7L04
Crystal Structure of Adeno-Associated Virus Porcine Origin capsid protein in complex with Importin-alpha 2
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth E] | d7l04e_ | All alpha proteins | alpha-alpha superhelix | ARM repeat | automated matches | automated matches | Mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth E] | SCOP2B Superfamily | ARM repeat-like | 8039556 | 3000116 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth E] | PF00514,PF16186 | e7l04E1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF00514,PF16186 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
B [auth E] | PF00514 | Armadillo/beta-catenin-like repeat (Arm) | Armadillo/beta-catenin-like repeat | - | Repeat |
B [auth E] | PF01749 | Importin beta binding domain (IBB) | Importin beta binding domain | - | Repeat |
B [auth E] | PF16186 | Atypical Arm repeat (Arm_3) | Atypical Arm repeat | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth C] | IPR013607 | Phospholipase A2-like domain | Domain |
A [auth C] | IPR016184 | Capsid/spike protein, ssDNA virus | Homologous Superfamily |
A [auth C] | IPR036952 | Parvovirus coat protein VP1/VP2 | Homologous Superfamily |
A [auth C] | IPR001403 | Parvovirus coat protein VP2 | Domain |
B [auth E] | IPR016024 | Armadillo-type fold | Homologous Superfamily |
B [auth E] | IPR000225 | Armadillo | Repeat |
B [auth E] | IPR011989 | Armadillo-like helical | Homologous Superfamily |
B [auth E] | IPR024931 | Importin subunit alpha | Family |
B [auth E] | IPR036975 | Importin-alpha, importin-beta-binding domain superfamily | Homologous Superfamily |
B [auth E] | IPR002652 | Importin-alpha, importin-beta-binding domain | Domain |
B [auth E] | IPR032413 | Atypical Arm repeat | Repeat |