7MUY | pdb_00007muy

Reconstruction of the Legionella pneumophila Dot/Icm T4SS 3DVA Map 5


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
YE [auth BL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
WC [auth LL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
WB [auth JL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
VA [auth HL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
T [auth FL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
SF [auth CL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
OG [auth DL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
KD [auth ML]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
KC [auth KL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
JB [auth IL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
IA [auth GL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
G [auth EL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
EE [auth AL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
XE [auth BK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
VC [auth LK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
VB [auth JK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
UA [auth HK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
S [auth FK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
RF [auth CK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
JD [auth MK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
JC [auth KK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
IB [auth IK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
HA [auth GK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
F [auth EK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
DG [auth DK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
DD [auth AK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
YE [auth BL]Secretin_Ne7muyBL1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
WC [auth LL]Secretin_Ne7muyLL1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
WB [auth JL]Secretin_Ne7muyJL1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
VA [auth HL]Secretin_Ne7muyHL1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
T [auth FL]Secretin_Ne7muyFL1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
SF [auth CL]Secretin_Ne7muyCL1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
OG [auth DL]Secretin_Ne7muyDL1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
KD [auth ML]Secretin_Ne7muyML1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
KC [auth KL]Secretin_Ne7muyKL1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
JB [auth IL]Secretin_Ne7muyIL1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
IA [auth GL]Secretin_Ne7muyGL1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
G [auth EL]Secretin_Ne7muyEL1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
EE [auth AL]Secretin_Ne7muyAL1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
XE [auth BK]Secretin_Ne7muyBK1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
VC [auth LK]Secretin_Ne7muyLK1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
VB [auth JK]Secretin_Ne7muyJK1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
UA [auth HK]Secretin_Ne7muyHK1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
S [auth FK]Secretin_Ne7muyFK1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
RF [auth CK]Secretin_Ne7muyCK1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
JD [auth MK]Secretin_Ne7muyMK1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
JC [auth KK]Secretin_Ne7muyKK1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
IB [auth IK]Secretin_Ne7muyIK1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
HA [auth GK]Secretin_Ne7muyGK1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
F [auth EK]Secretin_Ne7muyEK1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
DG [auth DK]Secretin_Ne7muyDK1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
DD [auth AK]Glyco_transf_41e7muyAK1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_transf_41ECOD (v294.2)
ZF [auth DD]MIF4Ge7muyDD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
Y [auth Fd]MIF4Ge7muyFd1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
XF [auth Cd]MIF4Ge7muyCd1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
WG [auth AD]MIF4Ge7muyAD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
UE [auth BD]MIF4Ge7muyBD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
TG [auth Dd]MIF4Ge7muyDd1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
SE [auth Ad]MIF4Ge7muyAd1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
RC [auth LD]MIF4Ge7muyLD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
RB [auth JD]MIF4Ge7muyJD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
PD [auth Md]MIF4Ge7muyMd1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
PC [auth Kd]MIF4Ge7muyKd1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
PA [auth HD]MIF4Ge7muyHD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
OB [auth Id]MIF4Ge7muyId1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
NF [auth CD]MIF4Ge7muyCD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
NA [auth Gd]MIF4Ge7muyGd1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
N [auth FD]MIF4Ge7muyFD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
L [auth Ed]MIF4Ge7muyEd1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
FD [auth MD]MIF4Ge7muyMD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
FC [auth KD]MIF4Ge7muyKD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
EB [auth ID]MIF4Ge7muyID1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
DF [auth Bd]MIF4Ge7muyBd1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
DA [auth GD]MIF4Ge7muyGD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
BD [auth Ld]MIF4Ge7muyLd1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
BC [auth Jd]MIF4Ge7muyJd1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
B [auth ED]MIF4Ge7muyED1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
AB [auth Hd]MIF4Ge7muyHd1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
WD [auth WG]MIF4Ge7muyWG1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
UG [auth Ag]MIF4Ge7muyAg1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
TC [auth Lg]MIF4Ge7muyLg1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
TB [auth Jg]MIF4Ge7muyJg1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
SD [auth VG]MIF4Ge7muyVG1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
SA [auth Hg]MIF4Ge7muyHg1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
PF [auth Cg]MIF4Ge7muyCg1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
P [auth Fg]MIF4Ge7muyFg1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
MG [auth PG]Secretin_Ne7muyPG1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
LG [auth OG]Secretin_Ne7muyOG1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
LE [auth ZG]MIF4Ge7muyZG1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
KG [auth NG]Secretin_Ne7muyNG1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
JG [auth MG]Secretin_Ne7muyMG1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
IG [auth LG]Secretin_Ne7muyLG1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
HG [auth KG]Secretin_Ne7muyKG1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
HD [auth Mg]MIF4Ge7muyMg1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
HC [auth Kg]MIF4Ge7muyKg1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
GG [auth JG]Secretin_Ne7muyJG1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
GF [auth GG]Secretin_Ne7muyGG1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
GE [auth YG]MIF4Ge7muyYG1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
GB [auth Ig]MIF4Ge7muyIg1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
FG [auth IG]Secretin_Ne7muyIG1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
FE [auth FG]Secretin_Ne7muyFG1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
FA [auth Gg]MIF4Ge7muyGg1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
EG [auth HG]Secretin_Ne7muyHG1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
ED [auth EG]Secretin_Ne7muyEG1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
DC [auth DG]Secretin_Ne7muyDG1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
DB [auth Bg]MIF4Ge7muyBg1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
D [auth Eg]MIF4Ge7muyEg1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
CB [auth CG]Secretin_Ne7muyCG1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
BG [auth Dg]MIF4Ge7muyDg1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
BA [auth BG]Secretin_Ne7muyBG1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)
AE [auth XG]MIF4Ge7muyXG1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
A [auth AG]Secretin_Ne7muyAG1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v294.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Unknown protein fragment---
Neurogenic locus notch---
DUF2807 domain-containing protein---
Outer membrane protein, OmpA family protein- -
Inner membrane lipoprotein YiaD- -
Type IV secretion protein IcmK---
DotF- - -
DotD- - -
DotC- - -
Unknown protein fragment---
IcmE protein- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR006665OmpA-like domainDomain
IPR050330Bacterial Outer Membrane Structural/FunctionalFamily
IPR036737OmpA-like domain superfamilyHomologous Superfamily
IPR006665OmpA-like domainDomain
IPR050330Bacterial Outer Membrane Structural/FunctionalFamily
IPR036737OmpA-like domain superfamilyHomologous Superfamily
IPR038140DotD superfamilyHomologous Superfamily
IPR031817DotD proteinFamily
IPR031618Putative type IV secretory system proteinFamily
IPR053285Thylakoid lumenal pentapeptide repeat proteinFamily
IPR042217Type IV secretion system, VirB10/TrbIHomologous Superfamily
IPR057481Decapeptide repeatRepeat
IPR049855DotG/IcmE-like, C-terminal domainDomain
IPR005498Type IV secretion system, VirB10/TraB/TrbIFamily