7LP2 | pdb_00007lp2

Structure of Nedd4L WW3 domain

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
E	SCOP2B Superfamily	WW domain	8067148	3001621	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	WW domain	8067148	3001621	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	WW domain	8067148	3001621	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
E	Hormone_recep	e7lp2E1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: Hormone_recep	ECOD (develop294)
C	DHDPS	e7lp2C1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: DHDPS	ECOD (develop294)
A	DHDPS	e7lp2A1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: DHDPS	ECOD (develop294)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, C, E	PF00397	WW domain (WW)	WW domain	The WW domain is a protein module with two highly conserved tryptophans that binds proline-rich peptide motifs in vitro.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B, D, F	Angiomotin	molecular transducer activity signaling receptor activity protein binding binding angiostatin binding	developmental process multicellular organismal process embryonic morphogenesis embryo development gastrulation multicellular organism development anatomical structure morphogenesis ameboidal-type cell migration anatomical structure development cell migration cellular process cell motility cell migration involved in gastrulation gastrulation with mouth forming second developmental process multicellular organismal process embryonic morphogenesis embryo development gastrulation multicellular organism development anatomical structure morphogenesis ameboidal-type cell migration anatomical structure development cell migration cellular process cell motility cell migration involved in gastrulation gastrulation with mouth forming second blood vessel morphogenesis tube development angiogenesis vasculature development circulatory system development tube morphogenesis anatomical structure formation involved in morphogenesis blood vessel development system development establishment of cell polarity establishment of cell polarity involved in ameboidal cell migration establishment or maintenance of cell polarity endothelial cell migration blood vessel endothelial cell migration cellular component organization organelle organization actin cytoskeleton organization actin filament-based process cellular component organization or biogenesis cytoskeleton organization regulation of biological process regulation of cell motility regulation of cellular process regulation of locomotion regulation of cell migration biological regulation locomotion cellular component biogenesis cell junction organization cellular component assembly cell junction assembly cell-cell junction assembly cell-cell junction organization negative regulation of vascular permeability regulation of vascular permeability system process circulatory system process vascular process in circulatory system regulation of biological quality blood circulation embryo development ending in birth or egg hatching chordate embryonic development in utero embryonic development chemotaxis response to stimulus taxis response to chemical response to external stimulus positive regulation of locomotion regulation of blood vessel endothelial cell migration positive regulation of biological process positive regulation of cell migration positive regulation of blood vessel endothelial cell migration positive regulation of endothelial cell migration positive regulation of cell motility regulation of endothelial cell migration positive regulation of cellular process cellular developmental process vasculogenesis cell differentiation cellular response to stimulus regulation of signaling small GTPase-mediated signal transduction signaling regulation of small GTPase mediated signal transduction regulation of signal transduction intracellular signal transduction cell communication regulation of intracellular signal transduction regulation of response to stimulus intracellular signaling cassette regulation of cell communication signal transduction regulation of embryonic development regulation of multicellular organismal development regulation of developmental process positive regulation of developmental process positive regulation of embryonic development positive regulation of multicellular organismal process regulation of multicellular organismal process positive regulation of cell size regulation of cellular component size regulation of cell size regulation of anatomical structure size negative regulation of biological process regulation of vasculature development regulation of anatomical structure morphogenesis negative regulation of blood vessel morphogenesis negative regulation of developmental process negative regulation of angiogenesis negative regulation of vasculature development regulation of angiogenesis negative regulation of multicellular organismal process RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process transcription by RNA polymerase II negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of transcription by RNA polymerase II negative regulation of DNA-templated transcription negative regulation of transcription by RNA polymerase II negative regulation of metabolic process primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process metabolic process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of DNA-templated transcription regulation of metabolic process negative regulation of RNA metabolic process regulation of cellular component organization regulation of modification of postsynaptic actin cytoskeleton regulation of modification of synaptic structure regulation of synapse organization modification of postsynaptic actin cytoskeleton regulation of synapse structure or activity regulation of modification of postsynaptic structure synapse organization modification of synaptic structure modification of postsynaptic structure localization macromolecule localization intracellular protein localization positive regulation of organelle organization regulation of cytoskeleton organization regulation of actin filament-based process positive regulation of cellular component organization regulation of actin filament bundle assembly positive regulation of actin filament bundle assembly actin filament bundle organization positive regulation of stress fiber assembly stress fiber assembly regulation of actin filament organization actomyosin structure organization positive regulation of cellular component biogenesis positive regulation of cytoskeleton organization actin filament organization regulation of cellular component biogenesis positive regulation of supramolecular fiber organization regulation of organelle organization regulation of stress fiber assembly contractile actin filament bundle assembly regulation of actomyosin structure organization regulation of actin cytoskeleton organization actin filament bundle assembly regulation of supramolecular fiber organization supramolecular fiber organization hippo signaling	cell projection cellular anatomical structure cell leading edge plasma membrane bounded cell projection lamellipodium cell periphery cell surface membrane plasma membrane external side of plasma membrane side of membrane intracellular anatomical structure cytoplasm cytosol cell projection cellular anatomical structure cell leading edge plasma membrane bounded cell projection lamellipodium cell periphery cell surface membrane plasma membrane external side of plasma membrane side of membrane intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle intracellular vesicle intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle organelle vesicle endocytic vesicle synapse cell junction glutamatergic synapse ruffle actin filament bundle intracellular membraneless organelle actin cytoskeleton actomyosin cytoskeleton membraneless organelle stress fiber contractile actin filament bundle postsynaptic density postsynapse neuron to neuron synapse postsynaptic specialization asymmetric synapse cell-cell junction apical junction complex bicellular tight junction tight junction anchoring junction polymeric cytoskeletal fiber actin filament supramolecular fiber supramolecular polymer supramolecular complex
A, C, E	E3 ubiquitin-protein ligase	molecular function inhibitor activity sodium channel inhibitor activity channel regulator activity transporter inhibitor activity ion channel regulator activity ion channel inhibitor activity molecular function regulator activity sodium channel regulator activity transporter regulator activity channel inhibitor activity potassium channel regulator activity potassium channel inhibitor activity aminoacyltransferase activity ubiquitin-like protein transferase activity molecular function inhibitor activity sodium channel inhibitor activity channel regulator activity transporter inhibitor activity ion channel regulator activity ion channel inhibitor activity molecular function regulator activity sodium channel regulator activity transporter regulator activity channel inhibitor activity potassium channel regulator activity potassium channel inhibitor activity aminoacyltransferase activity ubiquitin-like protein transferase activity catalytic activity, acting on a protein acyltransferase activity ubiquitin-like protein ligase activity ubiquitin protein ligase activity transferase activity catalytic activity ubiquitin-protein transferase activity protein binding binding transmembrane transporter binding	regulation of localization regulation of biological process regulation of protein localization biological regulation negative regulation of biological process localization negative regulation of protein localization to cell surface protein localization to cell surface macromolecule localization regulation of protein localization to cell surface intracellular protein localization negative regulation of protein localization import into cell receptor internalization regulation of localization regulation of biological process regulation of protein localization biological regulation negative regulation of biological process localization negative regulation of protein localization to cell surface protein localization to cell surface macromolecule localization regulation of protein localization to cell surface intracellular protein localization negative regulation of protein localization import into cell receptor internalization transport cellular process receptor-mediated endocytosis endocytosis establishment of localization vesicle-mediated transport membrane repolarization regulation of membrane repolarization regulation of biological quality regulation of membrane potential cellular component organization cell junction organization neuromuscular junction development synapse organization cellular component organization or biogenesis transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport regulation of potassium ion transport regulation of cellular process negative regulation of monoatomic ion transport potassium ion transmembrane transport negative regulation of transport regulation of monoatomic ion transmembrane transport metal ion transport negative regulation of transmembrane transport monoatomic cation transmembrane transport negative regulation of monoatomic ion transmembrane transport negative regulation of cellular process negative regulation of cation transmembrane transport monoatomic cation transport regulation of metal ion transport negative regulation of potassium ion transport regulation of transport regulation of monoatomic ion transport negative regulation of potassium ion transmembrane transport regulation of potassium ion transmembrane transport regulation of transmembrane transport potassium ion transport regulation of monoatomic cation transmembrane transport catabolic process positive regulation of protein metabolic process positive regulation of biological process macromolecule catabolic process regulation of primary metabolic process positive regulation of metabolic process positive regulation of macromolecule metabolic process protein metabolic process positive regulation of cellular process regulation of protein metabolic process primary metabolic process regulation of macromolecule metabolic process protein catabolic process regulation of catabolic process positive regulation of protein catabolic process positive regulation of catabolic process metabolic process macromolecule metabolic process regulation of metabolic process regulation of protein catabolic process regulation of cellular component organization regulation of synapse organization regulation of synapse structure or activity protein ubiquitination macromolecule modification post-translational protein modification protein modification process protein modification by small protein conjugation protein modification by small protein conjugation or removal regulation of membrane depolarization membrane depolarization proteasomal protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process ubiquitin-dependent protein catabolic process regulation of sodium ion import across plasma membrane sodium ion transmembrane transport regulation of sodium ion transport regulation of sodium ion transmembrane transport negative regulation of sodium ion import across plasma membrane import across plasma membrane sodium ion import across plasma membrane negative regulation of sodium ion transmembrane transport inorganic cation import across plasma membrane inorganic ion import across plasma membrane negative regulation of sodium ion transport sodium ion transport positive regulation of cellular component organization caveolin-mediated endocytosis positive regulation of endocytosis regulation of endocytosis regulation of vesicle-mediated transport positive regulation of transport positive regulation of caveolin-mediated endocytosis regulation of caveolin-mediated endocytosis regulation of protein stability protein polyubiquitination protein K48-linked ubiquitination regulation of neuron projection development multicellular organismal process regulation of developmental process cellular developmental process cell projection organization plasma membrane bounded cell projection morphogenesis cell development neuron projection development cell morphogenesis neurogenesis multicellular organism development cell projection morphogenesis neuron differentiation dendrite development neuron projection morphogenesis regulation of dendrite morphogenesis cell differentiation anatomical structure development regulation of anatomical structure morphogenesis system development developmental process plasma membrane bounded cell projection organization regulation of cell projection organization dendrite morphogenesis nervous system development cell morphogenesis involved in neuron differentiation generation of neurons anatomical structure morphogenesis regulation of dendrite development neuron development regulation of plasma membrane bounded cell projection organization export across plasma membrane potassium ion export across plasma membrane export from cell negative regulation of potassium ion export across plasma membrane regulation of potassium ion export across plasma membrane protein monoubiquitination regulation of growth developmental growth regulation of cell morphogenesis positive regulation of developmental process positive regulation of developmental growth developmental growth involved in morphogenesis positive regulation of dendrite extension cell growth dendrite extension neuron projection extension regulation of developmental growth developmental cell growth growth regulation of dendrite extension positive regulation of cell growth regulation of cell growth positive regulation of growth receptor catabolic process receptor metabolic process heart process cardiac muscle cell contraction system process cardiac muscle cell action potential involved in contraction ventricular cardiac muscle cell action potential action potential actin filament-based movement cardiac muscle contraction muscle contraction muscle system process striated muscle contraction circulatory system process actin filament-based process actin-mediated cell contraction heart contraction cardiac muscle cell action potential blood circulation	cell periphery cellular anatomical structure apical part of cell membrane plasma membrane plasma membrane region apical plasma membrane extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle extracellular space cell periphery cellular anatomical structure apical part of cell membrane plasma membrane plasma membrane region apical plasma membrane extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle extracellular space vesicle extracellular membrane-bounded organelle intracellular anatomical structure cytoplasm cytosol endosome intracellular vesicle intracellular membrane-bounded organelle endomembrane system intracellular organelle cytoplasmic vesicle late endosome multivesicular body nucleus membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen Golgi apparatus

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B, D, F	IPR024646	Angiomotin, C-terminal	Domain
B, D, F	IPR009114	Angiomotin	Family
B, D, F	IPR051747	Angiomotin-like	Family
A, C, E	IPR035983	HECT, E3 ligase catalytic domain	Homologous Superfamily
A, C, E	IPR036020	WW domain superfamily	Homologous Superfamily
A, C, E	IPR000008	C2 domain	Domain
A, C, E	IPR050409	E3 ubiquitin-protein ligase	Family
A, C, E	IPR000569	HECT domain	Domain
A, C, E	IPR024928	E3 ubiquitin-protein ligase, SMURF1 type	Family
A, C, E	IPR035892	C2 domain superfamily	Homologous Superfamily
A, C, E	IPR001202	WW domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
B, D, F	Pharos: Q4VCS5	Benign neoplasm of brain, unspecified brain cancer malignant mesothelioma
A, C, E	Pharos: Q96PU5	periventricular nodular heterotopia endometriosis hypertensive disorder periventricular nodular heterotopia 7 cleft palate lung cancer malignant ependymoma medulloblastoma non-syndromic syndactyly adrenal cortex carcinoma Periventricular Heterotopia, X-Linked atypical teratoid rhabdoid tumor pilocytic astrocytoma psoriasis ulcerative colitis periventricular nodular heterotopia endometriosis hypertensive disorder periventricular nodular heterotopia 7 cleft palate lung cancer malignant ependymoma medulloblastoma non-syndromic syndactyly adrenal cortex carcinoma Periventricular Heterotopia, X-Linked atypical teratoid rhabdoid tumor pilocytic astrocytoma psoriasis ulcerative colitis glioblastoma interstitial cystitis large cell medulloblastoma malignant glioma non-alcoholic fatty liver disease oligodendroglioma appendicitis breast cancer plasma cell myeloma cystic fibrosis spina bifida interstitial lung disease lung adenocarcinoma malignant colon neoplasm malignant mesothelioma non-small cell lung carcinoma ovarian cancer astrocytic tumor polysyndactyly 4 ductal breast carcinoma in situ syndactyly intellectual disability invasive ductal breast carcinoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.