7L92 | pdb_00007l92

C1B domain of Protein kinase C in complex with diacylglycerol and dodecyl 2-(trimethylammonio)ethyl phosphate

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
F [auth P]	SCOP2 Family	C1 domain	8107467	4003764	SCOP2 (2022-06-29)
F [auth P]	SCOP2 Superfamily	Cysteine-rich domain	8107468	3001452	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H [auth V]	LHC	e7l92V1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: LHC	ECOD (v295.2)
G [auth S]	LHC	e7l92S1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: LHC	ECOD (v295.2)
F [auth P]	LHC	e7l92P1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: LHC	ECOD (v295.2)
E [auth M]	LHC	e7l92M1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: LHC	ECOD (v295.2)
D [auth J]	LHC	e7l92J1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: LHC	ECOD (v295.2)
C [auth G]	LHC	e7l92G1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: LHC	ECOD (v295.2)
B [auth D]	LHC	e7l92D1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: LHC	ECOD (v295.2)
A	LHC	e7l92A1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: LHC	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B [auth D], C [auth G], D [auth J], E [auth M], A, B [auth D], C [auth G], D [auth J], E [auth M], F [auth P], G [auth S], H [auth V]	PF00130	Phorbol esters/diacylglycerol binding domain (C1 domain) (C1_1)	Phorbol esters/diacylglycerol binding domain (C1 domain)	This domain is also known as the Protein kinase C conserved region 1 (C1) domain.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B [auth D], C [auth G], D [auth J], E [auth M], A, B [auth D], C [auth G], D [auth J], E [auth M], F [auth P], G [auth S], H [auth V]	Protein kinase C delta type	protein serine/threonine kinase activity diacylglycerol-dependent serine/threonine kinase activity catalytic activity, acting on a protein kinase activity protein kinase activity diacylglycerol-dependent, calcium-independent serine/threonine kinase activity transferase activity catalytic activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups protein tyrosine kinase activity binding adenyl ribonucleotide binding nucleotide binding protein serine/threonine kinase activity diacylglycerol-dependent serine/threonine kinase activity catalytic activity, acting on a protein kinase activity protein kinase activity diacylglycerol-dependent, calcium-independent serine/threonine kinase activity transferase activity catalytic activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups protein tyrosine kinase activity binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding protein binding TIR domain binding protein domain specific binding enzyme regulator activity enzyme activator activity molecular function activator activity molecular function regulator activity kinase binding enzyme binding protein kinase binding protein tyrosine kinase activator activity kinase activator activity protein kinase activator activity protein kinase regulator activity kinase regulator activity insulin receptor substrate binding calcium,diacylglycerol-dependent serine/threonine kinase activity calcium-dependent protein serine/threonine kinase activity protein serine kinase activity protein serine/threonine kinase binding cation binding transition metal ion binding zinc ion binding metal ion binding	response to stimulus response to chemical response to xenobiotic stimulus regulation of biological process regulation of cellular process reactive oxygen species metabolic process biological regulation positive regulation of biological process regulation of superoxide metabolic process positive regulation of reactive oxygen species metabolic process superoxide metabolic process positive regulation of metabolic process superoxide anion generation metabolic process response to stimulus response to chemical response to xenobiotic stimulus regulation of biological process regulation of cellular process reactive oxygen species metabolic process biological regulation positive regulation of biological process regulation of superoxide metabolic process positive regulation of reactive oxygen species metabolic process superoxide metabolic process positive regulation of metabolic process superoxide anion generation metabolic process cellular process positive regulation of superoxide anion generation regulation of superoxide anion generation regulation of metabolic process regulation of reactive oxygen species metabolic process positive regulation of cellular process cellular response to stimulus positive regulation of cell communication positive regulation of signal transduction signaling regulation of signal transduction regulation of programmed cell death positive regulation of apoptotic signaling pathway cell communication positive regulation of response to stimulus signal transduction regulation of signaling positive regulation of programmed cell death regulation of apoptotic process cell death positive regulation of apoptotic process apoptotic signaling pathway regulation of response to stimulus regulation of cell communication apoptotic process programmed cell death positive regulation of signaling regulation of apoptotic signaling pathway intracellular signal transduction phospholipase C/protein kinase C signal transduction intracellular signaling cassette multicellular organismal process regulation of body fluid levels negative regulation of biological process regulation of cell activation negative regulation of cell adhesion negative regulation of platelet activation regulation of coagulation regulation of biological quality response to wounding negative regulation of homotypic cell-cell adhesion negative regulation of wound healing negative regulation of blood coagulation response to external stimulus blood coagulation negative regulation of hemostasis regulation of platelet activation negative regulation of response to external stimulus negative regulation of cell-cell adhesion regulation of wound healing negative regulation of multicellular organismal process platelet activation regulation of response to external stimulus homotypic cell-cell adhesion regulation of response to wounding cell adhesion cell-cell adhesion response to stress regulation of response to stress negative regulation of cellular process coagulation regulation of cell-cell adhesion regulation of multicellular organismal process regulation of hemostasis wound healing negative regulation of response to stimulus regulation of homotypic cell-cell adhesion regulation of cell adhesion regulation of blood coagulation hemostasis cell activation negative regulation of platelet aggregation negative regulation of response to wounding platelet aggregation negative regulation of cell activation regulation of platelet aggregation negative regulation of coagulation defense response to bacterium biological process involved in interspecies interaction between organisms response to other organism defense response response to bacterium response to external biotic stimulus response to biotic stimulus regulation of cellular response to stress regulation of primary metabolic process nucleobase-containing compound metabolic process positive regulation of DNA repair cellular response to stress positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process DNA repair primary metabolic process DNA metabolic process regulation of macromolecule metabolic process nucleic acid metabolic process regulation of DNA repair positive regulation of DNA metabolic process DNA damage response macromolecule metabolic process regulation of DNA metabolic process response to oxidative stress cellular response to chemical stimulus cellular response to oxidative stress cellular response to chemical stress protein phosphorylation phosphorylation macromolecule modification phosphate-containing compound metabolic process protein metabolic process protein modification process regulation of glial cell apoptotic process negative regulation of programmed cell death negative regulation of glial cell apoptotic process glial cell apoptotic process negative regulation of apoptotic process response to phorbol 13-acetate 12-myristate response to ketone response to lipid response to alcohol response to oxygen-containing compound response to hydrogen peroxide response to reactive oxygen species regulation of localization regulation of transport transport positive regulation of phospholipid scramblase activity establishment of localization positive regulation of molecular function regulation of molecular function localization positive regulation of transport positive regulation of transporter activity cellular response to oxygen-containing compound response to hydroperoxide cellular response to hydroperoxide regulation of cytoskeleton organization regulation of cellular component organization regulation of actin filament-based process actin cytoskeleton organization regulation of organelle organization cellular component organization organelle organization regulation of actin cytoskeleton organization actin filament-based process cellular component organization or biogenesis cytoskeleton organization neutrophil activation immune system process myeloid leukocyte activation granulocyte activation leukocyte activation sphingolipid biosynthetic process regulation of lipid metabolic process lipid biosynthetic process cellular component biogenesis regulation of sphingolipid biosynthetic process regulation of ceramide biosynthetic process regulation of biosynthetic process ceramide metabolic process sphingolipid metabolic process regulation of cellular component biogenesis macromolecule biosynthetic process biosynthetic process ceramide biosynthetic process regulation of macromolecule biosynthetic process regulation of lipid biosynthetic process lipid metabolic process regulation of defense response negative regulation of inflammatory response regulation of inflammatory response negative regulation of defense response inflammatory response import into cell nitrogen compound transport carboxylic acid transport carboxylic acid transmembrane transport aspartate transmembrane transport import across plasma membrane amino acid transmembrane transport C4-dicarboxylate transport D-amino acid transport organic acid transport amino acid transport transmembrane transport acidic amino acid transport D-aspartate transmembrane transport D-aspartate import across plasma membrane dicarboxylic acid transport amino acid import across plasma membrane negative regulation of signaling termination of signal transduction negative regulation of signal transduction negative regulation of cell communication response to hexose response to monosaccharide response to carbohydrate response to glucose regulation of cellular component size regulation of protein-containing complex assembly cellular component assembly protein-containing complex assembly negative regulation of protein polymerization regulation of actin filament polymerization negative regulation of supramolecular fiber organization negative regulation of actin filament polymerization protein polymerization actin polymerization or depolymerization regulation of actin filament organization actin filament polymerization negative regulation of cellular component organization protein-containing complex organization negative regulation of cytoskeleton organization regulation of actin polymerization or depolymerization actin filament organization negative regulation of protein-containing complex assembly negative regulation of organelle organization regulation of protein polymerization regulation of actin filament length regulation of supramolecular fiber organization supramolecular fiber organization regulation of anatomical structure size cell population proliferation B cell activation B cell proliferation lymphocyte activation leukocyte proliferation mononuclear cell proliferation lymphocyte proliferation negative regulation of intracellular signal transduction regulation of intracellular signal transduction regulation of MAPK cascade MAPK cascade negative regulation of MAPK cascade positive regulation of phosphorylation regulation of catalytic activity regulation of transferase activity positive regulation of phosphate metabolic process regulation of MAP kinase activity positive regulation of protein serine/threonine kinase activity positive regulation of protein phosphorylation positive regulation of MAP kinase activity positive regulation of MAPK cascade regulation of protein metabolic process positive regulation of intracellular signal transduction positive regulation of kinase activity regulation of kinase activity regulation of protein serine/threonine kinase activity regulation of protein modification process regulation of protein phosphorylation positive regulation of protein metabolic process positive regulation of protein modification process positive regulation of protein kinase activity positive regulation of catalytic activity regulation of protein kinase activity regulation of phosphorylation collagen metabolic process protein kinase C signaling cellular response to nitrogen compound response to endogenous stimulus response to peptide hormone cellular response to peptide hormone stimulus response to nitrogen compound cellular response to endogenous stimulus response to hormone response to insulin cellular response to insulin stimulus cellular response to hormone stimulus positive regulation of ceramide biosynthetic process positive regulation of sphingolipid biosynthetic process positive regulation of biosynthetic process positive regulation of lipid metabolic process positive regulation of lipid biosynthetic process adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains lymphocyte mediated immunity immune response B cell mediated immunity leukocyte mediated immunity immunoglobulin mediated immune response adaptive immune response immune effector process hexose transmembrane transport regulation of D-glucose import across plasma membrane carbohydrate import across plasma membrane carbohydrate transport positive regulation of D-glucose transmembrane transport hexose import across plasma membrane positive regulation of transmembrane transport positive regulation of D-glucose import across plasma membrane regulation of transmembrane transport D-glucose import across plasma membrane D-glucose transmembrane transport regulation of D-glucose transmembrane transport monosaccharide transmembrane transport carbohydrate transmembrane transport cellular response to nutrient levels response to nutrient levels response to starvation cellular response to glucose starvation cellular response to starvation peptidyl-threonine phosphorylation cellular senescence establishment of protein localization cellular localization regulation of protein localization nucleocytoplasmic transport positive regulation of nucleocytoplasmic transport nuclear transport positive regulation of establishment of protein localization regulation of protein localization to nucleus positive regulation of protein transport import into nucleus regulation of protein import into nucleus establishment of localization in cell protein import into nucleus positive regulation of intracellular transport intracellular protein localization regulation of intracellular transport positive regulation of protein localization to nucleus regulation of establishment of protein localization positive regulation of protein import into nucleus intracellular transport regulation of nucleocytoplasmic transport protein localization to nucleus regulation of protein transport establishment of protein localization to organelle protein transport regulation of cellular localization macromolecule localization protein localization to organelle positive regulation of protein localization regulation of intracellular protein transport positive regulation of intracellular protein transport intracellular protein transport sphingolipid catabolic process catabolic process sphingomyelin catabolic process phospholipid catabolic process organophosphate catabolic process regulation of sphingomyelin catabolic process positive regulation of phospholipid catabolic process phospholipid metabolic process positive regulation of lipid catabolic process phosphorus metabolic process sphingomyelin metabolic process regulation of phospholipid catabolic process lipid catabolic process positive regulation of phosphorus metabolic process positive regulation of sphingomyelin catabolic process regulation of phospholipid metabolic process regulation of catabolic process regulation of lipid catabolic process positive regulation of phospholipid metabolic process positive regulation of catabolic process organophosphate metabolic process regulation of phosphorus metabolic process protein autophosphorylation insulin receptor signaling pathway regulation of cellular response to insulin stimulus cell surface receptor protein tyrosine kinase signaling pathway enzyme-linked receptor protein signaling pathway cell surface receptor signaling pathway regulation of insulin receptor signaling pathway negative regulation of cellular response to insulin stimulus negative regulation of insulin receptor signaling pathway filopodium assembly cell projection organization negative regulation of filopodium assembly regulation of filopodium assembly plasma membrane bounded cell projection assembly negative regulation of plasma membrane bounded cell projection assembly negative regulation of cell projection organization plasma membrane bounded cell projection organization regulation of cell projection organization regulation of cell projection assembly regulation of plasma membrane bounded cell projection assembly cell projection assembly regulation of plasma membrane bounded cell projection organization cell chemotaxis chemotaxis taxis cell migration cell motility locomotion response to decreased oxygen levels response to hypoxia response to oxygen levels response to abiotic stimulus peptidyl-serine phosphorylation response to acid chemical response to amino acid glycolipid metabolic process carbohydrate derivative metabolic process regulation of glucosylceramide catabolic process ceramide catabolic process glycosylceramide metabolic process carbohydrate derivative catabolic process positive regulation of glucosylceramide catabolic process glycosphingolipid catabolic process glycosphingolipid metabolic process liposaccharide metabolic process glucosylceramide metabolic process glycosylceramide catabolic process glycolipid catabolic process glucosylceramide catabolic process response to ethanol cellular response to hydrogen peroxide cellular response to reactive oxygen species response to mechanical stimulus response to light stimulus cellular response to radiation response to UV cellular response to environmental stimulus cellular response to light stimulus response to radiation cellular response to abiotic stimulus cellular response to UV response to angiotensin cellular response to angiotensin	cell-cell junction cellular anatomical structure anchoring junction cell junction intracellular anatomical structure cytoplasm cytosol cell periphery plasma membrane membrane membrane-bounded organelle intracellular organelle Golgi apparatus organelle cell-cell junction cellular anatomical structure anchoring junction cell junction intracellular anatomical structure cytoplasm cytosol cell periphery plasma membrane membrane membrane-bounded organelle intracellular organelle Golgi apparatus organelle intracellular membrane-bounded organelle endomembrane system perinuclear region of cytoplasm mitochondrion nucleus membrane-enclosed lumen intracellular organelle lumen organelle lumen nuclear lumen nuclear matrix endosome intracellular vesicle lytic vacuole vacuole endolysosome cytoplasmic vesicle vesicle lysosome endoplasmic reticulum postsynapse synapse postsynaptic cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B [auth D], C [auth G], D [auth J], E [auth M], A, B [auth D], C [auth G], D [auth J], E [auth M], F [auth P], G [auth S], H [auth V]	IPR020454	Diacylglycerol/phorbol-ester binding	Domain
A, B [auth D], C [auth G], D [auth J], E [auth M], A, B [auth D], C [auth G], D [auth J], E [auth M], F [auth P], G [auth S], H [auth V]	IPR014376	Protein kinase C, delta/epsilon/eta/theta types	Family
A, B [auth D], C [auth G], D [auth J], E [auth M], A, B [auth D], C [auth G], D [auth J], E [auth M], F [auth P], G [auth S], H [auth V]	IPR000719	Protein kinase domain	Domain
A, B [auth D], C [auth G], D [auth J], E [auth M], A, B [auth D], C [auth G], D [auth J], E [auth M], F [auth P], G [auth S], H [auth V]	IPR017892	Protein kinase, C-terminal	Domain
A, B [auth D], C [auth G], D [auth J], E [auth M], A, B [auth D], C [auth G], D [auth J], E [auth M], F [auth P], G [auth S], H [auth V]	IPR017441	Protein kinase, ATP binding site	Binding Site
A, B [auth D], C [auth G], D [auth J], E [auth M], A, B [auth D], C [auth G], D [auth J], E [auth M], F [auth P], G [auth S], H [auth V]	IPR002219	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	Domain
A, B [auth D], C [auth G], D [auth J], E [auth M], A, B [auth D], C [auth G], D [auth J], E [auth M], F [auth P], G [auth S], H [auth V]	IPR046349	C1-like domain superfamily	Homologous Superfamily
A, B [auth D], C [auth G], D [auth J], E [auth M], A, B [auth D], C [auth G], D [auth J], E [auth M], F [auth P], G [auth S], H [auth V]	IPR008271	Serine/threonine-protein kinase, active site	Active Site
A, B [auth D], C [auth G], D [auth J], E [auth M], A, B [auth D], C [auth G], D [auth J], E [auth M], F [auth P], G [auth S], H [auth V]	IPR000008	C2 domain	Domain
A, B [auth D], C [auth G], D [auth J], E [auth M], A, B [auth D], C [auth G], D [auth J], E [auth M], F [auth P], G [auth S], H [auth V]	IPR000961	AGC-kinase, C-terminal	Domain
A, B [auth D], C [auth G], D [auth J], E [auth M], A, B [auth D], C [auth G], D [auth J], E [auth M], F [auth P], G [auth S], H [auth V]	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily
A, B [auth D], C [auth G], D [auth J], E [auth M], A, B [auth D], C [auth G], D [auth J], E [auth M], F [auth P], G [auth S], H [auth V]	IPR035892	C2 domain superfamily	Homologous Superfamily
A, B [auth D], C [auth G], D [auth J], E [auth M], A, B [auth D], C [auth G], D [auth J], E [auth M], F [auth P], G [auth S], H [auth V]	IPR027436	Protein kinase C, delta	Family

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A, B [auth D], C [auth G], D [auth J], E [auth M] A, B [auth D], C [auth G], D [auth J], E [auth M], F [auth P], G [auth S], H [auth V]	OPM	Monotopic/peripheral	All beta monotopic/peripheral	C1 domain	C1 domain

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.