [auth LR]GP120e7n30LR1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
IA [auth LQ]GP120e7n30LQ1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
HA [auth LP]GP120e7n30LP1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
GA [auth LO]GP120e7n30LO1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
FA [auth LN]GP120e7n30LN1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
EA [auth LM]GP120e7n30LM1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
DA [auth LI]GP120e7n30LI1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
C [auth SC]GP120e7n30SC1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
CA [auth LF]GP120e7n30LF1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
BA [auth LE]GP120e7n30LE1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
AA [auth LD]GP120e7n30LD1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
Z [auth LC]GP120e7n30LC1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
Y [auth LB]GP120e7n30LB1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
U [auth SU]GP120e7n30SU1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
T [auth ST]GP120e7n30ST1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
B [auth SB]GP120e7n30SB1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
S [auth SS]GP120e7n30SS1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
R [auth SR]GP120e7n30SR1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
Q [auth SQ]GP120e7n30SQ1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
P [auth SP]GP120e7n30SP1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
O [auth SO]GP120e7n30SO1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
N [auth SN]GP120e7n30SN1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
M [auth SM]GP120e7n30SM1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
L [auth SL]GP120e7n30SL1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
K [auth SK]GP120e7n30SK1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)
J [auth SJ]GP120e7n30SJ1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: GP120ECOD (develop294)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
E [auth SE]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
E [auth SE]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
LA [auth LT]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
I [auth SI]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
H [auth SH]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
G [auth SG]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Domain
F [auth SF]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6Domain
QA [auth LY]PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress. Domain
PA [auth LX]PF17136Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24)Large ribosomal subunit protein uL24, C-terminal domainThis entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ...This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 makes very minor contributions to the biogenesis structure, and function of 60s ribosomal subunits [1]. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly [2]. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage [3].
Domain
PA [auth LX]PF00467KOW motif (KOW)KOW motif- Family
OA [auth LW]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
NA [auth LV]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
D [auth SD]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
D [auth SD]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
MA [auth LU]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
KA [auth LS]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
IA [auth LQ]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
HA [auth LP]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
GA [auth LO]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
FA [auth LN]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
EA [auth LM]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
DA [auth LI]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domainDomain
DA [auth LI]PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domainDomain
DA [auth LI]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
C [auth SC]PF07650KH domain (KH_2)KH domainDomain
C [auth SC]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
CA [auth LF]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
CA [auth LF]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
BA [auth LE]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
BA [auth LE]PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
BA [auth LE]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
AA [auth LD]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
AA [auth LD]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
Z [auth LC]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
Z [auth LC]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
Y [auth LB]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
Y [auth LB]PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
Y [auth LB]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
U [auth SU]PF01165Ribosomal protein S21 (Ribosomal_S21)Ribosomal protein S21- Family
T [auth ST]PF01649Ribosomal protein S20 (Ribosomal_S20p)Ribosomal protein S20- Family
B [auth SB]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
S [auth SS]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
R [auth SR]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
Q [auth SQ]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
P [auth SP]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
O [auth SO]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
N [auth SN]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
M [auth SM]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
K [auth SK]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
J [auth SJ]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
E [auth SE]30S ribosomal protein S5
LA [auth LT]50S ribosomal protein L20
I [auth SI]30S ribosomal protein S9
H [auth SH]30S ribosomal protein S8
G [auth SG]30S ribosomal protein S7
F [auth SF]30S ribosomal protein S6
DB [auth Dt]tRNA---
CB [auth Pt]tRNA---
BB [auth Pp]Nascent peptide---
AB [auth Lj]50S ribosomal protein L36
ZA [auth Li]50S ribosomal protein L35
YA [auth Lh]50S ribosomal protein L34
XA [auth Lg]50S ribosomal protein L33
WA [auth Lf]50S ribosomal protein L32
VA [auth Le]50S ribosomal protein L31
UA [auth Ld]50S ribosomal protein L30
TA [auth Lc]50S ribosomal protein L29
SA [auth Lb]50S ribosomal protein L28
RA [auth La]50S ribosomal protein L27
QA [auth LY]50S ribosomal protein L25
PA [auth LX]50S ribosomal protein L24
OA [auth LW]50S ribosomal protein L23
NA [auth LV]50S ribosomal protein L22
D [auth SD]30S ribosomal protein S4
MA [auth LU]50S ribosomal protein L21
KA [auth LS]50S ribosomal protein L19
JA [auth LR]50S ribosomal protein L18
IA [auth LQ]50S ribosomal protein L17
HA [auth LP]50S ribosomal protein L16
GA [auth LO]50S ribosomal protein L15
FA [auth LN]50S ribosomal protein L14
EA [auth LM]50S ribosomal protein L13
DA [auth LI]50S ribosomal protein L9
C [auth SC]30S ribosomal protein S3
CA [auth LF]50S ribosomal protein L6
BA [auth LE]50S ribosomal protein L5
AA [auth LD]50S ribosomal protein L4
Z [auth LC]50S ribosomal protein L3
Y [auth LB]50S ribosomal protein L2
X [auth 5]5S rRNA---
W [auth 23]23S rRNA---
V [auth mR]mRNA---
U [auth SU]30S ribosomal protein S21
T [auth ST]30S ribosomal protein S20
B [auth SB]30S ribosomal protein S2
S [auth SS]30S ribosomal protein S19
R [auth SR]30S ribosomal protein S18
Q [auth SQ]30S ribosomal protein S17
P [auth SP]30S ribosomal protein S16
O [auth SO]30S ribosomal protein S15
N [auth SN]30S ribosomal protein S14
M [auth SM]30S ribosomal protein S13
L [auth SL]30S ribosomal protein S12---
K [auth SK]30S ribosomal protein S11
J [auth SJ]30S ribosomal protein S10
A [auth 16]16S rRNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
E [auth SE]IPR000851Small ribosomal subunit protein uS5Family
E [auth SE]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
E [auth SE]IPR005712Small ribosomal subunit protein uS5, bacteriaFamily
E [auth SE]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
E [auth SE]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
E [auth SE]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
E [auth SE]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
LA [auth LT]IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
LA [auth LT]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
LA [auth LT]IPR005813Large ribosomal subunit protein bL20Family
I [auth SI]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
I [auth SI]IPR023035Small ribosomal subunit protein uS9, bacteria/plastidFamily
I [auth SI]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
I [auth SI]IPR000754Small ribosomal subunit protein uS9Family
I [auth SI]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
H [auth SH]IPR000630Small ribosomal subunit protein uS8Family
H [auth SH]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
H [auth SH]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
G [auth SG]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
G [auth SG]IPR005717Small ribosomal subunit protein uS7, bacteria/organellaFamily
G [auth SG]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
G [auth SG]IPR000235Small ribosomal subunit protein uS7Family
G [auth SG]IPR023798Small ribosomal subunit protein uS7 domainDomain
F [auth SF]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
F [auth SF]IPR000529Small ribosomal subunit protein bS6Family
F [auth SF]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
F [auth SF]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
F [auth SF]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
AB [auth Lj]IPR000473Large ribosomal subunit protein bL36Family
AB [auth Lj]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
ZA [auth Li]IPR021137Large ribosomal subunit protein bL35-likeFamily
ZA [auth Li]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
ZA [auth Li]IPR001706Large ribosomal subunit protein bL35Family
ZA [auth Li]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
YA [auth Lh]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
YA [auth Lh]IPR000271Large ribosomal subunit protein bL34Family
XA [auth Lg]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
XA [auth Lg]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
XA [auth Lg]IPR001705Large ribosomal subunit protein bL33Family
XA [auth Lg]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
WA [auth Lf]IPR002677Large ribosomal subunit protein bL32Family
WA [auth Lf]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
WA [auth Lf]IPR044957Large ribosomal subunit protein bL32, bacteriaFamily
VA [auth Le]IPR002150Large ribosomal subunit protein bL31 type A/BFamily
VA [auth Le]IPR027491Large ribosomal subunit protein bL31 type AFamily
VA [auth Le]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
VA [auth Le]IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
UA [auth Ld]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
UA [auth Ld]IPR005996Large ribosomal subunit protein uL30, bacteriaFamily
UA [auth Ld]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
UA [auth Ld]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
TA [auth Lc]IPR050063Universal ribosomal protein uL29Family
TA [auth Lc]IPR001854Large ribosomal subunit protein uL29Family
TA [auth Lc]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
TA [auth Lc]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
SA [auth Lb]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
SA [auth Lb]IPR001383Large ribosomal subunit protein bL28, bacteriaFamily
SA [auth Lb]IPR026569Large ribosomal subunit protein bL28Family
SA [auth Lb]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
RA [auth La]IPR001684Large ribosomal subunit protein bL27Family
RA [auth La]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
QA [auth LY]IPR020055Ribosomal protein bL25, short-formFamily
QA [auth LY]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
QA [auth LY]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
QA [auth LY]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
QA [auth LY]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
PA [auth LX]IPR057264Large ribosomal subunit protein uL24, C-terminal domainDomain
PA [auth LX]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
PA [auth LX]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
PA [auth LX]IPR003256Large ribosomal subunit protein uL24Family
PA [auth LX]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
PA [auth LX]IPR005824KOWDomain
PA [auth LX]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
OA [auth LW]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
OA [auth LW]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
OA [auth LW]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
OA [auth LW]IPR013025Large ribosomal subunit protein uL23-likeFamily
NA [auth LV]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
NA [auth LV]IPR001063Large ribosomal subunit protein uL22Family
NA [auth LV]IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
NA [auth LV]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
NA [auth LV]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
D [auth SD]IPR002942RNA-binding S4 domainDomain
D [auth SD]IPR022801Small ribosomal subunit protein uS4Family
D [auth SD]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
D [auth SD]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
D [auth SD]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
D [auth SD]IPR005709Small ribosomal subunit protein uS4, bacteriaFamily
MA [auth LU]IPR028909Large ribosomal subunit protein bL21-likeFamily
MA [auth LU]IPR001787Large ribosomal subunit protein bL21Family
MA [auth LU]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
MA [auth LU]IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
KA [auth LS]IPR001857Large ribosomal subunit protein bL19Family
KA [auth LS]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
KA [auth LS]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
KA [auth LS]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
JA [auth LR]IPR005484Large ribosomal subunit protein uL18, bacterial/plantae/animaliaFamily
JA [auth LR]IPR057268Large ribosomal subunit protein uL18Family
JA [auth LR]IPR004389Large ribosomal subunit protein uL18, bacteriaFamily
IA [auth LQ]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
IA [auth LQ]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
IA [auth LQ]IPR000456Large ribosomal subunit protein bL17Family
HA [auth LP]IPR000114Large ribosomal subunit protein uL16, bacteriaFamily
HA [auth LP]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
HA [auth LP]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
HA [auth LP]IPR016180Large ribosomal subunit protein uL16 domainDomain
HA [auth LP]IPR047873Large ribosomal subunit protein uL16Family
GA [auth LO]IPR021131Large ribosomal subunit protein uL15/eL18Domain
GA [auth LO]IPR030878Large ribosomal subunit protein uL15Family
GA [auth LO]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
GA [auth LO]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
GA [auth LO]IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
FA [auth LN]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
FA [auth LN]IPR000218Large ribosomal subunit protein uL14Family
FA [auth LN]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
FA [auth LN]IPR005745Large ribosomal subunit protein uL14, bacteriaFamily
EA [auth LM]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
EA [auth LM]IPR005822Large ribosomal subunit protein uL13Family
EA [auth LM]IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
EA [auth LM]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
DA [auth LI]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
DA [auth LI]IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
DA [auth LI]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
DA [auth LI]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
DA [auth LI]IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
DA [auth LI]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
DA [auth LI]IPR000244Large ribosomal subunit protein bL9Family
C [auth SC]IPR005704Small ribosomal subunit protein uS3, bacteriaFamily
C [auth SC]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
C [auth SC]IPR057258Small ribosomal subunit protein uS3Family
C [auth SC]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
C [auth SC]IPR004087K Homology domainDomain
C [auth SC]IPR004044K Homology domain, type 2Domain
C [auth SC]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
C [auth SC]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
C [auth SC]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
CA [auth LF]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
CA [auth LF]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
CA [auth LF]IPR000702Large ribosomal subunit protein uL6-likeFamily
CA [auth LF]IPR019906Large ribosomal subunit protein uL6, bacteriaFamily
CA [auth LF]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
BA [auth LE]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
BA [auth LE]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
BA [auth LE]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
BA [auth LE]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
BA [auth LE]IPR002132Large ribosomal subunit protein uL5Family
BA [auth LE]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
AA [auth LD]IPR013005Large ribosomal subunit protein uL4-likeFamily
AA [auth LD]IPR002136Large ribosomal subunit protein uL4Family
AA [auth LD]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
Z [auth LC]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
Z [auth LC]IPR019927Large ribosomal subunit protein uL3, bacteria/organellaFamily
Z [auth LC]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
Z [auth LC]IPR000597Large ribosomal subunit protein uL3Family
Y [auth LB]IPR005880Large ribosomal subunit protein uL2, bacteria/organellaFamily
Y [auth LB]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
Y [auth LB]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
Y [auth LB]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Y [auth LB]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
Y [auth LB]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
Y [auth LB]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
Y [auth LB]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
Y [auth LB]IPR002171Large ribosomal subunit protein uL2Family
U [auth SU]IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
U [auth SU]IPR018278Small ribosomal subunit protein bS21, conserved siteConserved Site
U [auth SU]IPR001911Small ribosomal subunit protein bS21Family
T [auth ST]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
T [auth ST]IPR002583Small ribosomal subunit protein bS20Family
B [auth SB]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
B [auth SB]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
B [auth SB]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
B [auth SB]IPR001865Small ribosomal subunit protein uS2Family
S [auth SS]IPR005732Small ribosomal subunit protein uS19, bacteriaFamily
S [auth SS]IPR002222Small ribosomal subunit protein uS19Family
S [auth SS]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
S [auth SS]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
R [auth SR]IPR001648Small ribosomal subunit protein bS18Family
R [auth SR]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
R [auth SR]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
Q [auth SQ]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
Q [auth SQ]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
Q [auth SQ]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
Q [auth SQ]IPR000266Small ribosomal subunit protein uS17Family
P [auth SP]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
P [auth SP]IPR000307Small ribosomal subunit protein bS16Family
P [auth SP]IPR020592Small ribosomal subunit protein bS16, conserved siteConserved Site
O [auth SO]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
O [auth SO]IPR000589Small ribosomal subunit protein uS15Family
O [auth SO]IPR005290Small ribosomal subunit protein uS15, bacteriaFamily
N [auth SN]IPR001209Small ribosomal subunit protein uS14Family
N [auth SN]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
N [auth SN]IPR023036Small ribosomal subunit protein uS14, bacteria/plastidFamily
M [auth SM]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
M [auth SM]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
M [auth SM]IPR001892Small ribosomal subunit protein uS13Family
M [auth SM]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
M [auth SM]IPR019980Small ribosomal subunit protein uS13, bacteriaFamily
K [auth SK]IPR001971Small ribosomal subunit protein uS11Family
K [auth SK]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
K [auth SK]IPR019981Small ribosomal subunit protein uS11, bacteriaFamily
K [auth SK]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
J [auth SJ]IPR027486Small ribosomal subunit protein uS10 domainDomain
J [auth SJ]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
J [auth SJ]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
J [auth SJ]IPR001848Small ribosomal subunit protein uS10Family