7MLV
Cryo-EM reveals partially and fully assembled native glycine receptors,homomeric tetramer
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth J] | PF07686 | e7mlvJ1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
C [auth K] | PF07686 | e7mlvK1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
E [auth M] | PF07686 | e7mlvM1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
G [auth I] | PF07686 | e7mlvI1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
B [auth G] | PF07686 | e7mlvG1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
D [auth F] | PF07686 | e7mlvF1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
F [auth L] | PF07686 | e7mlvL1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
H | PF07686 | e7mlvH1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
I [auth D] | PF02931 | e7mlvD1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Nicotinic receptor ligand binding domain-like (From Topology) | T: Nicotinic receptor ligand binding domain-like | F: PF02931 | ECOD (1.6) |
J [auth A] | PF02931 | e7mlvA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Nicotinic receptor ligand binding domain-like (From Topology) | T: Nicotinic receptor ligand binding domain-like | F: PF02931 | ECOD (1.6) |
J [auth A] | PF02932 | e7mlvA2 | A: alpha bundles | X: Neurotransmitter-gated ion-channel transmembrane pore (From Topology) | H: Neurotransmitter-gated ion-channel transmembrane pore (From Topology) | T: Neurotransmitter-gated ion-channel transmembrane pore | F: PF02932 | ECOD (1.6) |
K [auth B] | PF02931 | e7mlvB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Nicotinic receptor ligand binding domain-like (From Topology) | T: Nicotinic receptor ligand binding domain-like | F: PF02931 | ECOD (1.6) |
K [auth B] | PF02932 | e7mlvB2 | A: alpha bundles | X: Neurotransmitter-gated ion-channel transmembrane pore (From Topology) | H: Neurotransmitter-gated ion-channel transmembrane pore (From Topology) | T: Neurotransmitter-gated ion-channel transmembrane pore | F: PF02932 | ECOD (1.6) |
L [auth C] | PF02931 | e7mlvC1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Nicotinic receptor ligand binding domain-like (From Topology) | T: Nicotinic receptor ligand binding domain-like | F: PF02931 | ECOD (1.6) |
L [auth C] | PF02932 | e7mlvC2 | A: alpha bundles | X: Neurotransmitter-gated ion-channel transmembrane pore (From Topology) | H: Neurotransmitter-gated ion-channel transmembrane pore (From Topology) | T: Neurotransmitter-gated ion-channel transmembrane pore | F: PF02932 | ECOD (1.6) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
A [auth J], C [auth K], E [auth M], G [auth I] | Light Chain | IGKV6 | Kappa | glycine receptor alpha 1 | SAbDab (2024-05-03) |
B [auth G], D [auth F], F [auth L], H | Heavy Chain | IGHV1 | - | glycine receptor alpha 1 | SAbDab (2024-05-03) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
I [auth D], J [auth A], K [auth B], L [auth C] | PF02931 | Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD) | Neurotransmitter-gated ion-channel ligand binding domain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Pentameric ligand-gated ion channels | Ligand-gated ion channel of neurotransmitter receptors |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |