7LXC | pdb_00007lxc

Structure and Interactions of DED1 of human cFLIP

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	DED	e7lxcA1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DED	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.533.10	Mainly Alpha	Orthogonal Bundle	Death Domain, Fas	Death Domain, Fas	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF01335	Death effector domain (DED)	Death effector domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	DED1ch	cysteine-type peptidase activity peptidase activity catalytic activity, acting on a protein cysteine-type endopeptidase activity hydrolase activity catalytic activity endopeptidase activity protein binding binding enzyme binding protease binding enzyme regulator activity enzyme activator activity molecular function activator activity cysteine-type peptidase activity peptidase activity catalytic activity, acting on a protein cysteine-type endopeptidase activity hydrolase activity catalytic activity endopeptidase activity protein binding binding enzyme binding protease binding enzyme regulator activity enzyme activator activity molecular function activator activity molecular function regulator activity protein-containing complex binding signaling receptor binding cytokine receptor binding tumor necrosis factor receptor superfamily binding death receptor binding protein-macromolecule adaptor activity molecular adaptor activity caspase binding identical protein binding signaling adaptor activity death effector domain binding protein domain specific binding receptor serine/threonine kinase binding tumor necrosis factor receptor binding	regulation of biological process cellular response to growth factor stimulus response to stimulus negative regulation of response to stimulus regulation of cellular response to transforming growth factor beta stimulus cellular response to transforming growth factor beta stimulus response to endogenous stimulus regulation of cellular response to growth factor stimulus biological regulation negative regulation of biological process negative regulation of cellular response to growth factor stimulus negative regulation of cellular response to transforming growth factor beta stimulus cellular response to endogenous stimulus response to transforming growth factor beta regulation of response to stimulus regulation of biological process cellular response to growth factor stimulus response to stimulus negative regulation of response to stimulus regulation of cellular response to transforming growth factor beta stimulus cellular response to transforming growth factor beta stimulus response to endogenous stimulus regulation of cellular response to growth factor stimulus biological regulation negative regulation of biological process negative regulation of cellular response to growth factor stimulus negative regulation of cellular response to transforming growth factor beta stimulus cellular response to endogenous stimulus response to transforming growth factor beta regulation of response to stimulus response to growth factor cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction positive regulation of canonical NF-kappaB signal transduction signaling positive regulation of biological process regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction intracellular signaling cassette signal transduction positive regulation of cellular process regulation of signaling positive regulation of intracellular signal transduction canonical NF-kappaB signal transduction regulation of cell communication regulation of canonical NF-kappaB signal transduction cellular process positive regulation of signaling positive regulation of ERK1 and ERK2 cascade positive regulation of MAPK cascade regulation of MAPK cascade MAPK cascade ERK1 and ERK2 cascade regulation of ERK1 and ERK2 cascade multicellular organismal process connective tissue development positive regulation of cell population proliferation renal system development kidney vasculature development multicellular organism development renal system vasculature development positive regulation of glomerular mesangial cell proliferation regulation of glomerular mesangial cell proliferation anatomical structure development nephron development system development blood vessel development positive regulation of cell proliferation involved in kidney development developmental process cell population proliferation animal organ development cell proliferation involved in kidney development glomerular mesangium development tissue development vasculature development circulatory system development glomerulus development regulation of cell population proliferation glomerular mesangial cell proliferation glomerulus vasculature development kidney development negative regulation of programmed cell death regulation of apoptotic process regulation of programmed cell death cell death negative regulation of apoptotic process negative regulation of cellular process apoptotic process programmed cell death response to ketone response to lipid response to chemical response to oxygen-containing compound response to testosterone response to decreased oxygen levels cellular response to oxygen levels cellular response to hypoxia cellular response to decreased oxygen levels cellular response to chemical stimulus cellular response to stress response to hypoxia response to stress response to oxygen levels response to abiotic stimulus extrinsic apoptotic signaling pathway via death domain receptors negative regulation of signaling extrinsic apoptotic signaling pathway negative regulation of cell communication negative regulation of extrinsic apoptotic signaling pathway negative regulation of apoptotic signaling pathway cell surface receptor signaling pathway negative regulation of extrinsic apoptotic signaling pathway via death domain receptors negative regulation of signal transduction regulation of extrinsic apoptotic signaling pathway apoptotic signaling pathway regulation of extrinsic apoptotic signaling pathway via death domain receptors regulation of apoptotic signaling pathway reactive oxygen species biosynthetic process regulation of biosynthetic process negative regulation of metabolic process reactive oxygen species metabolic process regulation of reactive oxygen species biosynthetic process negative regulation of reactive oxygen species metabolic process biosynthetic process negative regulation of reactive oxygen species biosynthetic process negative regulation of biosynthetic process metabolic process regulation of metabolic process regulation of reactive oxygen species metabolic process muscle atrophy system process striated muscle adaptation skeletal muscle atrophy muscle adaptation skeletal muscle adaptation muscle system process striated muscle atrophy neuron apoptotic process positive regulation of programmed cell death positive regulation of apoptotic process positive regulation of neuron apoptotic process regulation of neuron apoptotic process muscle structure development skeletal muscle organ development skeletal muscle tissue development muscle tissue development muscle organ development striated muscle tissue development negative regulation of hepatocyte apoptotic process regulation of epithelial cell apoptotic process epithelial cell apoptotic process regulation of hepatocyte apoptotic process negative regulation of epithelial cell apoptotic process hepatocyte apoptotic process response to hormone response to steroid hormone cellular response to ketone cellular response to steroid hormone stimulus cellular response to hormone stimulus cellular response to dexamethasone stimulus response to glucocorticoid cellular response to glucocorticoid stimulus cellular response to oxygen-containing compound cellular response to corticosteroid stimulus response to corticosteroid cellular response to lipid response to dexamethasone regulation of neuron projection development regulation of cellular component organization positive regulation of cellular component organization cellular developmental process cell projection organization cell development neuron projection development cellular component organization neurogenesis neuron differentiation positive regulation of neuron projection development cell differentiation positive regulation of cell projection organization cellular component organization or biogenesis plasma membrane bounded cell projection organization regulation of cell projection organization nervous system development generation of neurons neuron development regulation of plasma membrane bounded cell projection organization regulation of syncytium formation by plasma membrane fusion cell-cell fusion negative regulation of syncytium formation by plasma membrane fusion muscle cell differentiation myotube differentiation negative regulation of cellular component organization myoblast fusion syncytium formation by cell-cell fusion regulation of myoblast fusion negative regulation of myoblast fusion striated muscle cell differentiation regulation of hepatocyte proliferation positive regulation of epithelial cell proliferation hepatocyte proliferation positive regulation of hepatocyte proliferation regulation of epithelial cell proliferation epithelial cell proliferation myeloid leukocyte differentiation hemopoiesis macrophage differentiation mononuclear cell differentiation myeloid cell differentiation leukocyte differentiation skeletal muscle satellite cell proliferation muscle cell proliferation regulation of skeletal muscle satellite cell proliferation skeletal muscle cell proliferation regulation of skeletal muscle cell proliferation striated muscle cell proliferation necroptotic process programmed necrotic cell death regulation of necroptotic process regulation of programmed necrotic cell death tissue regeneration skeletal muscle tissue regeneration developmental growth growth regeneration negative regulation of cardiac muscle cell apoptotic process muscle cell apoptotic process regulation of cardiac muscle cell apoptotic process regulation of muscle cell apoptotic process cardiac muscle cell apoptotic process regulation of striated muscle cell apoptotic process striated muscle cell apoptotic process negative regulation of muscle cell apoptotic process negative regulation of striated muscle cell apoptotic process response to estradiol cellular response to estradiol stimulus cellular component assembly involved in morphogenesis skeletal myofibril assembly membraneless organelle assembly cellular component biogenesis striated muscle cell development cellular anatomical entity morphogenesis cellular component assembly muscle cell development actin filament-based process actomyosin structure organization actin cytoskeleton organization organelle assembly anatomical structure morphogenesis myofibril assembly organelle organization anatomical structure formation involved in morphogenesis supramolecular fiber organization cytoskeleton organization cellular response to nitrogen compound response to peptide hormone cellular response to peptide hormone stimulus response to nitrogen compound response to insulin cellular response to insulin stimulus cellular response to epidermal growth factor stimulus response to epidermal growth factor proteolysis primary metabolic process protein metabolic process macromolecule metabolic process positive regulation of extracellular matrix organization extracellular matrix organization regulation of extracellular matrix organization extracellular structure organization external encapsulating structure organization cellular response to nitric oxide response to nitric oxide cellular response to reactive nitrogen species immune system development lymph node development immune system process hematopoietic or lymphoid organ development immune response regulation of adaptive immune response adaptive immune response positive regulation of immune response regulation of immune response regulation of immune system process positive regulation of adaptive immune response positive regulation of immune system process homeostatic process leukocyte apoptotic process lymphocyte apoptotic process negative regulation of leukocyte apoptotic process T cell homeostasis regulation of activation-induced cell death of T cells activation-induced cell death of T cells regulation of T cell apoptotic process negative regulation of activation-induced cell death of T cells regulation of leukocyte apoptotic process regulation of lymphocyte apoptotic process negative regulation of T cell apoptotic process multicellular organismal-level homeostasis leukocyte homeostasis negative regulation of immune system process homeostasis of number of cells T cell apoptotic process lymphocyte homeostasis negative regulation of lymphocyte apoptotic process biological process involved in interspecies interaction between organisms response to other organism defense response defense response to symbiont response to external stimulus response to biotic stimulus defense response to other organism innate immune response response to external biotic stimulus positive regulation of response to biotic stimulus regulation of type I interferon-mediated signaling pathway response to cytokine interferon-mediated signaling pathway cellular response to type I interferon cellular response to cytokine stimulus regulation of innate immune response regulation of response to cytokine stimulus positive regulation of defense response response to type I interferon regulation of defense response regulation of response to biotic stimulus regulation of response to external stimulus positive regulation of type I interferon-mediated signaling pathway positive regulation of response to cytokine stimulus cytokine-mediated signaling pathway positive regulation of response to external stimulus regulation of response to stress positive regulation of innate immune response regulation of cytokine-mediated signaling pathway response to peptide type I interferon-mediated signaling pathway positive regulation of cytokine-mediated signaling pathway regulation of execution phase of apoptosis positive regulation of execution phase of apoptosis execution phase of apoptosis necroptotic signaling pathway cell activation lymphocyte activation lymphocyte differentiation leukocyte activation T cell differentiation in thymus T cell activation T cell differentiation signal transduction in absence of ligand extrinsic apoptotic signaling pathway in absence of ligand positive regulation of interleukin-8 production positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process cytokine production regulation of cytokine production positive regulation of macromolecule metabolic process regulation of multicellular organismal process interleukin-8 production regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of gene expression positive regulation of gene expression positive regulation of multicellular organismal process regulation of macromolecule biosynthetic process positive regulation of cytokine production regulation of interleukin-8 production positive regulation of protein metabolic process regulation of protein metabolic process regulation of primary metabolic process regulation of proteolysis positive regulation of proteolysis spleen development regulation of leukocyte differentiation regulation of developmental process regulation of cell differentiation regulation of cell development positive regulation of developmental process positive regulation of cell differentiation positive regulation of hemopoiesis regulation of macrophage differentiation regulation of multicellular organismal development regulation of myeloid cell differentiation positive regulation of cell development regulation of myeloid leukocyte differentiation positive regulation of myeloid leukocyte differentiation positive regulation of macrophage differentiation positive regulation of myeloid cell differentiation regulation of hemopoiesis positive regulation of leukocyte differentiation protein-containing complex organization death-inducing signaling complex assembly protein-containing complex assembly adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains lymphocyte mediated immunity regulation of immune effector process T cell mediated immunity positive regulation of leukocyte mediated immunity positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains positive regulation of lymphocyte mediated immunity regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains positive regulation of leukocyte mediated cytotoxicity leukocyte mediated immunity positive regulation of immune effector process regulation of T cell mediated immunity T cell mediated cytotoxicity positive regulation of T cell mediated cytotoxicity regulation of leukocyte mediated cytotoxicity leukocyte mediated cytotoxicity immune effector process regulation of leukocyte mediated immunity regulation of T cell mediated cytotoxicity regulation of lymphocyte mediated immunity positive regulation of T cell mediated immunity regulation of cell killing positive regulation of cell killing cell killing defense response to virus response to virus positive regulation of DNA-templated transcription RNA metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process transcription by RNA polymerase II regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of transcription by RNA polymerase II positive regulation of transcription by RNA polymerase II nucleobase-containing compound biosynthetic process nucleic acid metabolic process positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process regulation of DNA-templated transcription behavior adult behavior behavioral response to cocaine response to cocaine response to alkaloid gland development thymus development motor neuron apoptotic process positive regulation of apoptotic signaling pathway positive regulation of extrinsic apoptotic signaling pathway negative regulation of necroptotic process negative regulation of programmed necrotic cell death regulation of leukocyte activation regulation of cell activation positive regulation of cell activation lymphocyte proliferation positive regulation of leukocyte activation regulation of leukocyte proliferation positive regulation of T cell activation positive regulation of lymphocyte proliferation positive regulation of T cell proliferation positive regulation of activated T cell proliferation mononuclear cell proliferation regulation of leukocyte cell-cell adhesion positive regulation of leukocyte proliferation regulation of activated T cell proliferation positive regulation of leukocyte cell-cell adhesion leukocyte proliferation leukocyte cell-cell adhesion activated T cell proliferation positive regulation of cell-cell adhesion positive regulation of lymphocyte activation cell adhesion cell-cell adhesion positive regulation of mononuclear cell proliferation regulation of cell-cell adhesion T cell proliferation regulation of lymphocyte proliferation positive regulation of cell adhesion regulation of cell adhesion regulation of T cell activation regulation of T cell proliferation regulation of mononuclear cell proliferation regulation of lymphocyte activation response to mechanical stimulus cellular response to mechanical stimulus cellular response to abiotic stimulus cellular response to external stimulus cellular response to environmental stimulus positive regulation of locomotion regulation of cell motility regulation of CD8-positive, alpha-beta T cell extravasation positive regulation of CD8-positive, alpha-beta cytotoxic T cell extravasation CD8-positive, alpha-beta T cell extravasation regulation of lymphocyte migration positive regulation of cell migration positive regulation of T cell extravasation positive regulation of cell motility regulation of cell migration cellular extravasation positive regulation of mononuclear cell migration regulation of CD8-positive, alpha-beta cytotoxic T cell extravasation regulation of T cell extravasation cell migration cell motility regulation of mononuclear cell migration locomotion positive regulation of lymphocyte migration T cell extravasation regulation of leukocyte migration positive regulation of T cell migration lymphocyte migration CD8-positive, alpha-beta cytotoxic T cell extravasation positive regulation of leukocyte migration leukocyte migration positive regulation of CD8-positive, alpha-beta T cell extravasation regulation of locomotion regulation of T cell migration mononuclear cell migration T cell migration regulation of cellular extravasation positive regulation of cellular extravasation regulation of tumor necrosis factor production positive regulation of tumor necrosis factor superfamily cytokine production tumor necrosis factor superfamily cytokine production positive regulation of tumor necrosis factor production tumor necrosis factor production regulation of tumor necrosis factor superfamily cytokine production TRAIL-activated apoptotic signaling pathway regulation of type II interferon production type II interferon production positive regulation of type II interferon production	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol cell periphery protein-containing complex plasma membrane protein complex membrane plasma membrane death-inducing signaling complex membrane protein complex CD95 death-inducing signaling complex ripoptosome catalytic complex cellular anatomical structure intracellular anatomical structure cytoplasm cytosol cell periphery protein-containing complex plasma membrane protein complex membrane plasma membrane death-inducing signaling complex membrane protein complex CD95 death-inducing signaling complex ripoptosome catalytic complex cell body cytoplasmic side of plasma membrane cytoplasmic side of membrane side of membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR001309	Peptidase C14, p20 domain	Domain
A	IPR011600	Peptidase C14, caspase domain	Domain
A	IPR015917	Peptidase C14A, caspase catalytic domain	Domain
A	IPR011029	Death-like domain superfamily	Homologous Superfamily
A	IPR029030	Caspase-like domain superfamily	Homologous Superfamily
A	IPR001875	Death effector domain	Domain
A	IPR049634	FADD, vertebrates	Family
A	IPR000488	Death domain	Domain
A	IPR001875	Death effector domain	Domain
A	IPR016729	FAS-associated death domain protein	Family
A	IPR011029	Death-like domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: Q13158	myelodysplastic syndrome Lymphoma, Extranodal NK-T-Cell Hodgkins lymphoma leukemia non-small cell lung carcinoma spina bifida interstitial cystitis lung cancer adenoma amyotrophic lateral sclerosis breast cancer nodular lymphocyte predominant Hodgkin lymphoma dermatomyositis ovarian cancer glioblastoma myelodysplastic syndrome Lymphoma, Extranodal NK-T-Cell Hodgkins lymphoma leukemia non-small cell lung carcinoma spina bifida interstitial cystitis lung cancer adenoma amyotrophic lateral sclerosis breast cancer nodular lymphocyte predominant Hodgkin lymphoma dermatomyositis ovarian cancer glioblastoma pancreatic neoplasm prostate carcinoma Hodgkin's lymphoma, lymphocytic-histiocytic predominance sarcoidosis ulcerative colitis lung carcinoma malignant colon neoplasm adrenal cortex carcinoma malignant pancreatic neoplasm B-cell chronic lymphocytic leukemia cancer extranodal nasal NK/T cell lymphoma pancreatic ductal adenocarcinoma Pick disease psoriasis Hodgkin's lymphoma, mixed cellularity skin basal cell carcinoma Huntington disease lung adenocarcinoma malignant mesothelioma medulloblastoma bipolar disorder myopathy cutaneous lupus erythematosus osteosarcoma Gaucher disease pancreatic intraductal papillary-mucinous neoplasm pituitary cancer Hodgkin's lymphoma, lymphocytic depletion rheumatoid arthritis FADD-related immunodeficiency Neoplasm Metastasis coloboma pancreatic intraductal papillary-mucinous neoplasm oculootodental syndrome psoriasis glioblastoma ovarian cancer X-linked mixed deafness with perilymphatic gusher

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.