7MIZ | pdb_00007miz

Atomic structure of cortical microtubule from Toxoplasma gondii


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
GC [auth k]Abhydrolase_1e7mizk1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Abhydrolase_1ECOD (v294.1)
HC [auth l]Abhydrolase_1e7mizl1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Abhydrolase_1ECOD (v294.1)
QC [auth w]Abhydrolase_1e7mizw1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Abhydrolase_1ECOD (v294.1)
RC [auth x]Abhydrolase_1e7mizx1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Abhydrolase_1ECOD (v294.1)
WB [auth a]14-3-3e7miza1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
XB [auth b]14-3-3e7mizb1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
BA [auth A5]14-3-3e7mizA51 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
BB [auth D1]14-3-3e7mizD11 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
DB [auth D3]14-3-3e7mizD31 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
FB [auth D5]14-3-3e7mizD51 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
HA [auth B1]14-3-3e7mizB11 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
HB [auth D7]14-3-3e7mizD71 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
JA [auth B3]14-3-3e7mizB31 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
NA [auth B7]14-3-3e7mizB71 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
NB [auth E3]14-3-3e7mizE31 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
PA [auth B9]14-3-3e7mizB91 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
RA [auth C1]14-3-3e7mizC11 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
RB [auth E7]14-3-3e7mizE71 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
TA [auth C3]14-3-3e7mizC31 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
TB [auth E9]14-3-3e7mizE91 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
VA [auth C5]14-3-3e7mizC51 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
X [auth A1]HD_4e7mizA11 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: HD_4ECOD (v294.1)
Z [auth A3]14-3-3e7mizA31 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
ZA [auth C9]14-3-3e7mizC91 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
XA [auth C7]14-3-3e7mizC71 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
VB [auth F1]14-3-3e7mizF11 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
PB [auth E5]14-3-3e7mizE51 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
LB [auth E1]14-3-3e7mizE11 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
LA [auth B5]14-3-3e7mizB51 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
JB [auth D9]14-3-3e7mizD91 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
FA [auth A9]14-3-3e7mizA91 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
DA [auth A7]14-3-3e7mizA71 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
AA [auth A4]14-3-3e7mizA41 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
AB [auth D0]14-3-3e7mizD01 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
CA [auth A6]14-3-3e7mizA61 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
CB [auth D2]14-3-3e7mizD21 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
EA [auth A8]14-3-3e7mizA81 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
EB [auth D4]14-3-3e7mizD41 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
GA [auth B0]14-3-3e7mizB01 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
GB [auth D6]14-3-3e7mizD61 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
IB [auth D8]14-3-3e7mizD81 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
KB [auth E0]14-3-3e7mizE01 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
MA [auth B6]14-3-3e7mizB61 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
MB [auth E2]14-3-3e7mizE21 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
OB [auth E4]14-3-3e7mizE41 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
QB [auth E6]14-3-3e7mizE61 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
SA [auth C2]14-3-3e7mizC21 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
SB [auth E8]14-3-3e7mizE81 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
UA [auth C4]14-3-3e7mizC41 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
UB [auth F0]14-3-3e7mizF01 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
W [auth A0]HD_4e7mizA01 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: HD_4ECOD (v294.1)
WA [auth C6]14-3-3e7mizC61 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
Y [auth A2]14-3-3e7mizA21 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
YA [auth C8]14-3-3e7mizC81 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
QA [auth C0]14-3-3e7mizC01 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
OA [auth B8]14-3-3e7mizB81 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
KA [auth B4]14-3-3e7mizB41 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)
IA [auth B2]14-3-3e7mizB21 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: 14-3-3ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00091Tubulin/FtsZ family, GTPase domain (Tubulin)Tubulin/FtsZ family, GTPase domainThis family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ...This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules.
Domain
PF03953Tubulin C-terminal domain (Tubulin_C)Tubulin C-terminal domainThis family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ...This family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules. (The FtsZ GTPases have been split into their won family).
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
GC [auth k],
HC [auth l],
QC [auth w],
RC [auth x]
PDI family protein
PDI family protein
Tubulin beta chain
Tubulin alpha chain
Microtubule associated protein SPM1 -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
GC [auth k],
HC [auth l],
QC [auth w],
RC [auth x]
IPR012336Thioredoxin-like foldDomain
GC [auth k],
HC [auth l],
QC [auth w],
RC [auth x]
IPR036249Thioredoxin-like superfamilyHomologous Superfamily
IPR012336Thioredoxin-like foldDomain
IPR036249Thioredoxin-like superfamilyHomologous Superfamily
IPR003008Tubulin/FtsZ, GTPase domainDomain
IPR008280Tubulin/FtsZ, C-terminalHomologous Superfamily
IPR037103Tubulin/FtsZ-like, C-terminal domainHomologous Superfamily
IPR017975Tubulin, conserved siteConserved Site
IPR000217TubulinFamily
IPR023123Tubulin, C-terminalHomologous Superfamily
IPR002453Beta tubulinFamily
IPR013838Beta tubulin, autoregulation binding siteBinding Site
IPR018316Tubulin/FtsZ, 2-layer sandwich domainDomain
IPR036525Tubulin/FtsZ, GTPase domain superfamilyHomologous Superfamily
IPR003008Tubulin/FtsZ, GTPase domainDomain
IPR008280Tubulin/FtsZ, C-terminalHomologous Superfamily
IPR037103Tubulin/FtsZ-like, C-terminal domainHomologous Superfamily
IPR017975Tubulin, conserved siteConserved Site
IPR002452Alpha tubulinFamily
IPR000217TubulinFamily
IPR023123Tubulin, C-terminalHomologous Superfamily
IPR018316Tubulin/FtsZ, 2-layer sandwich domainDomain
IPR036525Tubulin/FtsZ, GTPase domain superfamilyHomologous Superfamily
IPR033336Stabilizer of axonemal microtubules 1/2Family